RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 SSH2Q76I76 1423 aa28.34■■■□□ 2.13
VRK2-201ENST00000340157 ZRANB1Q9UGI0 708 aa28.34■■■□□ 2.13
VRK2-201ENST00000340157 MAP2P11137 1827 aaKnown RBP28.33■■■□□ 2.13
VRK2-201ENST00000340157 PMFBP1Q8TBY8 1022 aa28.32■■■□□ 2.12
VRK2-201ENST00000340157 COL3A1P02461 1466 aaPredicted RBP28.31■■■□□ 2.12
VRK2-201ENST00000340157 TTC21BQ7Z4L5 1316 aa28.3■■■□□ 2.12
VRK2-201ENST00000340157 FBLN1P23142 703 aa28.27■■■□□ 2.12
VRK2-201ENST00000340157 CFAP53Q96M91 514 aa28.25■■■□□ 2.11
VRK2-201ENST00000340157 OVOS2A0A0J9YW53 1432 aa28.25■■■□□ 2.11
VRK2-201ENST00000340157 OVOS2Q6IE36 1432 aa28.25■■■□□ 2.11
VRK2-201ENST00000340157 PROSER2Q86WR7 435 aaPredicted RBP28.24■■■□□ 2.11
VRK2-201ENST00000340157 SALL2Q9Y467 1007 aaPredicted RBP28.24■■■□□ 2.11
VRK2-201ENST00000340157 PNPLA6Q8IY17 1366 aa28.24■■■□□ 2.11
VRK2-201ENST00000340157 NGDNQ8NEJ9 315 aaKnown RBP28.23■■■□□ 2.11
VRK2-201ENST00000340157 PIK3C2AO00443 1686 aa28.23■■■□□ 2.11
VRK2-201ENST00000340157 CCDC146Q8IYE0 955 aa28.23■■■□□ 2.11
VRK2-201ENST00000340157 POLKQ9UBT6 870 aa28.23■■■□□ 2.11
VRK2-201ENST00000340157 SMG6Q86US8 1419 aaKnown RBP28.22■■■□□ 2.11
VRK2-201ENST00000340157 COG3Q96JB2 828 aa28.22■■■□□ 2.11
VRK2-201ENST00000340157 AATKQ6ZMQ8 1374 aa28.22■■■□□ 2.11
VRK2-201ENST00000340157 C14orf37Q86TY3 774 aa28.21■■■□□ 2.11
VRK2-201ENST00000340157 MARF1Q9Y4F3 1742 aaKnown RBP28.2■■■□□ 2.1
VRK2-201ENST00000340157 TTC21AQ8NDW8 1320 aa28.19■■■□□ 2.1
VRK2-201ENST00000340157 XIRP1Q702N8 1843 aaKnown RBP28.18■■■□□ 2.1
VRK2-201ENST00000340157 TMEM94Q12767 1356 aa28.17■■■□□ 2.1
VRK2-201ENST00000340157 PHF8Q9UPP1 1060 aa28.17■■■□□ 2.1
VRK2-201ENST00000340157 EMILIN1Q9Y6C2 1016 aa28.16■■■□□ 2.1
VRK2-201ENST00000340157 USP54Q70EL1 1684 aa28.16■■■□□ 2.1
VRK2-201ENST00000340157 NUDCQ9Y266 331 aa28.15■■■□□ 2.1
VRK2-201ENST00000340157 CDK12Q9NYV4 1490 aaPredicted RBP28.15■■■□□ 2.1
VRK2-201ENST00000340157 USP31Q70CQ4 1352 aa28.14■■■□□ 2.1
VRK2-201ENST00000340157 IQSEC2Q5JU85 1478 aa28.14■■■□□ 2.09
VRK2-201ENST00000340157 APAF1O14727 1248 aa28.13■■■□□ 2.09
VRK2-201ENST00000340157 C19orf44Q9H6X5 657 aa28.13■■■□□ 2.09
VRK2-201ENST00000340157 ZNF521Q96K83 1311 aa28.12■■■□□ 2.09
VRK2-201ENST00000340157 NCOA3Q9Y6Q9 1424 aa28.12■■■□□ 2.09
VRK2-201ENST00000340157 RRS1Q15050 365 aaKnown RBP28.11■■■□□ 2.09
VRK2-201ENST00000340157 ESCO1Q5FWF5 840 aa28.11■■■□□ 2.09
VRK2-201ENST00000340157 PEAK1Q9H792 1746 aa28.11■■■□□ 2.09
VRK2-201ENST00000340157 PDE3BQ13370 1112 aa28.1■■■□□ 2.09
VRK2-201ENST00000340157 SUPT16HQ9Y5B9 1047 aaKnown RBP28.1■■■□□ 2.09
VRK2-201ENST00000340157 PPM1GO15355 546 aaPredicted RBP28.1■■■□□ 2.09
VRK2-201ENST00000340157 U2AF1L5P0DN76 240 aaPredicted RBP28.1■■■□□ 2.09
VRK2-201ENST00000340157 U2AF1Q01081 240 aaKnown RBP eCLIP28.1■■■□□ 2.09
VRK2-201ENST00000340157 CDCA7LQ96GN5 454 aa28.1■■■□□ 2.09
VRK2-201ENST00000340157 ORAI2Q96SN7 254 aa28.1■■■□□ 2.09
VRK2-201ENST00000340157 C1orf167Q5SNV9 1468 aa28.1■■■□□ 2.09
VRK2-201ENST00000340157 DIAPH1O60610 1272 aaKnown RBP28.09■■■□□ 2.09
VRK2-201ENST00000340157 DCCP43146 1447 aa28.08■■■□□ 2.09
VRK2-201ENST00000340157 RUNDC1Q96C34 613 aa28.08■■■□□ 2.09
VRK2-201ENST00000340157 MST1RQ04912 1400 aa28.07■■■□□ 2.08
VRK2-201ENST00000340157 KIF1AQ12756 1690 aa28.06■■■□□ 2.08
VRK2-201ENST00000340157 U2SURPO15042 1029 aaKnown RBP28.06■■■□□ 2.08
VRK2-201ENST00000340157 LRRC7Q96NW7 1537 aa28.05■■■□□ 2.08
VRK2-201ENST00000340157 TRPM3Q9HCF6 1732 aaPredicted RBP28.04■■■□□ 2.08
VRK2-201ENST00000340157 ZNF335Q9H4Z2 1342 aaPredicted RBP28.03■■■□□ 2.08
VRK2-201ENST00000340157 PLEKHF1Q96S99 279 aa28.03■■■□□ 2.08
VRK2-201ENST00000340157 IL13P35225 146 aa28.02■■■□□ 2.08
VRK2-201ENST00000340157 TCP11L2Q8N4U5 519 aa28.01■■■□□ 2.07
VRK2-201ENST00000340157 NLRP6P59044 892 aa28■■■□□ 2.07
VRK2-201ENST00000340157 PAK3O75914 559 aaPredicted RBP28■■■□□ 2.07
VRK2-201ENST00000340157 NUTM2GQ5VZR2 741 aa28■■■□□ 2.07
VRK2-201ENST00000340157 SOX12O15370 315 aa27.99■■■□□ 2.07
VRK2-201ENST00000340157 FOXO3O43524 673 aa27.99■■■□□ 2.07
VRK2-201ENST00000340157 ATF3P18847 181 aa27.99■■■□□ 2.07
VRK2-201ENST00000340157 PSME1Q06323 249 aa27.99■■■□□ 2.07
VRK2-201ENST00000340157 ABTB2Q8N961 1025 aa27.99■■■□□ 2.07
VRK2-201ENST00000340157 NGEFQ8N5V2 710 aa27.98■■■□□ 2.07
VRK2-201ENST00000340157 FKBP8Q14318 412 aa27.98■■■□□ 2.07
VRK2-201ENST00000340157 RRP7AQ9Y3A4 280 aaKnown RBP27.98■■■□□ 2.07
VRK2-201ENST00000340157 MAP3K19Q56UN5 1328 aa27.97■■■□□ 2.07
VRK2-201ENST00000340157 PHF23Q9BUL5 403 aaPredicted RBP27.97■■■□□ 2.07
VRK2-201ENST00000340157 DMRT2Q9Y5R5 561 aa27.96■■■□□ 2.07
VRK2-201ENST00000340157 MSH6P52701 1360 aa27.96■■■□□ 2.07
VRK2-201ENST00000340157 RGPD1P0DJD0 1748 aa27.95■■■□□ 2.06
VRK2-201ENST00000340157 XPCQ01831 940 aaPredicted RBP27.95■■■□□ 2.06
VRK2-201ENST00000340157 GOLGA2Q08379 1002 aa27.95■■■□□ 2.06
VRK2-201ENST00000340157 WWC1Q8IX03 1113 aa27.94■■■□□ 2.06
VRK2-201ENST00000340157 RSPH6AQ9H0K4 717 aa27.94■■■□□ 2.06
VRK2-201ENST00000340157 SPINK5Q9NQ38 1064 aaPredicted RBP27.94■■■□□ 2.06
VRK2-201ENST00000340157 CADPS2Q86UW7 1296 aa27.93■■■□□ 2.06
VRK2-201ENST00000340157 NEFLP07196 543 aa27.93■■■□□ 2.06
VRK2-201ENST00000340157 NFAT5O94916 1531 aa27.93■■■□□ 2.06
VRK2-201ENST00000340157 LTN1O94822 1766 aa27.92■■■□□ 2.06
VRK2-201ENST00000340157 FCHSD2O94868 740 aa27.92■■■□□ 2.06
VRK2-201ENST00000340157 NEUROD2Q15784 382 aa27.92■■■□□ 2.06
VRK2-201ENST00000340157 HSP90AB2PQ58FF8 381 aa27.92■■■□□ 2.06
VRK2-201ENST00000340157 DUSP27Q5VZP5 1158 aa27.92■■■□□ 2.06
VRK2-201ENST00000340157 SBNO1A3KN83 1393 aa27.92■■■□□ 2.06
VRK2-201ENST00000340157 RNF123Q5XPI4 1314 aa27.91■■■□□ 2.06
VRK2-201ENST00000340157 SLFN5Q08AF3 891 aa27.91■■■□□ 2.06
VRK2-201ENST00000340157 EIF4A2Q14240 407 aaKnown RBP27.91■■■□□ 2.06
VRK2-201ENST00000340157 TRMT2AQ8IZ69 625 aaKnown RBP27.91■■■□□ 2.06
VRK2-201ENST00000340157 ALS2Q96Q42 1657 aa27.91■■■□□ 2.06
VRK2-201ENST00000340157 FLT4P35916 1363 aa27.9■■■□□ 2.06
VRK2-201ENST00000340157 CCDC27Q2M243 656 aa27.89■■■□□ 2.06
VRK2-201ENST00000340157 NCBP3Q53F19 620 aaKnown RBP27.89■■■□□ 2.06
VRK2-201ENST00000340157 HMOX1P09601 288 aa27.89■■■□□ 2.05
VRK2-201ENST00000340157 KRT28Q7Z3Y7 464 aa27.88■■■□□ 2.05
VRK2-201ENST00000340157 PRKAR2BP31323 418 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms