RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 CABP2Q9NPB3 220 aa15.21■□□□□ 0.03
CCDC144CP-201ENST00000340196 IDI1Q13907 227 aa15.21■□□□□ 0.03
CCDC144CP-201ENST00000340196 FTSJ3Q8IY81 847 aaKnown RBP15.21■□□□□ 0.03
CCDC144CP-201ENST00000340196 SETBP1Q9Y6X0 1596 aa15.21■□□□□ 0.02
CCDC144CP-201ENST00000340196 UPF2Q9HAU5 1272 aaKnown RBP15.21■□□□□ 0.02
CCDC144CP-201ENST00000340196 TMEM131LA2VDJ0 1609 aa15.2■□□□□ 0.02
CCDC144CP-201ENST00000340196 EXOSC9Q06265 439 aaKnown RBP15.2■□□□□ 0.02
CCDC144CP-201ENST00000340196 SPATA31D1Q6ZQQ2 1576 aa15.2■□□□□ 0.02
CCDC144CP-201ENST00000340196 IQSEC2Q5JU85 1478 aa15.2■□□□□ 0.02
CCDC144CP-201ENST00000340196 NEXMIFQ5QGS0 1516 aa15.2■□□□□ 0.02
CCDC144CP-201ENST00000340196 ZFYVE9O95405 1425 aa15.19■□□□□ 0.02
CCDC144CP-201ENST00000340196 MVPQ14764 893 aaKnown RBP15.19■□□□□ 0.02
CCDC144CP-201ENST00000340196 ITPRIPQ8IWB1 547 aa15.19■□□□□ 0.02
CCDC144CP-201ENST00000340196 SMC4Q9NTJ3 1288 aa15.19■□□□□ 0.02
CCDC144CP-201ENST00000340196 TRIM27P14373 513 aa15.18■□□□□ 0.02
CCDC144CP-201ENST00000340196 FBLN1P23142 703 aa15.18■□□□□ 0.02
CCDC144CP-201ENST00000340196 GGNBP2Q9H3C7 697 aa15.18■□□□□ 0.02
CCDC144CP-201ENST00000340196 RWDD1Q9H446 243 aaPredicted RBP15.18■□□□□ 0.02
CCDC144CP-201ENST00000340196 MYO5BQ9ULV0 1848 aa15.17■□□□□ 0.02
CCDC144CP-201ENST00000340196 XRCC6P12956 609 aaKnown RBP eCLIP15.17■□□□□ 0.02
CCDC144CP-201ENST00000340196 DZIP1LQ8IYY4 767 aaKnown RBP15.17■□□□□ 0.02
CCDC144CP-201ENST00000340196 SSH1Q8WYL5 1049 aa15.17■□□□□ 0.02
CCDC144CP-201ENST00000340196 FAM43AQ8N2R8 423 aa15.16■□□□□ 0.02
CCDC144CP-201ENST00000340196 C22orf23Q9BZE7 217 aa15.16■□□□□ 0.02
CCDC144CP-201ENST00000340196 STK26Q9P289 416 aa15.16■□□□□ 0.02
CCDC144CP-201ENST00000340196 FBXO31Q5XUX0 539 aaPredicted RBP15.16■□□□□ 0.02
CCDC144CP-201ENST00000340196 C14orf93Q9H972 538 aaKnown RBP15.16■□□□□ 0.02
CCDC144CP-201ENST00000340196 ZKSCAN2Q63HK3 967 aa15.16■□□□□ 0.02
CCDC144CP-201ENST00000340196 DNAJC5Q9H3Z4 198 aa15.16■□□□□ 0.02
CCDC144CP-201ENST00000340196 FOXD4L1Q9NU39 408 aa15.16■□□□□ 0.02
CCDC144CP-201ENST00000340196 NINLQ9Y2I6 1382 aa15.15■□□□□ 0.02
CCDC144CP-201ENST00000340196 VGFO15240 615 aaPredicted RBP15.15■□□□□ 0.02
CCDC144CP-201ENST00000340196 GLIPR1L2Q4G1C9 344 aa15.15■□□□□ 0.02
CCDC144CP-201ENST00000340196 WDR63Q8IWG1 891 aa15.15■□□□□ 0.02
CCDC144CP-201ENST00000340196 NOB1Q9ULX3 412 aaKnown RBP15.14■□□□□ 0.01
CCDC144CP-201ENST00000340196 ADGRB1O14514 1584 aa15.14■□□□□ 0.01
CCDC144CP-201ENST00000340196 MYO3AQ8NEV4 1616 aa15.14■□□□□ 0.01
CCDC144CP-201ENST00000340196 MCM4P33991 863 aa15.14■□□□□ 0.01
CCDC144CP-201ENST00000340196 TMEM57Q8N5G2 664 aa15.14■□□□□ 0.01
CCDC144CP-201ENST00000340196 CFAP53Q96M91 514 aa15.13■□□□□ 0.01
CCDC144CP-201ENST00000340196 LNPKQ9C0E8 428 aa15.13■□□□□ 0.01
CCDC144CP-201ENST00000340196 ZMYM3Q14202 1370 aa15.13■□□□□ 0.01
CCDC144CP-201ENST00000340196 MYH16Q9H6N6 1097 aa15.13■□□□□ 0.01
CCDC144CP-201ENST00000340196 C1orf115Q9H7X2 142 aa15.13■□□□□ 0.01
CCDC144CP-201ENST00000340196 TRIM35Q9UPQ4 493 aa15.12■□□□□ 0.01
CCDC144CP-201ENST00000340196 MLECQ14165 292 aa15.12■□□□□ 0.01
CCDC144CP-201ENST00000340196 NGEFQ8N5V2 710 aa15.12■□□□□ 0.01
CCDC144CP-201ENST00000340196 SBNO2Q9Y2G9 1366 aa15.11■□□□□ 0.01
CCDC144CP-201ENST00000340196 TRHP20396 242 aaPredicted RBP15.11■□□□□ 0.01
CCDC144CP-201ENST00000340196 THUMPD2Q9BTF0 503 aaKnown RBP15.1■□□□□ 0.01
CCDC144CP-201ENST00000340196 QRICH2Q9H0J4 1663 aa15.1■□□□□ 0.01
CCDC144CP-201ENST00000340196 GOLGA6L3A6NEY3 463 aa15.1■□□□□ 0.01
CCDC144CP-201ENST00000340196 TMPOP42166 694 aaKnown RBP15.1■□□□□ 0.01
CCDC144CP-201ENST00000340196 TRAK2O60296 914 aa15.09■□□□□ 0.01
CCDC144CP-201ENST00000340196 SRPK2P78362 688 aaKnown RBP15.09■□□□□ 0.01
CCDC144CP-201ENST00000340196 A2ML1A8K2U0 1454 aa15.09■□□□□ 0.01
CCDC144CP-201ENST00000340196 ELL2O00472 640 aaPredicted RBP15.08■□□□□ 0.01
CCDC144CP-201ENST00000340196 CD2BP2O95400 341 aaKnown RBP15.08■□□□□ 0.01
CCDC144CP-201ENST00000340196 ATF7IPQ6VMQ6 1270 aa15.08■□□□□ 0.01
CCDC144CP-201ENST00000340196 ESF1Q9H501 851 aaKnown RBP15.08■□□□□ 0.01
CCDC144CP-201ENST00000340196 PLEKHF1Q96S99 279 aa15.08■□□□□ 0
CCDC144CP-201ENST00000340196 MINK1Q8N4C8 1332 aaPredicted RBP15.07■□□□□ 0
CCDC144CP-201ENST00000340196 RIPK4P57078 832 aa15.07■□□□□ 0
CCDC144CP-201ENST00000340196 CCDC27Q2M243 656 aa15.07■□□□□ 0
CCDC144CP-201ENST00000340196 RBM42Q9BTD8 480 aaKnown RBP15.07■□□□□ 0
CCDC144CP-201ENST00000340196 A0A1W2PP64 1363 aa15.07■□□□□ 0
CCDC144CP-201ENST00000340196 TULP4Q9NRJ4 1543 aa15.06■□□□□ 0
CCDC144CP-201ENST00000340196 ZNF692Q9BU19 519 aaPredicted RBP15.06■□□□□ 0
CCDC144CP-201ENST00000340196 L1TD1Q5T7N2 865 aaKnown RBP15.06■□□□□ 0
CCDC144CP-201ENST00000340196 FSD2A1L4K1 749 aa15.05■□□□□ 0
CCDC144CP-201ENST00000340196 CHMP5Q9NZZ3 219 aa15.05■□□□□ 0
CCDC144CP-201ENST00000340196 HSCBQ8IWL3 235 aa15.05■□□□□ -0
CCDC144CP-201ENST00000340196 EVC2Q86UK5 1308 aa15.04■□□□□ -0
CCDC144CP-201ENST00000340196 ZBTB40Q9NUA8 1239 aa15.04■□□□□ -0
CCDC144CP-201ENST00000340196 DDX19BQ9UMR2 479 aa15.04■□□□□ -0
CCDC144CP-201ENST00000340196 ANKRD36BQ8N2N9 1353 aa15.03■□□□□ -0
CCDC144CP-201ENST00000340196 HMOX1P09601 288 aa15.03■□□□□ -0
CCDC144CP-201ENST00000340196 GAS2L3Q86XJ1 694 aa15.03■□□□□ -0
CCDC144CP-201ENST00000340196 SMC5Q8IY18 1101 aa15.03■□□□□ -0
CCDC144CP-201ENST00000340196 NAP1L5Q96NT1 182 aaPredicted RBP15.03■□□□□ -0
CCDC144CP-201ENST00000340196 ARHGEF28Q8N1W1 1705 aaKnown RBP15.03■□□□□ -0
CCDC144CP-201ENST00000340196 HDAC1Q13547 482 aaPredicted RBP15.02■□□□□ -0
CCDC144CP-201ENST00000340196 CNKSR2Q8WXI2 1034 aa15.02■□□□□ -0
CCDC144CP-201ENST00000340196 TNRQ92752 1358 aa15.02■□□□□ -0
CCDC144CP-201ENST00000340196 ERBB4Q15303 1308 aa15.02■□□□□ -0
CCDC144CP-201ENST00000340196 FYB1O15117 783 aa15.02■□□□□ -0
CCDC144CP-201ENST00000340196 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.02■□□□□ -0
CCDC144CP-201ENST00000340196 TSPYL6Q8N831 410 aa15.02■□□□□ -0
CCDC144CP-201ENST00000340196 ATAD2Q6PL18 1390 aa15.02■□□□□ -0
CCDC144CP-201ENST00000340196 TNPO1Q92973 898 aaKnown RBP15.02□□□□□ -0.01
CCDC144CP-201ENST00000340196 STAG3Q9UJ98 1225 aa15.02□□□□□ -0.01
CCDC144CP-201ENST00000340196 ANKRD45Q5TZF3 282 aa15.01□□□□□ -0.01
CCDC144CP-201ENST00000340196 ALKQ9UM73 1620 aa15.01□□□□□ -0.01
CCDC144CP-201ENST00000340196 RIMS2Q9UQ26 1411 aa15.01□□□□□ -0.01
CCDC144CP-201ENST00000340196 FER1L4A9Z1Z3 1794 aa15□□□□□ -0.01
CCDC144CP-201ENST00000340196 UBR1Q8IWV7 1749 aa15□□□□□ -0.01
CCDC144CP-201ENST00000340196 C3P01024 1663 aa15□□□□□ -0.01
CCDC144CP-201ENST00000340196 ADGRB2O60241 1585 aa14.99□□□□□ -0.01
CCDC144CP-201ENST00000340196 HSP90AB1P08238 724 aaKnown RBP14.99□□□□□ -0.01
CCDC144CP-201ENST00000340196 NUCB1Q02818 461 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms