RNA–Protein interactions for RNA: ENST00000338758.11

PARVB-201, Transcript of parvin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARVB, Length 5,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-201ENST00000338758 KIAA0556O60303 1618 aa17.42■□□□□ 0.38
PARVB-201ENST00000338758 TMPOP42166 694 aaKnown RBP17.42■□□□□ 0.38
PARVB-201ENST00000338758 ZKSCAN1P17029 563 aaPredicted RBP17.41■□□□□ 0.38
PARVB-201ENST00000338758 AAMPQ13685 434 aa17.41■□□□□ 0.38
PARVB-201ENST00000338758 TEX14Q8IWB6 1497 aa17.41■□□□□ 0.38
PARVB-201ENST00000338758 FAM135AQ9P2D6 1515 aa17.41■□□□□ 0.38
PARVB-201ENST00000338758 KLHL34Q8N239 644 aa17.41■□□□□ 0.38
PARVB-201ENST00000338758 C1orf115Q9H7X2 142 aa17.41■□□□□ 0.38
PARVB-201ENST00000338758 NFE2L2Q16236 605 aa17.41■□□□□ 0.38
PARVB-201ENST00000338758 KIF3AQ9Y496 699 aa17.41■□□□□ 0.38
PARVB-201ENST00000338758 NUP160Q12769 1436 aa17.41■□□□□ 0.38
PARVB-201ENST00000338758 ZNF518AQ6AHZ1 1483 aa17.4■□□□□ 0.38
PARVB-201ENST00000338758 CLASRPQ8N2M8 674 aaKnown RBP17.39■□□□□ 0.38
PARVB-201ENST00000338758 NOL10Q9BSC4 688 aaKnown RBP17.39■□□□□ 0.38
PARVB-201ENST00000338758 PDE3AQ14432 1141 aa17.39■□□□□ 0.37
PARVB-201ENST00000338758 ERC2O15083 957 aa17.39■□□□□ 0.37
PARVB-201ENST00000338758 WWC1Q8IX03 1113 aa17.38■□□□□ 0.37
PARVB-201ENST00000338758 SCAF11Q99590 1463 aaKnown RBP17.38■□□□□ 0.37
PARVB-201ENST00000338758 FBXW7Q969H0 707 aa17.38■□□□□ 0.37
PARVB-201ENST00000338758 WDR62O43379 1518 aa17.38■□□□□ 0.37
PARVB-201ENST00000338758 MYL6BP14649 208 aa17.38■□□□□ 0.37
PARVB-201ENST00000338758 KIF6Q6ZMV9 814 aa17.38■□□□□ 0.37
PARVB-201ENST00000338758 CLSTN1O94985 981 aa17.38■□□□□ 0.37
PARVB-201ENST00000338758 USHBP1Q8N6Y0 703 aa17.38■□□□□ 0.37
PARVB-201ENST00000338758 DCTN1Q14203 1278 aa17.37■□□□□ 0.37
PARVB-201ENST00000338758 DRC7Q8IY82 874 aa17.37■□□□□ 0.37
PARVB-201ENST00000338758 MIS18AQ9NYP9 233 aa17.37■□□□□ 0.37
PARVB-201ENST00000338758 MCM10Q7L590 875 aa17.37■□□□□ 0.37
PARVB-201ENST00000338758 BTBD11A6QL63 1104 aa17.36■□□□□ 0.37
PARVB-201ENST00000338758 FOXD4L6Q3SYB3 417 aaPredicted RBP17.36■□□□□ 0.37
PARVB-201ENST00000338758 FOXD4L3Q6VB84 417 aaPredicted RBP17.36■□□□□ 0.37
PARVB-201ENST00000338758 ADAMTS2O95450 1211 aa17.36■□□□□ 0.37
PARVB-201ENST00000338758 ATF7IPQ6VMQ6 1270 aa17.36■□□□□ 0.37
PARVB-201ENST00000338758 FAM184AQ8NB25 1140 aa17.36■□□□□ 0.37
PARVB-201ENST00000338758 RASSF8Q8NHQ8 419 aa17.36■□□□□ 0.37
PARVB-201ENST00000338758 SRCIN1Q9C0H9 1055 aa17.35■□□□□ 0.37
PARVB-201ENST00000338758 UHRF1BP1LA0JNW5 1464 aa17.35■□□□□ 0.37
PARVB-201ENST00000338758 GNAT3A8MTJ3 354 aa17.35■□□□□ 0.37
PARVB-201ENST00000338758 GNAI2P04899 355 aa17.35■□□□□ 0.37
PARVB-201ENST00000338758 PTMSP20962 102 aa17.35■□□□□ 0.37
PARVB-201ENST00000338758 SF3A1Q15459 793 aaKnown RBP17.35■□□□□ 0.37
PARVB-201ENST00000338758 SYAP1Q96A49 352 aaPredicted RBP17.35■□□□□ 0.37
PARVB-201ENST00000338758 DUOX2Q9NRD8 1548 aa17.35■□□□□ 0.37
PARVB-201ENST00000338758 L1TD1Q5T7N2 865 aaKnown RBP17.34■□□□□ 0.37
PARVB-201ENST00000338758 INTS3Q68E01 1043 aaKnown RBP17.34■□□□□ 0.37
PARVB-201ENST00000338758 KRT28Q7Z3Y7 464 aa17.34■□□□□ 0.37
PARVB-201ENST00000338758 ABCC2Q92887 1545 aa17.34■□□□□ 0.37
PARVB-201ENST00000338758 CT47B1P0C2W7 299 aaPredicted RBP17.34■□□□□ 0.37
PARVB-201ENST00000338758 SYNE3Q6ZMZ3 975 aa17.34■□□□□ 0.37
PARVB-201ENST00000338758 H3BQV1 296 aa17.34■□□□□ 0.37
PARVB-201ENST00000338758 IFFO2Q5TF58 517 aa17.34■□□□□ 0.37
PARVB-201ENST00000338758 CPLX2Q6PUV4 134 aaKnown RBP17.34■□□□□ 0.37
PARVB-201ENST00000338758 ACEP12821 1306 aa17.33■□□□□ 0.37
PARVB-201ENST00000338758 ABCC10Q5T3U5 1492 aa17.33■□□□□ 0.37
PARVB-201ENST00000338758 WASHC4Q2M389 1173 aa17.33■□□□□ 0.37
PARVB-201ENST00000338758 CADPS2Q86UW7 1296 aa17.33■□□□□ 0.37
PARVB-201ENST00000338758 PTCD1O75127 700 aaKnown RBP17.33■□□□□ 0.36
PARVB-201ENST00000338758 AMOTL1Q8IY63 956 aa17.33■□□□□ 0.36
PARVB-201ENST00000338758 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.33■□□□□ 0.36
PARVB-201ENST00000338758 DISP1Q96F81 1524 aa17.33■□□□□ 0.36
PARVB-201ENST00000338758 RAD21O60216 631 aa17.33■□□□□ 0.36
PARVB-201ENST00000338758 AKAP17AQ02040 695 aaKnown RBP17.33■□□□□ 0.36
PARVB-201ENST00000338758 TRDNQ13061 729 aa17.33■□□□□ 0.36
PARVB-201ENST00000338758 RNF20Q5VTR2 975 aa17.33■□□□□ 0.36
PARVB-201ENST00000338758 DISP3Q9P2K9 1392 aa17.33■□□□□ 0.36
PARVB-201ENST00000338758 CCDC34Q96HJ3 373 aa17.33■□□□□ 0.36
PARVB-201ENST00000338758 CTTNBP2Q8WZ74 1663 aa17.32■□□□□ 0.36
PARVB-201ENST00000338758 CCT4P50991 539 aaKnown RBP17.32■□□□□ 0.36
PARVB-201ENST00000338758 FBLN1P23142 703 aa17.31■□□□□ 0.36
PARVB-201ENST00000338758 RTN4Q9NQC3 1192 aaKnown RBP17.31■□□□□ 0.36
PARVB-201ENST00000338758 SLFN5Q08AF3 891 aa17.31■□□□□ 0.36
PARVB-201ENST00000338758 DMRT2Q9Y5R5 561 aa17.31■□□□□ 0.36
PARVB-201ENST00000338758 PDZRN3Q9UPQ7 1066 aa17.31■□□□□ 0.36
PARVB-201ENST00000338758 CSPP1Q1MSJ5 1256 aa17.3■□□□□ 0.36
PARVB-201ENST00000338758 MARCH6O60337 910 aa17.3■□□□□ 0.36
PARVB-201ENST00000338758 AMER1Q5JTC6 1135 aaPredicted RBP17.3■□□□□ 0.36
PARVB-201ENST00000338758 CPLX1O14810 134 aa17.29■□□□□ 0.36
PARVB-201ENST00000338758 CHMP4CQ96CF2 233 aa17.29■□□□□ 0.36
PARVB-201ENST00000338758 FSD1Q9BTV5 496 aa17.29■□□□□ 0.36
PARVB-201ENST00000338758 TRIM34Q9BYJ4 488 aa17.29■□□□□ 0.36
PARVB-201ENST00000338758 CCDC27Q2M243 656 aa17.29■□□□□ 0.36
PARVB-201ENST00000338758 VPS53Q5VIR6 699 aa17.29■□□□□ 0.36
PARVB-201ENST00000338758 MCTP1Q6DN14 999 aa17.29■□□□□ 0.36
PARVB-201ENST00000338758 DUSP27Q5VZP5 1158 aa17.28■□□□□ 0.36
PARVB-201ENST00000338758 SIL1Q9H173 461 aa17.28■□□□□ 0.36
PARVB-201ENST00000338758 HSPA2P54652 639 aa17.28■□□□□ 0.36
PARVB-201ENST00000338758 CDC45O75419 566 aa17.28■□□□□ 0.36
PARVB-201ENST00000338758 DEKP35659 375 aaKnown RBP17.27■□□□□ 0.36
PARVB-201ENST00000338758 MVPQ14764 893 aaKnown RBP17.27■□□□□ 0.36
PARVB-201ENST00000338758 C22orf23Q9BZE7 217 aa17.27■□□□□ 0.36
PARVB-201ENST00000338758 MPRIPQ6WCQ1 1025 aa17.27■□□□□ 0.36
PARVB-201ENST00000338758 CNNM1Q9NRU3 951 aa17.27■□□□□ 0.36
PARVB-201ENST00000338758 ITSN2Q9NZM3 1697 aa17.27■□□□□ 0.35
PARVB-201ENST00000338758 DNAJC2Q99543 621 aaKnown RBP17.27■□□□□ 0.35
PARVB-201ENST00000338758 FYB1O15117 783 aa17.26■□□□□ 0.35
PARVB-201ENST00000338758 SF3B2Q13435 895 aaKnown RBP17.26■□□□□ 0.35
PARVB-201ENST00000338758 CHRNA2Q15822 529 aa17.26■□□□□ 0.35
PARVB-201ENST00000338758 NGLY1Q96IV0 654 aa17.26■□□□□ 0.35
PARVB-201ENST00000338758 RIMS2Q9UQ26 1411 aa17.26■□□□□ 0.35
PARVB-201ENST00000338758 AMOTQ4VCS5 1084 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms