RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 PTPRMP28827 1452 aa22.74■■□□□ 1.23
IFFO1-201ENST00000336604 RWDD1Q9H446 243 aaPredicted RBP22.73■■□□□ 1.23
IFFO1-201ENST00000336604 SMC4Q9NTJ3 1288 aa22.73■■□□□ 1.23
IFFO1-201ENST00000336604 TERF2IPQ9NYB0 399 aa22.73■■□□□ 1.23
IFFO1-201ENST00000336604 FBXO31Q5XUX0 539 aaPredicted RBP22.73■■□□□ 1.23
IFFO1-201ENST00000336604 DZIP1LQ8IYY4 767 aaKnown RBP22.73■■□□□ 1.23
IFFO1-201ENST00000336604 ATAD2Q6PL18 1390 aa22.72■■□□□ 1.23
IFFO1-201ENST00000336604 MYO5BQ9ULV0 1848 aa22.72■■□□□ 1.23
IFFO1-201ENST00000336604 COL3A1P02461 1466 aaPredicted RBP22.71■■□□□ 1.23
IFFO1-201ENST00000336604 NLRP1Q9C000 1473 aa22.71■■□□□ 1.23
IFFO1-201ENST00000336604 CD163L1Q9NR16 1453 aa22.71■■□□□ 1.23
IFFO1-201ENST00000336604 TRIM27P14373 513 aa22.7■■□□□ 1.22
IFFO1-201ENST00000336604 SSH1Q8WYL5 1049 aa22.7■■□□□ 1.22
IFFO1-201ENST00000336604 YTHDC2Q9H6S0 1430 aaKnown RBP22.7■■□□□ 1.22
IFFO1-201ENST00000336604 RICTORQ6R327 1708 aa22.69■■□□□ 1.22
IFFO1-201ENST00000336604 TMEM131LA2VDJ0 1609 aa22.69■■□□□ 1.22
IFFO1-201ENST00000336604 CT47B1P0C2W7 299 aaPredicted RBP22.68■■□□□ 1.22
IFFO1-201ENST00000336604 RIPK4P57078 832 aa22.68■■□□□ 1.22
IFFO1-201ENST00000336604 CABP1Q9NZU7 370 aa22.67■■□□□ 1.22
IFFO1-201ENST00000336604 CDK19Q9BWU1 502 aa22.67■■□□□ 1.22
IFFO1-201ENST00000336604 DIAPH1O60610 1272 aaKnown RBP22.66■■□□□ 1.22
IFFO1-201ENST00000336604 ITPRIPQ8IWB1 547 aa22.66■■□□□ 1.22
IFFO1-201ENST00000336604 FBLN1P23142 703 aa22.65■■□□□ 1.22
IFFO1-201ENST00000336604 PREX1Q8TCU6 1659 aa22.65■■□□□ 1.22
IFFO1-201ENST00000336604 HDGFL2Q7Z4V5 671 aaPredicted RBP22.65■■□□□ 1.22
IFFO1-201ENST00000336604 NOB1Q9ULX3 412 aaKnown RBP22.65■■□□□ 1.22
IFFO1-201ENST00000336604 ATF7IPQ6VMQ6 1270 aa22.64■■□□□ 1.21
IFFO1-201ENST00000336604 UPF2Q9HAU5 1272 aaKnown RBP22.64■■□□□ 1.21
IFFO1-201ENST00000336604 BECN1Q14457 450 aa22.64■■□□□ 1.21
IFFO1-201ENST00000336604 TBC1D32Q96NH3 1257 aa22.64■■□□□ 1.21
IFFO1-201ENST00000336604 SLKQ9H2G2 1235 aaPredicted RBP22.64■■□□□ 1.21
IFFO1-201ENST00000336604 STAG3Q9UJ98 1225 aa22.63■■□□□ 1.21
IFFO1-201ENST00000336604 ZMYM3Q14202 1370 aa22.63■■□□□ 1.21
IFFO1-201ENST00000336604 MED14O60244 1454 aa22.63■■□□□ 1.21
IFFO1-201ENST00000336604 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.63■■□□□ 1.21
IFFO1-201ENST00000336604 PNPLA6Q8IY17 1366 aa22.61■■□□□ 1.21
IFFO1-201ENST00000336604 IL16Q14005 1332 aa22.61■■□□□ 1.21
IFFO1-201ENST00000336604 DDX19BQ9UMR2 479 aa22.61■■□□□ 1.21
IFFO1-201ENST00000336604 ALKQ9UM73 1620 aa22.6■■□□□ 1.21
IFFO1-201ENST00000336604 ARHGEF40Q8TER5 1519 aa22.6■■□□□ 1.21
IFFO1-201ENST00000336604 UBE2Q2Q8WVN8 375 aa22.6■■□□□ 1.21
IFFO1-201ENST00000336604 TMEM57Q8N5G2 664 aa22.6■■□□□ 1.21
IFFO1-201ENST00000336604 WAPLQ7Z5K2 1190 aa22.59■■□□□ 1.21
IFFO1-201ENST00000336604 CLTCQ00610 1675 aaKnown RBP22.59■■□□□ 1.21
IFFO1-201ENST00000336604 ANKRD26Q9UPS8 1709 aa22.58■■□□□ 1.21
IFFO1-201ENST00000336604 HDAC1Q13547 482 aaPredicted RBP22.58■■□□□ 1.2
IFFO1-201ENST00000336604 PRKAR2BP31323 418 aa22.57■■□□□ 1.2
IFFO1-201ENST00000336604 TBC1D2Q9BYX2 928 aa22.56■■□□□ 1.2
IFFO1-201ENST00000336604 POLKQ9UBT6 870 aa22.56■■□□□ 1.2
IFFO1-201ENST00000336604 FCHSD2O94868 740 aa22.55■■□□□ 1.2
IFFO1-201ENST00000336604 PNNQ9H307 717 aaKnown RBP22.55■■□□□ 1.2
IFFO1-201ENST00000336604 ZBTB40Q9NUA8 1239 aa22.55■■□□□ 1.2
IFFO1-201ENST00000336604 RSPH6AQ9H0K4 717 aa22.54■■□□□ 1.2
IFFO1-201ENST00000336604 ANTXR1Q9H6X2 564 aa22.54■■□□□ 1.2
IFFO1-201ENST00000336604 LRRC7Q96NW7 1537 aa22.54■■□□□ 1.2
IFFO1-201ENST00000336604 KIF16BQ96L93 1317 aa22.54■■□□□ 1.2
IFFO1-201ENST00000336604 HMOX1P09601 288 aa22.54■■□□□ 1.2
IFFO1-201ENST00000336604 PHACTR3Q96KR7 559 aa22.53■■□□□ 1.2
IFFO1-201ENST00000336604 MFAP1P55081 439 aaKnown RBP22.52■■□□□ 1.2
IFFO1-201ENST00000336604 SMC5Q8IY18 1101 aa22.52■■□□□ 1.2
IFFO1-201ENST00000336604 THUMPD2Q9BTF0 503 aaKnown RBP22.52■■□□□ 1.2
IFFO1-201ENST00000336604 IPO8O15397 1037 aaKnown RBP22.52■■□□□ 1.2
IFFO1-201ENST00000336604 CYB5RLQ6IPT4 315 aa22.51■■□□□ 1.19
IFFO1-201ENST00000336604 FAM135BQ49AJ0 1406 aa22.5■■□□□ 1.19
IFFO1-201ENST00000336604 SPRYD3Q8NCJ5 442 aa22.5■■□□□ 1.19
IFFO1-201ENST00000336604 EMILIN1Q9Y6C2 1016 aa22.5■■□□□ 1.19
IFFO1-201ENST00000336604 KIF20BQ96Q89 1820 aa22.49■■□□□ 1.19
IFFO1-201ENST00000336604 ALDH1L2Q3SY69 923 aa22.49■■□□□ 1.19
IFFO1-201ENST00000336604 C22orf23Q9BZE7 217 aa22.49■■□□□ 1.19
IFFO1-201ENST00000336604 FAM69CQ0P6D2 419 aa22.47■■□□□ 1.19
IFFO1-201ENST00000336604 CDC42BPGQ6DT37 1551 aa22.47■■□□□ 1.19
IFFO1-201ENST00000336604 ZRANB1Q9UGI0 708 aa22.46■■□□□ 1.19
IFFO1-201ENST00000336604 A2ML1A8K2U0 1454 aa22.46■■□□□ 1.19
IFFO1-201ENST00000336604 NFE2L2Q16236 605 aa22.46■■□□□ 1.19
IFFO1-201ENST00000336604 NME9Q86XW9 330 aa22.46■■□□□ 1.19
IFFO1-201ENST00000336604 LNPKQ9C0E8 428 aa22.46■■□□□ 1.19
IFFO1-201ENST00000336604 ATP7BP35670 1465 aa22.45■■□□□ 1.19
IFFO1-201ENST00000336604 TSPYL6Q8N831 410 aa22.45■■□□□ 1.19
IFFO1-201ENST00000336604 MLECQ14165 292 aa22.45■■□□□ 1.18
IFFO1-201ENST00000336604 ELL2O00472 640 aaPredicted RBP22.44■■□□□ 1.18
IFFO1-201ENST00000336604 RIMS2Q9UQ26 1411 aa22.44■■□□□ 1.18
IFFO1-201ENST00000336604 NUCB1Q02818 461 aa22.44■■□□□ 1.18
IFFO1-201ENST00000336604 NCKAP5LQ9HCH0 1330 aa22.43■■□□□ 1.18
IFFO1-201ENST00000336604 VAMP4O75379 141 aa22.43■■□□□ 1.18
IFFO1-201ENST00000336604 IL13P35225 146 aa22.42■■□□□ 1.18
IFFO1-201ENST00000336604 FAM43AQ8N2R8 423 aa22.42■■□□□ 1.18
IFFO1-201ENST00000336604 DLC1Q96QB1 1528 aa22.42■■□□□ 1.18
IFFO1-201ENST00000336604 C1orf115Q9H7X2 142 aa22.42■■□□□ 1.18
IFFO1-201ENST00000336604 PPIP5K1Q6PFW1 1433 aa22.41■■□□□ 1.18
IFFO1-201ENST00000336604 WASLO00401 505 aaPredicted RBP22.41■■□□□ 1.18
IFFO1-201ENST00000336604 TXNDC2Q86VQ3 553 aa22.41■■□□□ 1.18
IFFO1-201ENST00000336604 CHD1LQ86WJ1 897 aa22.4■■□□□ 1.18
IFFO1-201ENST00000336604 ZNF428Q96B54 188 aa22.4■■□□□ 1.18
IFFO1-201ENST00000336604 MBIPQ9NS73 344 aa22.4■■□□□ 1.18
IFFO1-201ENST00000336604 MAP2P11137 1827 aaKnown RBP22.4■■□□□ 1.18
IFFO1-201ENST00000336604 CPSF1Q10570 1443 aaKnown RBP22.4■■□□□ 1.18
IFFO1-201ENST00000336604 ZBTB7BO15156 539 aaPredicted RBP22.4■■□□□ 1.18
IFFO1-201ENST00000336604 BRPF1P55201 1214 aaPredicted RBP22.4■■□□□ 1.18
IFFO1-201ENST00000336604 RRS1Q15050 365 aaKnown RBP22.4■■□□□ 1.18
IFFO1-201ENST00000336604 MRPL50Q8N5N7 158 aaKnown RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms