RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 USP6P35125 1406 aa7.4□□□□□ -1.23
PRPF4B-201ENST00000337659 GGT6Q6P531 493 aa7.4□□□□□ -1.23
PRPF4B-201ENST00000337659 PLEKHG3A1L390 1219 aa7.39□□□□□ -1.23
PRPF4B-201ENST00000337659 ROBO1Q9Y6N7 1651 aa7.39□□□□□ -1.23
PRPF4B-201ENST00000337659 HDGFP51858 240 aaKnown RBP7.38□□□□□ -1.23
PRPF4B-201ENST00000337659 PLEKHH1Q9ULM0 1364 aa7.38□□□□□ -1.23
PRPF4B-201ENST00000337659 CGNL1Q0VF96 1302 aa7.38□□□□□ -1.23
PRPF4B-201ENST00000337659 CCDC27Q2M243 656 aa7.38□□□□□ -1.23
PRPF4B-201ENST00000337659 ILDR2Q71H61 639 aa7.38□□□□□ -1.23
PRPF4B-201ENST00000337659 GLI3P10071 1580 aa7.38□□□□□ -1.23
PRPF4B-201ENST00000337659 CENPBP07199 599 aaPredicted RBP7.37□□□□□ -1.23
PRPF4B-201ENST00000337659 PDE3BQ13370 1112 aa7.37□□□□□ -1.23
PRPF4B-201ENST00000337659 RTN4Q9NQC3 1192 aaKnown RBP7.37□□□□□ -1.23
PRPF4B-201ENST00000337659 ZNF831Q5JPB2 1677 aa7.37□□□□□ -1.23
PRPF4B-201ENST00000337659 OVOS2A0A0G2JMS6 1433 aa7.37□□□□□ -1.23
PRPF4B-201ENST00000337659 RTL1A6NKG5 1358 aa7.37□□□□□ -1.23
PRPF4B-201ENST00000337659 CCDC184Q52MB2 194 aa7.36□□□□□ -1.23
PRPF4B-201ENST00000337659 PHLPP1O60346 1717 aa7.36□□□□□ -1.23
PRPF4B-201ENST00000337659 PPP2R1AP30153 589 aa7.36□□□□□ -1.23
PRPF4B-201ENST00000337659 LRP5O75197 1615 aa7.36□□□□□ -1.23
PRPF4B-201ENST00000337659 IBTKQ9P2D0 1353 aaPredicted RBP7.36□□□□□ -1.23
PRPF4B-201ENST00000337659 PXDNQ92626 1479 aa7.36□□□□□ -1.23
PRPF4B-201ENST00000337659 PANK3Q9H999 370 aa7.36□□□□□ -1.23
PRPF4B-201ENST00000337659 UBR2Q8IWV8 1755 aa7.36□□□□□ -1.23
PRPF4B-201ENST00000337659 LTKP29376 864 aa7.35□□□□□ -1.23
PRPF4B-201ENST00000337659 MRC1P22897 1456 aa7.34□□□□□ -1.23
PRPF4B-201ENST00000337659 NRAPQ86VF7 1730 aa7.34□□□□□ -1.23
PRPF4B-201ENST00000337659 RGL3Q3MIN7 710 aa7.34□□□□□ -1.23
PRPF4B-201ENST00000337659 KDRP35968 1356 aa7.34□□□□□ -1.23
PRPF4B-201ENST00000337659 CACNA1FO60840 1977 aa7.34□□□□□ -1.24
PRPF4B-201ENST00000337659 RREB1Q92766 1687 aa7.33□□□□□ -1.24
PRPF4B-201ENST00000337659 PRR36Q9H6K5 1346 aa7.33□□□□□ -1.24
PRPF4B-201ENST00000337659 WASLO00401 505 aaPredicted RBP7.33□□□□□ -1.24
PRPF4B-201ENST00000337659 KDM2AQ9Y2K7 1162 aa7.33□□□□□ -1.24
PRPF4B-201ENST00000337659 LRP6O75581 1613 aa7.33□□□□□ -1.24
PRPF4B-201ENST00000337659 TUBGCP6Q96RT7 1819 aa7.33□□□□□ -1.24
PRPF4B-201ENST00000337659 LAMB4A4D0S4 1761 aa7.33□□□□□ -1.24
PRPF4B-201ENST00000337659 TTC21AQ8NDW8 1320 aa7.33□□□□□ -1.24
PRPF4B-201ENST00000337659 SCN11AQ9UI33 1791 aa7.32□□□□□ -1.24
PRPF4B-201ENST00000337659 THEMISQ8N1K5 641 aaPredicted RBP7.32□□□□□ -1.24
PRPF4B-201ENST00000337659 HSPA2P54652 639 aa7.32□□□□□ -1.24
PRPF4B-201ENST00000337659 PLEKHF1Q96S99 279 aa7.32□□□□□ -1.24
PRPF4B-201ENST00000337659 BCL11AQ9H165 835 aa7.32□□□□□ -1.24
PRPF4B-201ENST00000337659 USP19O94966 1318 aa7.31□□□□□ -1.24
PRPF4B-201ENST00000337659 HIRIP3Q9BW71 556 aaPredicted RBP7.3□□□□□ -1.24
PRPF4B-201ENST00000337659 IL16Q14005 1332 aa7.3□□□□□ -1.24
PRPF4B-201ENST00000337659 RGPD2P0DJD1 1756 aa7.3□□□□□ -1.24
PRPF4B-201ENST00000337659 ARHGEF10O15013 1369 aa7.3□□□□□ -1.24
PRPF4B-201ENST00000337659 NWD2Q9ULI1 1742 aa7.3□□□□□ -1.24
PRPF4B-201ENST00000337659 ZNF692Q9BU19 519 aaPredicted RBP7.29□□□□□ -1.24
PRPF4B-201ENST00000337659 SBNO1A3KN83 1393 aa7.29□□□□□ -1.24
PRPF4B-201ENST00000337659 BRPF1P55201 1214 aaPredicted RBP7.29□□□□□ -1.24
PRPF4B-201ENST00000337659 PRAM1Q96QH2 718 aa7.29□□□□□ -1.24
PRPF4B-201ENST00000337659 RGPD5Q99666 1765 aa7.28□□□□□ -1.24
PRPF4B-201ENST00000337659 RGPD3A6NKT7 1758 aaPredicted RBP7.28□□□□□ -1.24
PRPF4B-201ENST00000337659 RGPD4Q7Z3J3 1758 aa7.28□□□□□ -1.24
PRPF4B-201ENST00000337659 FYB1O15117 783 aa7.28□□□□□ -1.24
PRPF4B-201ENST00000337659 C1orf167Q5SNV9 1468 aa7.28□□□□□ -1.24
PRPF4B-201ENST00000337659 NUDCQ9Y266 331 aa7.27□□□□□ -1.25
PRPF4B-201ENST00000337659 CDK19Q9BWU1 502 aa7.27□□□□□ -1.25
PRPF4B-201ENST00000337659 ZNF326Q5BKZ1 582 aaKnown RBP7.27□□□□□ -1.25
PRPF4B-201ENST00000337659 COL14A1Q05707 1796 aaKnown RBP7.26□□□□□ -1.25
PRPF4B-201ENST00000337659 TMEM132EQ6IEE7 984 aa7.26□□□□□ -1.25
PRPF4B-201ENST00000337659 ZNF335Q9H4Z2 1342 aaPredicted RBP7.26□□□□□ -1.25
PRPF4B-201ENST00000337659 KCNA6P17658 529 aa7.26□□□□□ -1.25
PRPF4B-201ENST00000337659 TERF2IPQ9NYB0 399 aa7.26□□□□□ -1.25
PRPF4B-201ENST00000337659 KNSTRNQ9Y448 316 aa7.26□□□□□ -1.25
PRPF4B-201ENST00000337659 CT47B1P0C2W7 299 aaPredicted RBP7.25□□□□□ -1.25
PRPF4B-201ENST00000337659 TRAK1Q9UPV9 953 aa7.25□□□□□ -1.25
PRPF4B-201ENST00000337659 CCDC61Q9Y6R9 512 aa7.25□□□□□ -1.25
PRPF4B-201ENST00000337659 C5P01031 1676 aa7.25□□□□□ -1.25
PRPF4B-201ENST00000337659 TOM1O60784 492 aa7.24□□□□□ -1.25
PRPF4B-201ENST00000337659 MRS2Q9HD23 443 aa7.24□□□□□ -1.25
PRPF4B-201ENST00000337659 CPDO75976 1380 aa7.24□□□□□ -1.25
PRPF4B-201ENST00000337659 WDR63Q8IWG1 891 aa7.24□□□□□ -1.25
PRPF4B-201ENST00000337659 NUP188Q5SRE5 1749 aa7.24□□□□□ -1.25
PRPF4B-201ENST00000337659 CEBPAP49715 358 aaPredicted RBP7.24□□□□□ -1.25
PRPF4B-201ENST00000337659 SLC12A5Q9H2X9 1139 aa7.23□□□□□ -1.25
PRPF4B-201ENST00000337659 EID1Q9Y6B2 187 aa7.23□□□□□ -1.25
PRPF4B-201ENST00000337659 PXDNLA1KZ92 1463 aa7.23□□□□□ -1.25
PRPF4B-201ENST00000337659 TTC21BQ7Z4L5 1316 aa7.23□□□□□ -1.25
PRPF4B-201ENST00000337659 NCKAP5LQ9HCH0 1330 aa7.23□□□□□ -1.25
PRPF4B-201ENST00000337659 TOGARAM1Q9Y4F4 1720 aa7.23□□□□□ -1.25
PRPF4B-201ENST00000337659 SLFN5Q08AF3 891 aa7.23□□□□□ -1.25
PRPF4B-201ENST00000337659 DUSP27Q5VZP5 1158 aa7.23□□□□□ -1.25
PRPF4B-201ENST00000337659 IL13P35225 146 aa7.22□□□□□ -1.25
PRPF4B-201ENST00000337659 NUDT16Q96DE0 195 aaKnown RBP7.22□□□□□ -1.25
PRPF4B-201ENST00000337659 CRB1P82279 1406 aa7.22□□□□□ -1.25
PRPF4B-201ENST00000337659 COL24A1Q17RW2 1714 aa7.22□□□□□ -1.25
PRPF4B-201ENST00000337659 ZNF853P0CG23 659 aa7.21□□□□□ -1.25
PRPF4B-201ENST00000337659 AAMPQ13685 434 aa7.21□□□□□ -1.25
PRPF4B-201ENST00000337659 TXNDC2Q86VQ3 553 aa7.21□□□□□ -1.25
PRPF4B-201ENST00000337659 ANKLE2Q86XL3 938 aa7.21□□□□□ -1.25
PRPF4B-201ENST00000337659 SUPT16HQ9Y5B9 1047 aaKnown RBP7.21□□□□□ -1.25
PRPF4B-201ENST00000337659 SOS1Q07889 1333 aaPredicted RBP7.21□□□□□ -1.26
PRPF4B-201ENST00000337659 RSPH6AQ9H0K4 717 aa7.21□□□□□ -1.26
PRPF4B-201ENST00000337659 AMOTL2Q9Y2J4 779 aa7.21□□□□□ -1.26
PRPF4B-201ENST00000337659 IGSF1Q8N6C5 1336 aa7.21□□□□□ -1.26
PRPF4B-201ENST00000337659 RGS17Q9UGC6 210 aaPredicted RBP7.2□□□□□ -1.26
PRPF4B-201ENST00000337659 POLKQ9UBT6 870 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms