RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 FKBP5Q13451 457 aaPredicted RBP13.68□□□□□ -0.22
SEMA4D-201ENST00000339861 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.68□□□□□ -0.22
SEMA4D-201ENST00000339861 HAP1P54257 671 aaPredicted RBP13.67□□□□□ -0.22
SEMA4D-201ENST00000339861 MCM10Q7L590 875 aa13.67□□□□□ -0.22
SEMA4D-201ENST00000339861 RSPH6AQ9H0K4 717 aa13.67□□□□□ -0.22
SEMA4D-201ENST00000339861 CDC45O75419 566 aa13.67□□□□□ -0.22
SEMA4D-201ENST00000339861 ANO2Q9NQ90 1003 aa13.67□□□□□ -0.22
SEMA4D-201ENST00000339861 TSPYL4Q9UJ04 414 aa13.67□□□□□ -0.22
SEMA4D-201ENST00000339861 ZNF521Q96K83 1311 aa13.66□□□□□ -0.22
SEMA4D-201ENST00000339861 HDGFP51858 240 aaKnown RBP13.66□□□□□ -0.22
SEMA4D-201ENST00000339861 CAVIN1Q6NZI2 390 aaKnown RBP13.66□□□□□ -0.22
SEMA4D-201ENST00000339861 MPNDQ8N594 471 aa13.66□□□□□ -0.22
SEMA4D-201ENST00000339861 TSPYL6Q8N831 410 aa13.66□□□□□ -0.22
SEMA4D-201ENST00000339861 SAMD9LQ8IVG5 1584 aa13.66□□□□□ -0.22
SEMA4D-201ENST00000339861 SLC4A2P04920 1241 aa13.66□□□□□ -0.22
SEMA4D-201ENST00000339861 RNF214Q8ND24 703 aa13.66□□□□□ -0.22
SEMA4D-201ENST00000339861 WDR7Q9Y4E6 1490 aa13.65□□□□□ -0.22
SEMA4D-201ENST00000339861 POLR3AO14802 1390 aaPredicted RBP13.65□□□□□ -0.22
SEMA4D-201ENST00000339861 FCHSD2O94868 740 aa13.65□□□□□ -0.22
SEMA4D-201ENST00000339861 NAP1L2Q9ULW6 460 aaPredicted RBP13.65□□□□□ -0.22
SEMA4D-201ENST00000339861 MRE11P49959 708 aa13.64□□□□□ -0.23
SEMA4D-201ENST00000339861 NFE2L2Q16236 605 aa13.64□□□□□ -0.23
SEMA4D-201ENST00000339861 NCKAP5LQ9HCH0 1330 aa13.64□□□□□ -0.23
SEMA4D-201ENST00000339861 KDM5DQ9BY66 1539 aa13.64□□□□□ -0.23
SEMA4D-201ENST00000339861 PHACTR3Q96KR7 559 aa13.64□□□□□ -0.23
SEMA4D-201ENST00000339861 KRT24Q2M2I5 525 aa13.64□□□□□ -0.23
SEMA4D-201ENST00000339861 UGGT1Q9NYU2 1555 aa13.63□□□□□ -0.23
SEMA4D-201ENST00000339861 KIAA1211Q6ZU35 1233 aa13.63□□□□□ -0.23
SEMA4D-201ENST00000339861 FAM43AQ8N2R8 423 aa13.63□□□□□ -0.23
SEMA4D-201ENST00000339861 GRPEL1Q9HAV7 217 aa13.63□□□□□ -0.23
SEMA4D-201ENST00000339861 SLC52A1Q9NWF4 448 aa13.63□□□□□ -0.23
SEMA4D-201ENST00000339861 CCDC9Q9Y3X0 531 aaKnown RBP13.63□□□□□ -0.23
SEMA4D-201ENST00000339861 F6X3S4 739 aa13.63□□□□□ -0.23
SEMA4D-201ENST00000339861 PRPF40AO75400 957 aaKnown RBP13.63□□□□□ -0.23
SEMA4D-201ENST00000339861 TSHZ3Q63HK5 1081 aa13.63□□□□□ -0.23
SEMA4D-201ENST00000339861 INTS3Q68E01 1043 aaKnown RBP13.63□□□□□ -0.23
SEMA4D-201ENST00000339861 GCC1Q96CN9 775 aa13.63□□□□□ -0.23
SEMA4D-201ENST00000339861 CD109Q6YHK3 1445 aa13.63□□□□□ -0.23
SEMA4D-201ENST00000339861 SSFA2P28290 1259 aa13.62□□□□□ -0.23
SEMA4D-201ENST00000339861 NEK4P51957 841 aa13.62□□□□□ -0.23
SEMA4D-201ENST00000339861 TNPO1Q92973 898 aaKnown RBP13.62□□□□□ -0.23
SEMA4D-201ENST00000339861 RPGRIP1LQ68CZ1 1315 aa13.62□□□□□ -0.23
SEMA4D-201ENST00000339861 A0A0G2JS52 829 aa13.62□□□□□ -0.23
SEMA4D-201ENST00000339861 K7ELQ4 463 aaPredicted RBP13.62□□□□□ -0.23
SEMA4D-201ENST00000339861 CT47B1P0C2W7 299 aaPredicted RBP13.62□□□□□ -0.23
SEMA4D-201ENST00000339861 SLC26A8Q96RN1 970 aa13.62□□□□□ -0.23
SEMA4D-201ENST00000339861 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.62□□□□□ -0.23
SEMA4D-201ENST00000339861 C16orf71Q8IYS4 520 aaPredicted RBP13.62□□□□□ -0.23
SEMA4D-201ENST00000339861 TBC1D9Q6ZT07 1266 aa13.61□□□□□ -0.23
SEMA4D-201ENST00000339861 EXOC6BQ9Y2D4 811 aa13.61□□□□□ -0.23
SEMA4D-201ENST00000339861 ABCA8O94911 1581 aa13.61□□□□□ -0.23
SEMA4D-201ENST00000339861 EIF2AK4Q9P2K8 1649 aaKnown RBP13.61□□□□□ -0.23
SEMA4D-201ENST00000339861 MAP4K4O95819 1239 aaPredicted RBP13.61□□□□□ -0.23
SEMA4D-201ENST00000339861 TRMT2AQ8IZ69 625 aaKnown RBP13.61□□□□□ -0.23
SEMA4D-201ENST00000339861 MBIPQ9NS73 344 aa13.61□□□□□ -0.23
SEMA4D-201ENST00000339861 CHMP3Q9Y3E7 222 aa13.61□□□□□ -0.23
SEMA4D-201ENST00000339861 NASPP49321 788 aaPredicted RBP13.61□□□□□ -0.23
SEMA4D-201ENST00000339861 CDC42BPAQ5VT25 1732 aa13.61□□□□□ -0.23
SEMA4D-201ENST00000339861 REC8O95072 547 aa13.61□□□□□ -0.23
SEMA4D-201ENST00000339861 XRCC6P12956 609 aaKnown RBP eCLIP13.61□□□□□ -0.23
SEMA4D-201ENST00000339861 FGD1P98174 961 aa13.61□□□□□ -0.23
SEMA4D-201ENST00000339861 SKOR2Q2VWA4 1001 aaPredicted RBP13.61□□□□□ -0.23
SEMA4D-201ENST00000339861 RTEL1-TNFRSF6BF6WH68 1400 aa13.6□□□□□ -0.23
SEMA4D-201ENST00000339861 HSP90AA2PQ14568 343 aaPredicted RBP13.6□□□□□ -0.23
SEMA4D-201ENST00000339861 ATAD2Q6PL18 1390 aa13.6□□□□□ -0.23
SEMA4D-201ENST00000339861 C8orf58Q8NAV2 365 aa13.6□□□□□ -0.23
SEMA4D-201ENST00000339861 TRIM35Q9UPQ4 493 aa13.6□□□□□ -0.23
SEMA4D-201ENST00000339861 NUDT16Q96DE0 195 aaKnown RBP13.59□□□□□ -0.23
SEMA4D-201ENST00000339861 TTC37Q6PGP7 1564 aa13.59□□□□□ -0.23
SEMA4D-201ENST00000339861 MAST1Q9Y2H9 1570 aa13.59□□□□□ -0.23
SEMA4D-201ENST00000339861 A0A1W2PP64 1363 aa13.59□□□□□ -0.23
SEMA4D-201ENST00000339861 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.59□□□□□ -0.23
SEMA4D-201ENST00000339861 AEBP1Q8IUX7 1158 aa13.59□□□□□ -0.23
SEMA4D-201ENST00000339861 CFAP44Q96MT7 982 aa13.59□□□□□ -0.23
SEMA4D-201ENST00000339861 ATP10AO60312 1499 aa13.58□□□□□ -0.24
SEMA4D-201ENST00000339861 IL1RAPL2Q9NP60 686 aa13.58□□□□□ -0.24
SEMA4D-201ENST00000339861 NLRP6P59044 892 aa13.58□□□□□ -0.24
SEMA4D-201ENST00000339861 ANKRD36BQ8N2N9 1353 aa13.58□□□□□ -0.24
SEMA4D-201ENST00000339861 ZBTB40Q9NUA8 1239 aa13.57□□□□□ -0.24
SEMA4D-201ENST00000339861 POLKQ9UBT6 870 aa13.57□□□□□ -0.24
SEMA4D-201ENST00000339861 PTPRTO14522 1441 aa13.57□□□□□ -0.24
SEMA4D-201ENST00000339861 PTMSP20962 102 aa13.57□□□□□ -0.24
SEMA4D-201ENST00000339861 NUCB1Q02818 461 aa13.57□□□□□ -0.24
SEMA4D-201ENST00000339861 HDAC1Q13547 482 aaPredicted RBP13.57□□□□□ -0.24
SEMA4D-201ENST00000339861 GOLGA6L4A6NEF3 574 aa13.57□□□□□ -0.24
SEMA4D-201ENST00000339861 ARHGEF5Q12774 1597 aa13.56□□□□□ -0.24
SEMA4D-201ENST00000339861 CCDC27Q2M243 656 aa13.56□□□□□ -0.24
SEMA4D-201ENST00000339861 VSIG10Q8N0Z9 540 aa13.56□□□□□ -0.24
SEMA4D-201ENST00000339861 ASXL2Q76L83 1435 aa13.56□□□□□ -0.24
SEMA4D-201ENST00000339861 UPF3BQ9BZI7 483 aaKnown RBP13.56□□□□□ -0.24
SEMA4D-201ENST00000339861 NUCB2P80303 420 aa13.55□□□□□ -0.24
SEMA4D-201ENST00000339861 ALDH1L2Q3SY69 923 aa13.55□□□□□ -0.24
SEMA4D-201ENST00000339861 LARP6Q9BRS8 491 aaKnown RBP13.55□□□□□ -0.24
SEMA4D-201ENST00000339861 EID1Q9Y6B2 187 aa13.55□□□□□ -0.24
SEMA4D-201ENST00000339861 CCDC61Q9Y6R9 512 aa13.55□□□□□ -0.24
SEMA4D-201ENST00000339861 ERVK-7P63135 1459 aa13.55□□□□□ -0.24
SEMA4D-201ENST00000339861 ABCC2Q92887 1545 aa13.55□□□□□ -0.24
SEMA4D-201ENST00000339861 RABEP1Q15276 862 aa13.55□□□□□ -0.24
SEMA4D-201ENST00000339861 NPC1L1Q9UHC9 1359 aa13.55□□□□□ -0.24
SEMA4D-201ENST00000339861 ESPNB1AK53 854 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms