RNA–Protein interactions for RNA: ENST00000340258.9

RASSF4-201, Transcript of Ras association domain family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RASSF4, Length 3,641 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASSF4-201ENST00000340258 ATP7AQ04656 1500 aa12.36□□□□□ -0.43
RASSF4-201ENST00000340258 FBLN1P23142 703 aa12.35□□□□□ -0.43
RASSF4-201ENST00000340258 SYNMO15061 1565 aa12.35□□□□□ -0.43
RASSF4-201ENST00000340258 HDAC1Q13547 482 aaPredicted RBP12.35□□□□□ -0.43
RASSF4-201ENST00000340258 SKOR2Q2VWA4 1001 aaPredicted RBP12.35□□□□□ -0.43
RASSF4-201ENST00000340258 STAC3Q96MF2 364 aa12.35□□□□□ -0.43
RASSF4-201ENST00000340258 CALD1Q05682 793 aaKnown RBP12.34□□□□□ -0.43
RASSF4-201ENST00000340258 ERVK-7P63135 1459 aa12.34□□□□□ -0.43
RASSF4-201ENST00000340258 K7ELQ4 463 aaPredicted RBP12.34□□□□□ -0.43
RASSF4-201ENST00000340258 FOXD4L6Q3SYB3 417 aaPredicted RBP12.34□□□□□ -0.43
RASSF4-201ENST00000340258 FOXD4L3Q6VB84 417 aaPredicted RBP12.34□□□□□ -0.43
RASSF4-201ENST00000340258 GAS2L2Q8NHY3 880 aa12.34□□□□□ -0.43
RASSF4-201ENST00000340258 R3HCC1Q9Y3T6 440 aaKnown RBP12.34□□□□□ -0.43
RASSF4-201ENST00000340258 SMC5Q8IY18 1101 aa12.34□□□□□ -0.43
RASSF4-201ENST00000340258 ZNF518AQ6AHZ1 1483 aa12.33□□□□□ -0.44
RASSF4-201ENST00000340258 HMOX1P09601 288 aa12.33□□□□□ -0.44
RASSF4-201ENST00000340258 TBC1D9Q6ZT07 1266 aa12.33□□□□□ -0.44
RASSF4-201ENST00000340258 ZNF692Q9BU19 519 aaPredicted RBP12.33□□□□□ -0.44
RASSF4-201ENST00000340258 ZBTB40Q9NUA8 1239 aa12.33□□□□□ -0.44
RASSF4-201ENST00000340258 NUCB1Q02818 461 aa12.32□□□□□ -0.44
RASSF4-201ENST00000340258 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.32□□□□□ -0.44
RASSF4-201ENST00000340258 RAB3GAP1Q15042 981 aa12.32□□□□□ -0.44
RASSF4-201ENST00000340258 NOL8Q76FK4 1167 aaKnown RBP12.32□□□□□ -0.44
RASSF4-201ENST00000340258 UNC13BO14795 1591 aa12.31□□□□□ -0.44
RASSF4-201ENST00000340258 MPNDQ8N594 471 aa12.31□□□□□ -0.44
RASSF4-201ENST00000340258 MINK1Q8N4C8 1332 aaPredicted RBP12.31□□□□□ -0.44
RASSF4-201ENST00000340258 KIF16BQ96L93 1317 aa12.31□□□□□ -0.44
RASSF4-201ENST00000340258 ATP10AO60312 1499 aa12.31□□□□□ -0.44
RASSF4-201ENST00000340258 CCDC27Q2M243 656 aa12.31□□□□□ -0.44
RASSF4-201ENST00000340258 TRIM35Q9UPQ4 493 aa12.31□□□□□ -0.44
RASSF4-201ENST00000340258 EVC2Q86UK5 1308 aa12.31□□□□□ -0.44
RASSF4-201ENST00000340258 UGGT1Q9NYU2 1555 aa12.31□□□□□ -0.44
RASSF4-201ENST00000340258 POGZQ7Z3K3 1410 aa12.3□□□□□ -0.44
RASSF4-201ENST00000340258 RBM25P49756 843 aaKnown RBP12.3□□□□□ -0.44
RASSF4-201ENST00000340258 RNF214Q8ND24 703 aa12.3□□□□□ -0.44
RASSF4-201ENST00000340258 LAMC1P11047 1609 aa12.3□□□□□ -0.44
RASSF4-201ENST00000340258 PRPF40AO75400 957 aaKnown RBP12.3□□□□□ -0.44
RASSF4-201ENST00000340258 CCDC173Q0VFZ6 552 aa12.3□□□□□ -0.44
RASSF4-201ENST00000340258 CHAMP1Q96JM3 812 aa12.3□□□□□ -0.44
RASSF4-201ENST00000340258 NOS1P29475 1434 aa12.3□□□□□ -0.44
RASSF4-201ENST00000340258 INO80Q9ULG1 1556 aaPredicted RBP12.3□□□□□ -0.44
RASSF4-201ENST00000340258 DIAPH1O60610 1272 aaKnown RBP12.3□□□□□ -0.44
RASSF4-201ENST00000340258 BAG4O95429 457 aaKnown RBP12.3□□□□□ -0.44
RASSF4-201ENST00000340258 XPCQ01831 940 aaPredicted RBP12.3□□□□□ -0.44
RASSF4-201ENST00000340258 CIZ1Q9ULV3 898 aaPredicted RBP12.3□□□□□ -0.44
RASSF4-201ENST00000340258 PTMAP06454 111 aaKnown RBP12.29□□□□□ -0.44
RASSF4-201ENST00000340258 SNX21Q969T3 373 aa12.29□□□□□ -0.44
RASSF4-201ENST00000340258 PHF23Q9BUL5 403 aaPredicted RBP12.29□□□□□ -0.44
RASSF4-201ENST00000340258 MADDQ8WXG6 1647 aa12.29□□□□□ -0.44
RASSF4-201ENST00000340258 KDM5AP29375 1690 aaKnown RBP12.29□□□□□ -0.44
RASSF4-201ENST00000340258 ZSCAN30Q86W11 494 aa12.29□□□□□ -0.44
RASSF4-201ENST00000340258 RBM27Q9P2N5 1060 aaKnown RBP12.29□□□□□ -0.44
RASSF4-201ENST00000340258 ISY1Q9ULR0 285 aaKnown RBP12.29□□□□□ -0.44
RASSF4-201ENST00000340258 PTPRTO14522 1441 aa12.29□□□□□ -0.44
RASSF4-201ENST00000340258 IQGAP3Q86VI3 1631 aa12.29□□□□□ -0.44
RASSF4-201ENST00000340258 PRKAR2BP31323 418 aa12.29□□□□□ -0.44
RASSF4-201ENST00000340258 BMP2KLQ5H9B9 411 aa12.28□□□□□ -0.44
RASSF4-201ENST00000340258 DNTTIP2Q5QJE6 756 aaKnown RBP12.28□□□□□ -0.44
RASSF4-201ENST00000340258 CFAP74Q9C0B2 1584 aa12.28□□□□□ -0.44
RASSF4-201ENST00000340258 NEO1Q92859 1461 aa12.28□□□□□ -0.44
RASSF4-201ENST00000340258 PKP1Q13835 747 aa12.28□□□□□ -0.44
RASSF4-201ENST00000340258 TPM2P07951 284 aa12.27□□□□□ -0.44
RASSF4-201ENST00000340258 C16orf71Q8IYS4 520 aaPredicted RBP12.27□□□□□ -0.44
RASSF4-201ENST00000340258 KIDINS220Q9ULH0 1771 aa12.27□□□□□ -0.45
RASSF4-201ENST00000340258 CT47B1P0C2W7 299 aaPredicted RBP12.27□□□□□ -0.45
RASSF4-201ENST00000340258 PTMSP20962 102 aa12.27□□□□□ -0.45
RASSF4-201ENST00000340258 TSPYL6Q8N831 410 aa12.27□□□□□ -0.45
RASSF4-201ENST00000340258 CDC45O75419 566 aa12.26□□□□□ -0.45
RASSF4-201ENST00000340258 ATAD2Q6PL18 1390 aa12.26□□□□□ -0.45
RASSF4-201ENST00000340258 MLECQ14165 292 aa12.26□□□□□ -0.45
RASSF4-201ENST00000340258 KIF2CQ99661 725 aa12.26□□□□□ -0.45
RASSF4-201ENST00000340258 TSPOAP1O95153 1857 aa12.25□□□□□ -0.45
RASSF4-201ENST00000340258 GCC1Q96CN9 775 aa12.25□□□□□ -0.45
RASSF4-201ENST00000340258 SMARCA5O60264 1052 aaPredicted RBP12.24□□□□□ -0.45
RASSF4-201ENST00000340258 PLCB2Q00722 1185 aa12.24□□□□□ -0.45
RASSF4-201ENST00000340258 KLHL40Q2TBA0 621 aa12.24□□□□□ -0.45
RASSF4-201ENST00000340258 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.24□□□□□ -0.45
RASSF4-201ENST00000340258 ZGPATQ8N5A5 531 aaKnown RBP12.24□□□□□ -0.45
RASSF4-201ENST00000340258 MLH3Q9UHC1 1453 aa12.24□□□□□ -0.45
RASSF4-201ENST00000340258 PRIM1P49642 420 aaKnown RBP12.24□□□□□ -0.45
RASSF4-201ENST00000340258 ZSCAN23Q3MJ62 389 aa12.24□□□□□ -0.45
RASSF4-201ENST00000340258 CFAP65Q6ZU64 1925 aaKnown RBP12.24□□□□□ -0.45
RASSF4-201ENST00000340258 RNF17Q9BXT8 1623 aaKnown RBP12.24□□□□□ -0.45
RASSF4-201ENST00000340258 IQGAP1P46940 1657 aa12.24□□□□□ -0.45
RASSF4-201ENST00000340258 SYCE3A1L190 88 aa12.24□□□□□ -0.45
RASSF4-201ENST00000340258 C14orf93Q9H972 538 aaKnown RBP12.24□□□□□ -0.45
RASSF4-201ENST00000340258 VIRMAQ69YN4 1812 aaKnown RBP12.23□□□□□ -0.45
RASSF4-201ENST00000340258 CLTCL1P53675 1640 aa12.23□□□□□ -0.45
RASSF4-201ENST00000340258 RBSNQ9H1K0 784 aa12.23□□□□□ -0.45
RASSF4-201ENST00000340258 ZMYM3Q14202 1370 aa12.23□□□□□ -0.45
RASSF4-201ENST00000340258 ZBTB7BO15156 539 aaPredicted RBP12.23□□□□□ -0.45
RASSF4-201ENST00000340258 DCTN1Q14203 1278 aa12.23□□□□□ -0.45
RASSF4-201ENST00000340258 PDCL3Q9H2J4 239 aa12.23□□□□□ -0.45
RASSF4-201ENST00000340258 TERF2IPQ9NYB0 399 aa12.23□□□□□ -0.45
RASSF4-201ENST00000340258 HECW2Q9P2P5 1572 aa12.23□□□□□ -0.45
RASSF4-201ENST00000340258 DDIT3P35638 169 aa12.23□□□□□ -0.45
RASSF4-201ENST00000340258 CASC1Q6TDU7 716 aa12.23□□□□□ -0.45
RASSF4-201ENST00000340258 PLEKHF1Q96S99 279 aa12.23□□□□□ -0.45
RASSF4-201ENST00000340258 MAP3K4Q9Y6R4 1608 aa12.23□□□□□ -0.45
RASSF4-201ENST00000340258 DIP2BQ9P265 1576 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms