RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 CDK19Q9BWU1 502 aa18.07■□□□□ 0.48
CPSF7-201ENST00000340437 MYOM2P54296 1465 aa18.06■□□□□ 0.48
CPSF7-201ENST00000340437 PLEKHF1Q96S99 279 aa18.06■□□□□ 0.48
CPSF7-201ENST00000340437 RBM42Q9BTD8 480 aaKnown RBP18.06■□□□□ 0.48
CPSF7-201ENST00000340437 FAM43AQ8N2R8 423 aa18.05■□□□□ 0.48
CPSF7-201ENST00000340437 TSPYL6Q8N831 410 aa18.05■□□□□ 0.48
CPSF7-201ENST00000340437 PHACTR3Q96KR7 559 aa18.05■□□□□ 0.48
CPSF7-201ENST00000340437 NAP1L5Q96NT1 182 aaPredicted RBP18.05■□□□□ 0.48
CPSF7-201ENST00000340437 KIF1BO60333 1816 aa18.05■□□□□ 0.48
CPSF7-201ENST00000340437 DCTN1Q14203 1278 aa18.04■□□□□ 0.48
CPSF7-201ENST00000340437 CHD1LQ86WJ1 897 aa18.04■□□□□ 0.48
CPSF7-201ENST00000340437 SHROOM2Q13796 1616 aa18.04■□□□□ 0.48
CPSF7-201ENST00000340437 ZBTB40Q9NUA8 1239 aa18.04■□□□□ 0.48
CPSF7-201ENST00000340437 SBNO2Q9Y2G9 1366 aa18.03■□□□□ 0.48
CPSF7-201ENST00000340437 ZBTB7CA1YPR0 619 aa18.03■□□□□ 0.48
CPSF7-201ENST00000340437 ZRANB1Q9UGI0 708 aa18.03■□□□□ 0.48
CPSF7-201ENST00000340437 EMILIN1Q9Y6C2 1016 aa18.03■□□□□ 0.48
CPSF7-201ENST00000340437 NLRP1Q9C000 1473 aa18.02■□□□□ 0.48
CPSF7-201ENST00000340437 HDAC1Q13547 482 aaPredicted RBP18.02■□□□□ 0.48
CPSF7-201ENST00000340437 MROH2AA6NES4 1674 aa18.02■□□□□ 0.48
CPSF7-201ENST00000340437 CD109Q6YHK3 1445 aa18.02■□□□□ 0.48
CPSF7-201ENST00000340437 FAM83GA6ND36 823 aa18.02■□□□□ 0.47
CPSF7-201ENST00000340437 KIF16BQ96L93 1317 aa18.01■□□□□ 0.47
CPSF7-201ENST00000340437 RPGRIP1LQ68CZ1 1315 aa18.01■□□□□ 0.47
CPSF7-201ENST00000340437 NCLP19338 710 aaKnown RBP18.01■□□□□ 0.47
CPSF7-201ENST00000340437 UHRF1BP1LA0JNW5 1464 aa18■□□□□ 0.47
CPSF7-201ENST00000340437 SMC5Q8IY18 1101 aa18■□□□□ 0.47
CPSF7-201ENST00000340437 RRS1Q15050 365 aaKnown RBP18■□□□□ 0.47
CPSF7-201ENST00000340437 EFCAB6Q5THR3 1501 aa18■□□□□ 0.47
CPSF7-201ENST00000340437 ATAD2Q6PL18 1390 aa18■□□□□ 0.47
CPSF7-201ENST00000340437 IQSEC2Q5JU85 1478 aa17.99■□□□□ 0.47
CPSF7-201ENST00000340437 PPRC1Q5VV67 1664 aaKnown RBP17.99■□□□□ 0.47
CPSF7-201ENST00000340437 NCKAP5LQ9HCH0 1330 aa17.99■□□□□ 0.47
CPSF7-201ENST00000340437 NUCB1Q02818 461 aa17.99■□□□□ 0.47
CPSF7-201ENST00000340437 CT47B1P0C2W7 299 aaPredicted RBP17.97■□□□□ 0.47
CPSF7-201ENST00000340437 TNPO1Q92973 898 aaKnown RBP17.97■□□□□ 0.47
CPSF7-201ENST00000340437 PNNQ9H307 717 aaKnown RBP17.97■□□□□ 0.47
CPSF7-201ENST00000340437 CD2BP2O95400 341 aaKnown RBP17.97■□□□□ 0.47
CPSF7-201ENST00000340437 NME9Q86XW9 330 aa17.96■□□□□ 0.47
CPSF7-201ENST00000340437 QRICH2Q9H0J4 1663 aa17.96■□□□□ 0.47
CPSF7-201ENST00000340437 SHPRHQ149N8 1683 aa17.96■□□□□ 0.47
CPSF7-201ENST00000340437 POLKQ9UBT6 870 aa17.96■□□□□ 0.47
CPSF7-201ENST00000340437 C14orf37Q86TY3 774 aa17.95■□□□□ 0.46
CPSF7-201ENST00000340437 KRT24Q2M2I5 525 aa17.95■□□□□ 0.46
CPSF7-201ENST00000340437 TWISTNBQ3B726 338 aaPredicted RBP17.95■□□□□ 0.46
CPSF7-201ENST00000340437 FOXD4L5Q5VV16 416 aaPredicted RBP17.95■□□□□ 0.46
CPSF7-201ENST00000340437 C16orf71Q8IYS4 520 aaPredicted RBP17.95■□□□□ 0.46
CPSF7-201ENST00000340437 FOXD4L4Q8WXT5 416 aaPredicted RBP17.95■□□□□ 0.46
CPSF7-201ENST00000340437 INO80Q9ULG1 1556 aaPredicted RBP17.95■□□□□ 0.46
CPSF7-201ENST00000340437 DEPDC5O75140 1603 aa17.94■□□□□ 0.46
CPSF7-201ENST00000340437 MROH1Q8NDA8 1641 aa17.94■□□□□ 0.46
CPSF7-201ENST00000340437 FCHSD2O94868 740 aa17.94■□□□□ 0.46
CPSF7-201ENST00000340437 TBC1D9Q6ZT07 1266 aa17.94■□□□□ 0.46
CPSF7-201ENST00000340437 C8orf58Q8NAV2 365 aa17.94■□□□□ 0.46
CPSF7-201ENST00000340437 RSPH6AQ9H0K4 717 aa17.94■□□□□ 0.46
CPSF7-201ENST00000340437 MBIPQ9NS73 344 aa17.94■□□□□ 0.46
CPSF7-201ENST00000340437 VWDEQ8N2E2 1590 aa17.94■□□□□ 0.46
CPSF7-201ENST00000340437 VAMP4O75379 141 aa17.93■□□□□ 0.46
CPSF7-201ENST00000340437 TRIM44Q96DX7 344 aaPredicted RBP17.93■□□□□ 0.46
CPSF7-201ENST00000340437 KIAA1210Q9ULL0 1709 aa17.93■□□□□ 0.46
CPSF7-201ENST00000340437 DDX11L8A8MPP1 907 aa17.93■□□□□ 0.46
CPSF7-201ENST00000340437 ZBTB7BO15156 539 aaPredicted RBP17.93■□□□□ 0.46
CPSF7-201ENST00000340437 TPRNQ4KMQ1 711 aa17.93■□□□□ 0.46
CPSF7-201ENST00000340437 TULP4Q9NRJ4 1543 aa17.93■□□□□ 0.46
CPSF7-201ENST00000340437 NSD2O96028 1365 aa17.93■□□□□ 0.46
CPSF7-201ENST00000340437 GRPEL1Q9HAV7 217 aa17.92■□□□□ 0.46
CPSF7-201ENST00000340437 ABCC11Q96J66 1382 aa17.92■□□□□ 0.46
CPSF7-201ENST00000340437 SMARCA5O60264 1052 aaPredicted RBP17.92■□□□□ 0.46
CPSF7-201ENST00000340437 SSFA2P28290 1259 aa17.92■□□□□ 0.46
CPSF7-201ENST00000340437 NFE2L2Q16236 605 aa17.92■□□□□ 0.46
CPSF7-201ENST00000340437 GBP4Q96PP9 640 aa17.92■□□□□ 0.46
CPSF7-201ENST00000340437 TXNDC2Q86VQ3 553 aa17.91■□□□□ 0.46
CPSF7-201ENST00000340437 ADGRB3O60242 1522 aa17.91■□□□□ 0.46
CPSF7-201ENST00000340437 MRPL50Q8N5N7 158 aaKnown RBP17.91■□□□□ 0.46
CPSF7-201ENST00000340437 ADGRB1O14514 1584 aa17.91■□□□□ 0.46
CPSF7-201ENST00000340437 NRXN1Q9ULB1 1477 aa17.91■□□□□ 0.46
CPSF7-201ENST00000340437 OSCARQ8IYS5 282 aa17.9■□□□□ 0.46
CPSF7-201ENST00000340437 MIS18AQ9NYP9 233 aa17.9■□□□□ 0.46
CPSF7-201ENST00000340437 GNAI1P63096 354 aa17.9■□□□□ 0.46
CPSF7-201ENST00000340437 SLC4A10Q6U841 1118 aa17.9■□□□□ 0.46
CPSF7-201ENST00000340437 KIDINS220Q9ULH0 1771 aa17.89■□□□□ 0.45
CPSF7-201ENST00000340437 MRE11P49959 708 aa17.89■□□□□ 0.45
CPSF7-201ENST00000340437 ALDH1L2Q3SY69 923 aa17.89■□□□□ 0.45
CPSF7-201ENST00000340437 SIRT2Q8IXJ6 389 aa17.89■□□□□ 0.45
CPSF7-201ENST00000340437 GAS2L2Q8NHY3 880 aa17.89■□□□□ 0.45
CPSF7-201ENST00000340437 OTUD7AQ8TE49 926 aaPredicted RBP17.88■□□□□ 0.45
CPSF7-201ENST00000340437 SLC52A1Q9NWF4 448 aa17.88■□□□□ 0.45
CPSF7-201ENST00000340437 NOL8Q76FK4 1167 aaKnown RBP17.88■□□□□ 0.45
CPSF7-201ENST00000340437 GAS2L3Q86XJ1 694 aa17.88■□□□□ 0.45
CPSF7-201ENST00000340437 IL16Q14005 1332 aa17.88■□□□□ 0.45
CPSF7-201ENST00000340437 BMP2KLQ5H9B9 411 aa17.88■□□□□ 0.45
CPSF7-201ENST00000340437 DDX49Q9Y6V7 483 aaKnown RBP17.87■□□□□ 0.45
CPSF7-201ENST00000340437 GLI2P10070 1586 aa17.87■□□□□ 0.45
CPSF7-201ENST00000340437 GCC1Q96CN9 775 aa17.87■□□□□ 0.45
CPSF7-201ENST00000340437 MCM10Q7L590 875 aa17.87■□□□□ 0.45
CPSF7-201ENST00000340437 K7ELQ4 463 aaPredicted RBP17.86■□□□□ 0.45
CPSF7-201ENST00000340437 ABCA9Q8IUA7 1624 aa17.86■□□□□ 0.45
CPSF7-201ENST00000340437 RBM25P49756 843 aaKnown RBP17.86■□□□□ 0.45
CPSF7-201ENST00000340437 AEBP1Q8IUX7 1158 aa17.86■□□□□ 0.45
CPSF7-201ENST00000340437 PPIP5K1Q6PFW1 1433 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms