RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 POLR1AO95602 1720 aaPredicted RBP17.44■□□□□ 0.38
PCDH8-201ENST00000338862 INSRP06213 1382 aa17.44■□□□□ 0.38
PCDH8-201ENST00000338862 CDC45O75419 566 aa17.44■□□□□ 0.38
PCDH8-201ENST00000338862 XPCQ01831 940 aaPredicted RBP17.44■□□□□ 0.38
PCDH8-201ENST00000338862 CLCN1P35523 988 aa17.44■□□□□ 0.38
PCDH8-201ENST00000338862 KRT24Q2M2I5 525 aa17.44■□□□□ 0.38
PCDH8-201ENST00000338862 CFAP65Q6ZU64 1925 aaKnown RBP17.44■□□□□ 0.38
PCDH8-201ENST00000338862 EMILIN1Q9Y6C2 1016 aa17.44■□□□□ 0.38
PCDH8-201ENST00000338862 AAMPQ13685 434 aa17.43■□□□□ 0.38
PCDH8-201ENST00000338862 TAOK2Q9UL54 1235 aa17.43■□□□□ 0.38
PCDH8-201ENST00000338862 EIF4G3O43432 1585 aaKnown RBP17.43■□□□□ 0.38
PCDH8-201ENST00000338862 ZMYND15Q9H091 742 aa17.43■□□□□ 0.38
PCDH8-201ENST00000338862 POLR3AO14802 1390 aaPredicted RBP17.43■□□□□ 0.38
PCDH8-201ENST00000338862 WAPLQ7Z5K2 1190 aa17.43■□□□□ 0.38
PCDH8-201ENST00000338862 ZBTB40Q9NUA8 1239 aa17.43■□□□□ 0.38
PCDH8-201ENST00000338862 ST18O60284 1047 aa17.42■□□□□ 0.38
PCDH8-201ENST00000338862 PHACTR3Q96KR7 559 aa17.42■□□□□ 0.38
PCDH8-201ENST00000338862 STAC3Q96MF2 364 aa17.42■□□□□ 0.38
PCDH8-201ENST00000338862 TRIM35Q9UPQ4 493 aa17.42■□□□□ 0.38
PCDH8-201ENST00000338862 CHMP3Q9Y3E7 222 aa17.42■□□□□ 0.38
PCDH8-201ENST00000338862 NEK4P51957 841 aa17.42■□□□□ 0.38
PCDH8-201ENST00000338862 NUCB1Q02818 461 aa17.42■□□□□ 0.38
PCDH8-201ENST00000338862 OTUD7AQ8TE49 926 aaPredicted RBP17.42■□□□□ 0.38
PCDH8-201ENST00000338862 CHMP4BQ9H444 224 aaKnown RBP17.42■□□□□ 0.38
PCDH8-201ENST00000338862 LARP6Q9BRS8 491 aaKnown RBP17.41■□□□□ 0.38
PCDH8-201ENST00000338862 GDPD2Q9HCC8 539 aa17.41■□□□□ 0.38
PCDH8-201ENST00000338862 ANO2Q9NQ90 1003 aa17.41■□□□□ 0.38
PCDH8-201ENST00000338862 ZRANB1Q9UGI0 708 aa17.41■□□□□ 0.38
PCDH8-201ENST00000338862 HDAC1Q13547 482 aaPredicted RBP17.4■□□□□ 0.38
PCDH8-201ENST00000338862 CDK19Q9BWU1 502 aa17.4■□□□□ 0.38
PCDH8-201ENST00000338862 ERBB4Q15303 1308 aa17.4■□□□□ 0.38
PCDH8-201ENST00000338862 TRPM1Q7Z4N2 1603 aa17.4■□□□□ 0.38
PCDH8-201ENST00000338862 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.4■□□□□ 0.38
PCDH8-201ENST00000338862 SYCE3A1L190 88 aa17.4■□□□□ 0.38
PCDH8-201ENST00000338862 FYB1O15117 783 aa17.4■□□□□ 0.38
PCDH8-201ENST00000338862 PKP1Q13835 747 aa17.4■□□□□ 0.38
PCDH8-201ENST00000338862 UGGT1Q9NYU2 1555 aa17.4■□□□□ 0.38
PCDH8-201ENST00000338862 NUP160Q12769 1436 aa17.4■□□□□ 0.38
PCDH8-201ENST00000338862 BAG4O95429 457 aaKnown RBP17.39■□□□□ 0.38
PCDH8-201ENST00000338862 SMC5Q8IY18 1101 aa17.39■□□□□ 0.38
PCDH8-201ENST00000338862 ZGPATQ8N5A5 531 aaKnown RBP17.39■□□□□ 0.37
PCDH8-201ENST00000338862 SAMD9LQ8IVG5 1584 aa17.38■□□□□ 0.37
PCDH8-201ENST00000338862 LTV1Q96GA3 475 aaPredicted RBP17.38■□□□□ 0.37
PCDH8-201ENST00000338862 PRDM15P57071 1507 aaPredicted RBP17.38■□□□□ 0.37
PCDH8-201ENST00000338862 ESF1Q9H501 851 aaKnown RBP17.38■□□□□ 0.37
PCDH8-201ENST00000338862 CDC42BPAQ5VT25 1732 aa17.38■□□□□ 0.37
PCDH8-201ENST00000338862 MAP4K4O95819 1239 aaPredicted RBP17.37■□□□□ 0.37
PCDH8-201ENST00000338862 MCM10Q7L590 875 aa17.37■□□□□ 0.37
PCDH8-201ENST00000338862 C14orf93Q9H972 538 aaKnown RBP17.37■□□□□ 0.37
PCDH8-201ENST00000338862 GNAI1P63096 354 aa17.37■□□□□ 0.37
PCDH8-201ENST00000338862 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.37■□□□□ 0.37
PCDH8-201ENST00000338862 UPF3BQ9BZI7 483 aaKnown RBP17.37■□□□□ 0.37
PCDH8-201ENST00000338862 C8orf58Q8NAV2 365 aa17.36■□□□□ 0.37
PCDH8-201ENST00000338862 GCC1Q96CN9 775 aa17.36■□□□□ 0.37
PCDH8-201ENST00000338862 EXOC6BQ9Y2D4 811 aa17.36■□□□□ 0.37
PCDH8-201ENST00000338862 F6X3S4 739 aa17.36■□□□□ 0.37
PCDH8-201ENST00000338862 INTS3Q68E01 1043 aaKnown RBP17.36■□□□□ 0.37
PCDH8-201ENST00000338862 FSD2A1L4K1 749 aa17.35■□□□□ 0.37
PCDH8-201ENST00000338862 IDI1Q13907 227 aa17.35■□□□□ 0.37
PCDH8-201ENST00000338862 BMP2KLQ5H9B9 411 aa17.35■□□□□ 0.37
PCDH8-201ENST00000338862 NME9Q86XW9 330 aa17.35■□□□□ 0.37
PCDH8-201ENST00000338862 MBIPQ9NS73 344 aa17.35■□□□□ 0.37
PCDH8-201ENST00000338862 CCDC173Q0VFZ6 552 aa17.34■□□□□ 0.37
PCDH8-201ENST00000338862 CCDC27Q2M243 656 aa17.34■□□□□ 0.37
PCDH8-201ENST00000338862 API5Q9BZZ5 524 aaKnown RBP17.34■□□□□ 0.37
PCDH8-201ENST00000338862 RAB3GAP1Q15042 981 aa17.34■□□□□ 0.37
PCDH8-201ENST00000338862 NCKAP5LQ9HCH0 1330 aa17.34■□□□□ 0.37
PCDH8-201ENST00000338862 NUCB2P80303 420 aa17.34■□□□□ 0.37
PCDH8-201ENST00000338862 OS9Q13438 667 aaPredicted RBP17.34■□□□□ 0.37
PCDH8-201ENST00000338862 RTF1Q92541 710 aaKnown RBP17.34■□□□□ 0.37
PCDH8-201ENST00000338862 SULT6B1Q6IMI4 303 aa17.33■□□□□ 0.37
PCDH8-201ENST00000338862 ERVK-7P63135 1459 aa17.33■□□□□ 0.37
PCDH8-201ENST00000338862 SLC4A2P04920 1241 aa17.33■□□□□ 0.36
PCDH8-201ENST00000338862 DUOX2Q9NRD8 1548 aa17.33■□□□□ 0.36
PCDH8-201ENST00000338862 PRIM1P49642 420 aaKnown RBP17.33■□□□□ 0.36
PCDH8-201ENST00000338862 ZSCAN30Q86W11 494 aa17.33■□□□□ 0.36
PCDH8-201ENST00000338862 COG3Q96JB2 828 aa17.33■□□□□ 0.36
PCDH8-201ENST00000338862 PRDM10Q9NQV6 1147 aa17.32■□□□□ 0.36
PCDH8-201ENST00000338862 ADCY10Q96PN6 1610 aa17.32■□□□□ 0.36
PCDH8-201ENST00000338862 FBXO31Q5XUX0 539 aaPredicted RBP17.32■□□□□ 0.36
PCDH8-201ENST00000338862 DDX54Q8TDD1 881 aaKnown RBP17.32■□□□□ 0.36
PCDH8-201ENST00000338862 PTPRTO14522 1441 aa17.32■□□□□ 0.36
PCDH8-201ENST00000338862 RABEP1Q15276 862 aa17.32■□□□□ 0.36
PCDH8-201ENST00000338862 RRP9O43818 475 aaKnown RBP17.31■□□□□ 0.36
PCDH8-201ENST00000338862 PTMSP20962 102 aa17.31■□□□□ 0.36
PCDH8-201ENST00000338862 ZNF830Q96NB3 372 aaPredicted RBP17.31■□□□□ 0.36
PCDH8-201ENST00000338862 EIF2AK4Q9P2K8 1649 aaKnown RBP17.31■□□□□ 0.36
PCDH8-201ENST00000338862 TXNDC2Q86VQ3 553 aa17.31■□□□□ 0.36
PCDH8-201ENST00000338862 CIZ1Q9ULV3 898 aaPredicted RBP17.31■□□□□ 0.36
PCDH8-201ENST00000338862 ZBTB7BO15156 539 aaPredicted RBP17.31■□□□□ 0.36
PCDH8-201ENST00000338862 NFE2L2Q16236 605 aa17.31■□□□□ 0.36
PCDH8-201ENST00000338862 VAMP4O75379 141 aa17.3■□□□□ 0.36
PCDH8-201ENST00000338862 CT47B1P0C2W7 299 aaPredicted RBP17.3■□□□□ 0.36
PCDH8-201ENST00000338862 KCNJ4P48050 445 aa17.3■□□□□ 0.36
PCDH8-201ENST00000338862 PLCH2O75038 1416 aa17.3■□□□□ 0.36
PCDH8-201ENST00000338862 MCCP23508 829 aa17.3■□□□□ 0.36
PCDH8-201ENST00000338862 ZSCAN23Q3MJ62 389 aa17.3■□□□□ 0.36
PCDH8-201ENST00000338862 NUTM2GQ5VZR2 741 aa17.3■□□□□ 0.36
PCDH8-201ENST00000338862 IL1RAPL2Q9NP60 686 aa17.3■□□□□ 0.36
PCDH8-201ENST00000338862 FCHSD2O94868 740 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms