RNA–Protein interactions for RNA: ENST00000340666.5

SYN1-202, Transcript of synapsin I, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1-202ENST00000340666 DLC1Q96QB1 1528 aa20.18■□□□□ 0.82
SYN1-202ENST00000340666 REREQ9P2R6 1566 aa20.18■□□□□ 0.82
SYN1-202ENST00000340666 GSE1Q14687 1217 aa20.18■□□□□ 0.82
SYN1-202ENST00000340666 MVPQ14764 893 aaKnown RBP20.18■□□□□ 0.82
SYN1-202ENST00000340666 SEC24BO95487 1268 aa20.17■□□□□ 0.82
SYN1-202ENST00000340666 TRIM35Q9UPQ4 493 aa20.17■□□□□ 0.82
SYN1-202ENST00000340666 TMPOP42166 694 aaKnown RBP20.15■□□□□ 0.82
SYN1-202ENST00000340666 FYB1O15117 783 aa20.15■□□□□ 0.82
SYN1-202ENST00000340666 RWDD1Q9H446 243 aaPredicted RBP20.15■□□□□ 0.82
SYN1-202ENST00000340666 ZKSCAN2Q63HK3 967 aa20.14■□□□□ 0.82
SYN1-202ENST00000340666 PDZRN3Q9UPQ7 1066 aa20.14■□□□□ 0.82
SYN1-202ENST00000340666 RIMBP3CA6NJZ7 1639 aa20.14■□□□□ 0.81
SYN1-202ENST00000340666 RIMBP3BA6NNM3 1639 aa20.14■□□□□ 0.81
SYN1-202ENST00000340666 RIMBP3Q9UFD9 1639 aa20.14■□□□□ 0.81
SYN1-202ENST00000340666 TERF2IPQ9NYB0 399 aa20.13■□□□□ 0.81
SYN1-202ENST00000340666 BCL2L13Q9BXK5 485 aa20.13■□□□□ 0.81
SYN1-202ENST00000340666 DZIP1LQ8IYY4 767 aaKnown RBP20.12■□□□□ 0.81
SYN1-202ENST00000340666 SRPK2P78362 688 aaKnown RBP20.11■□□□□ 0.81
SYN1-202ENST00000340666 AGLP35573 1532 aa20.11■□□□□ 0.81
SYN1-202ENST00000340666 LRRC7Q96NW7 1537 aa20.11■□□□□ 0.81
SYN1-202ENST00000340666 GGNBP2Q9H3C7 697 aa20.11■□□□□ 0.81
SYN1-202ENST00000340666 ATP7BP35670 1465 aa20.11■□□□□ 0.81
SYN1-202ENST00000340666 HDAC1Q13547 482 aaPredicted RBP20.1■□□□□ 0.81
SYN1-202ENST00000340666 PRAM1Q96QH2 718 aa20.1■□□□□ 0.81
SYN1-202ENST00000340666 TBC1D32Q96NH3 1257 aa20.09■□□□□ 0.81
SYN1-202ENST00000340666 SPATA31D1Q6ZQQ2 1576 aa20.09■□□□□ 0.81
SYN1-202ENST00000340666 PPIP5K1Q6PFW1 1433 aa20.09■□□□□ 0.81
SYN1-202ENST00000340666 EXOSC9Q06265 439 aaKnown RBP20.09■□□□□ 0.81
SYN1-202ENST00000340666 TSR2Q969E8 191 aaKnown RBP20.09■□□□□ 0.81
SYN1-202ENST00000340666 SAFB2Q14151 953 aaKnown RBP eCLIP20.08■□□□□ 0.81
SYN1-202ENST00000340666 STK26Q9P289 416 aa20.08■□□□□ 0.81
SYN1-202ENST00000340666 FRAT2O75474 233 aaPredicted RBP20.08■□□□□ 0.8
SYN1-202ENST00000340666 FAM135BQ49AJ0 1406 aa20.08■□□□□ 0.8
SYN1-202ENST00000340666 TRIM27P14373 513 aa20.07■□□□□ 0.8
SYN1-202ENST00000340666 MINK1Q8N4C8 1332 aaPredicted RBP20.06■□□□□ 0.8
SYN1-202ENST00000340666 BECN1Q14457 450 aa20.06■□□□□ 0.8
SYN1-202ENST00000340666 SSH1Q8WYL5 1049 aa20.06■□□□□ 0.8
SYN1-202ENST00000340666 PNNQ9H307 717 aaKnown RBP20.06■□□□□ 0.8
SYN1-202ENST00000340666 MAP2P11137 1827 aaKnown RBP20.05■□□□□ 0.8
SYN1-202ENST00000340666 ATF7IPQ6VMQ6 1270 aa20.05■□□□□ 0.8
SYN1-202ENST00000340666 DDX19BQ9UMR2 479 aa20.05■□□□□ 0.8
SYN1-202ENST00000340666 U2SURPO15042 1029 aaKnown RBP20.05■□□□□ 0.8
SYN1-202ENST00000340666 DIAPH1O60610 1272 aaKnown RBP20.05■□□□□ 0.8
SYN1-202ENST00000340666 HDGFL2Q7Z4V5 671 aaPredicted RBP20.05■□□□□ 0.8
SYN1-202ENST00000340666 FTSJ3Q8IY81 847 aaKnown RBP20.05■□□□□ 0.8
SYN1-202ENST00000340666 SMC4Q9NTJ3 1288 aa20.05■□□□□ 0.8
SYN1-202ENST00000340666 NRXN3Q9Y4C0 1643 aa20.05■□□□□ 0.8
SYN1-202ENST00000340666 A2ML1A8K2U0 1454 aa20.04■□□□□ 0.8
SYN1-202ENST00000340666 BRPF1P55201 1214 aaPredicted RBP20.04■□□□□ 0.8
SYN1-202ENST00000340666 ANTXR1Q9H6X2 564 aa20.04■□□□□ 0.8
SYN1-202ENST00000340666 CDK19Q9BWU1 502 aa20.04■□□□□ 0.8
SYN1-202ENST00000340666 KNDC1Q76NI1 1749 aa20.04■□□□□ 0.8
SYN1-202ENST00000340666 ALDH1L2Q3SY69 923 aa20.03■□□□□ 0.8
SYN1-202ENST00000340666 POGKQ9P215 609 aa20.03■□□□□ 0.8
SYN1-202ENST00000340666 FCHSD2O94868 740 aa20.02■□□□□ 0.8
SYN1-202ENST00000340666 SMC5Q8IY18 1101 aa20.02■□□□□ 0.8
SYN1-202ENST00000340666 PPP6R1Q9UPN7 881 aa20.02■□□□□ 0.8
SYN1-202ENST00000340666 MON2Q7Z3U7 1717 aa20.02■□□□□ 0.79
SYN1-202ENST00000340666 RIPK4P57078 832 aa20.01■□□□□ 0.79
SYN1-202ENST00000340666 KIF16BQ96L93 1317 aa20.01■□□□□ 0.79
SYN1-202ENST00000340666 UPF2Q9HAU5 1272 aaKnown RBP20.01■□□□□ 0.79
SYN1-202ENST00000340666 DIP2BQ9P265 1576 aa20.01■□□□□ 0.79
SYN1-202ENST00000340666 CPSF1Q10570 1443 aaKnown RBP20■□□□□ 0.79
SYN1-202ENST00000340666 RSPH6AQ9H0K4 717 aa20■□□□□ 0.79
SYN1-202ENST00000340666 ZBTB40Q9NUA8 1239 aa20■□□□□ 0.79
SYN1-202ENST00000340666 NOB1Q9ULX3 412 aaKnown RBP20■□□□□ 0.79
SYN1-202ENST00000340666 FBXO31Q5XUX0 539 aaPredicted RBP20■□□□□ 0.79
SYN1-202ENST00000340666 ZNF428Q96B54 188 aa19.99■□□□□ 0.79
SYN1-202ENST00000340666 CABP1Q9NZU7 370 aa19.99■□□□□ 0.79
SYN1-202ENST00000340666 AKAP12Q02952 1782 aa19.99■□□□□ 0.79
SYN1-202ENST00000340666 CDK12Q9NYV4 1490 aaPredicted RBP19.98■□□□□ 0.79
SYN1-202ENST00000340666 PIK3R4Q99570 1358 aa19.98■□□□□ 0.79
SYN1-202ENST00000340666 TMEM57Q8N5G2 664 aa19.97■□□□□ 0.79
SYN1-202ENST00000340666 POLKQ9UBT6 870 aa19.97■□□□□ 0.79
SYN1-202ENST00000340666 DLG5Q8TDM6 1919 aa19.97■□□□□ 0.79
SYN1-202ENST00000340666 EDC4Q6P2E9 1401 aaKnown RBP19.97■□□□□ 0.79
SYN1-202ENST00000340666 TBC1D2Q9BYX2 928 aa19.97■□□□□ 0.79
SYN1-202ENST00000340666 PTCH1Q13635 1447 aa19.96■□□□□ 0.79
SYN1-202ENST00000340666 RIMS2Q9UQ26 1411 aa19.96■□□□□ 0.79
SYN1-202ENST00000340666 IPO8O15397 1037 aaKnown RBP19.96■□□□□ 0.79
SYN1-202ENST00000340666 C3P01024 1663 aa19.95■□□□□ 0.78
SYN1-202ENST00000340666 ITPRIPQ8IWB1 547 aa19.95■□□□□ 0.78
SYN1-202ENST00000340666 AATKQ6ZMQ8 1374 aa19.95■□□□□ 0.78
SYN1-202ENST00000340666 NRKQ7Z2Y5 1582 aa19.94■□□□□ 0.78
SYN1-202ENST00000340666 ITSN1Q15811 1721 aa19.92■□□□□ 0.78
SYN1-202ENST00000340666 NUCB1Q02818 461 aa19.92■□□□□ 0.78
SYN1-202ENST00000340666 CPS1P31327 1500 aa19.92■□□□□ 0.78
SYN1-202ENST00000340666 NFE2L2Q16236 605 aa19.92■□□□□ 0.78
SYN1-202ENST00000340666 TECPR2O15040 1411 aa19.92■□□□□ 0.78
SYN1-202ENST00000340666 PRKAR2BP31323 418 aa19.91■□□□□ 0.78
SYN1-202ENST00000340666 ARHGAP45Q92619 1136 aa19.91■□□□□ 0.78
SYN1-202ENST00000340666 ZNF853P0CG23 659 aa19.91■□□□□ 0.78
SYN1-202ENST00000340666 IL13P35225 146 aa19.9■□□□□ 0.78
SYN1-202ENST00000340666 C22orf23Q9BZE7 217 aa19.9■□□□□ 0.78
SYN1-202ENST00000340666 CALD1Q05682 793 aaKnown RBP19.88■□□□□ 0.77
SYN1-202ENST00000340666 MRPL50Q8N5N7 158 aaKnown RBP19.88■□□□□ 0.77
SYN1-202ENST00000340666 IFT57Q9NWB7 429 aa19.88■□□□□ 0.77
SYN1-202ENST00000340666 NCOA3Q9Y6Q9 1424 aa19.88■□□□□ 0.77
SYN1-202ENST00000340666 EIF5BO60841 1220 aaKnown RBP19.88■□□□□ 0.77
SYN1-202ENST00000340666 VAMP4O75379 141 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms