RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 POLR3AO14802 1390 aaPredicted RBP13.14□□□□□ -0.31
RBFOX1-202ENST00000340209 NPC1L1Q9UHC9 1359 aa13.14□□□□□ -0.31
RBFOX1-202ENST00000340209 TMEM2Q9UHN6 1383 aa13.14□□□□□ -0.31
RBFOX1-202ENST00000340209 POLKQ9UBT6 870 aa13.13□□□□□ -0.31
RBFOX1-202ENST00000340209 ROBO2Q9HCK4 1378 aa13.13□□□□□ -0.31
RBFOX1-202ENST00000340209 RNF123Q5XPI4 1314 aa13.13□□□□□ -0.31
RBFOX1-202ENST00000340209 THEMISQ8N1K5 641 aaPredicted RBP13.13□□□□□ -0.31
RBFOX1-202ENST00000340209 TMPOP42166 694 aaKnown RBP13.13□□□□□ -0.31
RBFOX1-202ENST00000340209 ACEP12821 1306 aa13.13□□□□□ -0.31
RBFOX1-202ENST00000340209 KIF13AQ9H1H9 1805 aa13.12□□□□□ -0.31
RBFOX1-202ENST00000340209 ANP32AP39687 249 aaKnown RBP13.12□□□□□ -0.31
RBFOX1-202ENST00000340209 MYH16Q9H6N6 1097 aa13.12□□□□□ -0.31
RBFOX1-202ENST00000340209 ARHGEF28Q8N1W1 1705 aaKnown RBP13.12□□□□□ -0.31
RBFOX1-202ENST00000340209 ARHGEF40Q8TER5 1519 aa13.12□□□□□ -0.31
RBFOX1-202ENST00000340209 PRR36Q9H6K5 1346 aa13.12□□□□□ -0.31
RBFOX1-202ENST00000340209 ZC3H13Q5T200 1668 aaKnown RBP13.12□□□□□ -0.31
RBFOX1-202ENST00000340209 ABCC11Q96J66 1382 aa13.12□□□□□ -0.31
RBFOX1-202ENST00000340209 FAM83GA6ND36 823 aa13.12□□□□□ -0.31
RBFOX1-202ENST00000340209 KCNA6P17658 529 aa13.12□□□□□ -0.31
RBFOX1-202ENST00000340209 PHACTR3Q96KR7 559 aa13.11□□□□□ -0.31
RBFOX1-202ENST00000340209 AEBP1Q8IUX7 1158 aa13.11□□□□□ -0.31
RBFOX1-202ENST00000340209 ITPRIPQ8IWB1 547 aa13.1□□□□□ -0.31
RBFOX1-202ENST00000340209 NBR1Q14596 966 aa13.1□□□□□ -0.31
RBFOX1-202ENST00000340209 ZNF521Q96K83 1311 aa13.1□□□□□ -0.31
RBFOX1-202ENST00000340209 AMPHP49418 695 aa13.1□□□□□ -0.31
RBFOX1-202ENST00000340209 NLRP6P59044 892 aa13.1□□□□□ -0.31
RBFOX1-202ENST00000340209 SULT6B1Q6IMI4 303 aa13.1□□□□□ -0.31
RBFOX1-202ENST00000340209 NKTRP30414 1462 aaKnown RBP13.1□□□□□ -0.31
RBFOX1-202ENST00000340209 ZFYVE9O95405 1425 aa13.09□□□□□ -0.31
RBFOX1-202ENST00000340209 HSP90AB2PQ58FF8 381 aa13.08□□□□□ -0.31
RBFOX1-202ENST00000340209 MSH5O43196 834 aa13.08□□□□□ -0.32
RBFOX1-202ENST00000340209 FANCIQ9NVI1 1328 aa13.08□□□□□ -0.32
RBFOX1-202ENST00000340209 RLBP1P12271 317 aa13.07□□□□□ -0.32
RBFOX1-202ENST00000340209 RARSP54136 660 aaKnown RBP13.07□□□□□ -0.32
RBFOX1-202ENST00000340209 NEURL4Q96JN8 1562 aa13.07□□□□□ -0.32
RBFOX1-202ENST00000340209 AGLP35573 1532 aa13.07□□□□□ -0.32
RBFOX1-202ENST00000340209 MIS18AQ9NYP9 233 aa13.06□□□□□ -0.32
RBFOX1-202ENST00000340209 NSD2O96028 1365 aa13.06□□□□□ -0.32
RBFOX1-202ENST00000340209 ESCO1Q5FWF5 840 aa13.06□□□□□ -0.32
RBFOX1-202ENST00000340209 PDE4AP27815 886 aa13.06□□□□□ -0.32
RBFOX1-202ENST00000340209 ABTB2Q8N961 1025 aa13.06□□□□□ -0.32
RBFOX1-202ENST00000340209 NECTIN2Q92692 538 aa13.05□□□□□ -0.32
RBFOX1-202ENST00000340209 USHBP1Q8N6Y0 703 aa13.05□□□□□ -0.32
RBFOX1-202ENST00000340209 TTC21BQ7Z4L5 1316 aa13.05□□□□□ -0.32
RBFOX1-202ENST00000340209 MCM10Q7L590 875 aa13.05□□□□□ -0.32
RBFOX1-202ENST00000340209 SPATA31D1Q6ZQQ2 1576 aa13.04□□□□□ -0.32
RBFOX1-202ENST00000340209 TRIM35Q9UPQ4 493 aa13.04□□□□□ -0.32
RBFOX1-202ENST00000340209 MYO3AQ8NEV4 1616 aa13.04□□□□□ -0.32
RBFOX1-202ENST00000340209 SSH1Q8WYL5 1049 aa13.04□□□□□ -0.32
RBFOX1-202ENST00000340209 NINLQ9Y2I6 1382 aa13.04□□□□□ -0.32
RBFOX1-202ENST00000340209 ANKLE2Q86XL3 938 aa13.04□□□□□ -0.32
RBFOX1-202ENST00000340209 PUS7Q96PZ0 661 aaKnown RBP13.04□□□□□ -0.32
RBFOX1-202ENST00000340209 WDR63Q8IWG1 891 aa13.03□□□□□ -0.32
RBFOX1-202ENST00000340209 IGHDP01880 384 aa13.03□□□□□ -0.32
RBFOX1-202ENST00000340209 C1orf115Q9H7X2 142 aa13.03□□□□□ -0.32
RBFOX1-202ENST00000340209 NOB1Q9ULX3 412 aaKnown RBP13.03□□□□□ -0.32
RBFOX1-202ENST00000340209 KRT24Q2M2I5 525 aa13.03□□□□□ -0.32
RBFOX1-202ENST00000340209 PNNQ9H307 717 aaKnown RBP13.03□□□□□ -0.32
RBFOX1-202ENST00000340209 CD163L1Q9NR16 1453 aa13.03□□□□□ -0.32
RBFOX1-202ENST00000340209 SLC4A3P48751 1232 aa13.02□□□□□ -0.32
RBFOX1-202ENST00000340209 ZKSCAN2Q63HK3 967 aa13.02□□□□□ -0.33
RBFOX1-202ENST00000340209 ZNF692Q9BU19 519 aaPredicted RBP13.02□□□□□ -0.33
RBFOX1-202ENST00000340209 FOXO3O43524 673 aa13.01□□□□□ -0.33
RBFOX1-202ENST00000340209 PSME1Q06323 249 aa13.01□□□□□ -0.33
RBFOX1-202ENST00000340209 RSPH6AQ9H0K4 717 aa13.01□□□□□ -0.33
RBFOX1-202ENST00000340209 DAXXQ9UER7 740 aaPredicted RBP13.01□□□□□ -0.33
RBFOX1-202ENST00000340209 APBB1O00213 710 aa13.01□□□□□ -0.33
RBFOX1-202ENST00000340209 FCHSD2O94868 740 aa13.01□□□□□ -0.33
RBFOX1-202ENST00000340209 EIF4A2Q14240 407 aaKnown RBP13.01□□□□□ -0.33
RBFOX1-202ENST00000340209 CENPQQ7L2Z9 268 aaPredicted RBP13.01□□□□□ -0.33
RBFOX1-202ENST00000340209 DZIP1LQ8IYY4 767 aaKnown RBP13.01□□□□□ -0.33
RBFOX1-202ENST00000340209 TSPYL6Q8N831 410 aa13.01□□□□□ -0.33
RBFOX1-202ENST00000340209 PLEKHF1Q96S99 279 aa13.01□□□□□ -0.33
RBFOX1-202ENST00000340209 ZBTB47Q9UFB7 747 aaPredicted RBP13□□□□□ -0.33
RBFOX1-202ENST00000340209 HSPA2P54652 639 aa13□□□□□ -0.33
RBFOX1-202ENST00000340209 NFE2L2Q16236 605 aa13□□□□□ -0.33
RBFOX1-202ENST00000340209 ADAMTS13Q76LX8 1427 aa13□□□□□ -0.33
RBFOX1-202ENST00000340209 TRMT2AQ8IZ69 625 aaKnown RBP12.99□□□□□ -0.33
RBFOX1-202ENST00000340209 ANP32EQ9BTT0 268 aa12.99□□□□□ -0.33
RBFOX1-202ENST00000340209 PTPRUQ92729 1446 aa12.99□□□□□ -0.33
RBFOX1-202ENST00000340209 CPS1P31327 1500 aa12.99□□□□□ -0.33
RBFOX1-202ENST00000340209 IL13P35225 146 aa12.98□□□□□ -0.33
RBFOX1-202ENST00000340209 EDC4Q6P2E9 1401 aaKnown RBP12.98□□□□□ -0.33
RBFOX1-202ENST00000340209 INSRP06213 1382 aa12.98□□□□□ -0.33
RBFOX1-202ENST00000340209 RTF1Q92541 710 aaKnown RBP12.98□□□□□ -0.33
RBFOX1-202ENST00000340209 PLEKHG1Q9ULL1 1385 aa12.98□□□□□ -0.33
RBFOX1-202ENST00000340209 ZNF428Q96B54 188 aa12.98□□□□□ -0.33
RBFOX1-202ENST00000340209 TRIM27P14373 513 aa12.98□□□□□ -0.33
RBFOX1-202ENST00000340209 PROSER2Q86WR7 435 aaPredicted RBP12.98□□□□□ -0.33
RBFOX1-202ENST00000340209 NGEFQ8N5V2 710 aa12.98□□□□□ -0.33
RBFOX1-202ENST00000340209 PCDHB15Q9Y5E8 787 aa12.98□□□□□ -0.33
RBFOX1-202ENST00000340209 MAP3K19Q56UN5 1328 aa12.97□□□□□ -0.33
RBFOX1-202ENST00000340209 TBX22Q9Y458 520 aa12.97□□□□□ -0.33
RBFOX1-202ENST00000340209 TMEM57Q8N5G2 664 aa12.97□□□□□ -0.33
RBFOX1-202ENST00000340209 DDX17Q92841 729 aaKnown RBP12.97□□□□□ -0.33
RBFOX1-202ENST00000340209 NOP58Q9Y2X3 529 aaKnown RBP12.97□□□□□ -0.33
RBFOX1-202ENST00000340209 MBIPQ9NS73 344 aa12.96□□□□□ -0.33
RBFOX1-202ENST00000340209 ORAI2Q96SN7 254 aa12.96□□□□□ -0.33
RBFOX1-202ENST00000340209 SLC4A10Q6U841 1118 aa12.96□□□□□ -0.34
RBFOX1-202ENST00000340209 NLRP1Q9C000 1473 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms