RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 PUS7Q96PZ0 661 aaKnown RBP25.91■■□□□ 1.74
HLA-F-217ENST00000334668 ATAD2Q6PL18 1390 aa25.91■■□□□ 1.74
HLA-F-217ENST00000334668 CABP1Q9NZU7 370 aa25.89■■□□□ 1.74
HLA-F-217ENST00000334668 ARHGEF10O15013 1369 aa25.88■■□□□ 1.73
HLA-F-217ENST00000334668 NUTM2BA6NNL0 878 aaPredicted RBP25.87■■□□□ 1.73
HLA-F-217ENST00000334668 NUTM2EB1AL46 878 aaPredicted RBP25.87■■□□□ 1.73
HLA-F-217ENST00000334668 NUTM2AQ8IVF1 878 aaPredicted RBP25.87■■□□□ 1.73
HLA-F-217ENST00000334668 RGS17Q9UGC6 210 aaPredicted RBP25.86■■□□□ 1.73
HLA-F-217ENST00000334668 AKAP12Q02952 1782 aa25.84■■□□□ 1.73
HLA-F-217ENST00000334668 BRD4O60885 1362 aaPredicted RBP25.84■■□□□ 1.73
HLA-F-217ENST00000334668 MARF1Q9Y4F3 1742 aaKnown RBP25.83■■□□□ 1.73
HLA-F-217ENST00000334668 ABCA3Q99758 1704 aa25.83■■□□□ 1.72
HLA-F-217ENST00000334668 USP6P35125 1406 aa25.81■■□□□ 1.72
HLA-F-217ENST00000334668 CPSF1Q10570 1443 aaKnown RBP25.81■■□□□ 1.72
HLA-F-217ENST00000334668 MEX3CQ5U5Q3 659 aaKnown RBP25.81■■□□□ 1.72
HLA-F-217ENST00000334668 SSH2Q76I76 1423 aa25.8■■□□□ 1.72
HLA-F-217ENST00000334668 CRYBG1Q9Y4K1 1723 aa25.8■■□□□ 1.72
HLA-F-217ENST00000334668 TMF1P82094 1093 aa25.79■■□□□ 1.72
HLA-F-217ENST00000334668 ZNF692Q9BU19 519 aaPredicted RBP25.79■■□□□ 1.72
HLA-F-217ENST00000334668 PAK3O75914 559 aaPredicted RBP25.78■■□□□ 1.72
HLA-F-217ENST00000334668 LMOD2Q6P5Q4 547 aa25.78■■□□□ 1.72
HLA-F-217ENST00000334668 CD163L1Q9NR16 1453 aa25.78■■□□□ 1.72
HLA-F-217ENST00000334668 ADAMTS2O95450 1211 aa25.77■■□□□ 1.72
HLA-F-217ENST00000334668 EIF4G2P78344 907 aaKnown RBP eCLIP25.77■■□□□ 1.72
HLA-F-217ENST00000334668 MON2Q7Z3U7 1717 aa25.77■■□□□ 1.72
HLA-F-217ENST00000334668 NINLQ9Y2I6 1382 aa25.76■■□□□ 1.71
HLA-F-217ENST00000334668 CABLES1Q8TDN4 633 aa25.75■■□□□ 1.71
HLA-F-217ENST00000334668 SLC12A5Q9H2X9 1139 aa25.75■■□□□ 1.71
HLA-F-217ENST00000334668 NRKQ7Z2Y5 1582 aa25.74■■□□□ 1.71
HLA-F-217ENST00000334668 HSPA5P11021 654 aaKnown RBP25.74■■□□□ 1.71
HLA-F-217ENST00000334668 C8orf37Q96NL8 207 aa25.74■■□□□ 1.71
HLA-F-217ENST00000334668 AFF2P51816 1311 aa25.73■■□□□ 1.71
HLA-F-217ENST00000334668 CDCA8Q53HL2 280 aa25.72■■□□□ 1.71
HLA-F-217ENST00000334668 POTEAQ6S8J7 498 aa25.72■■□□□ 1.71
HLA-F-217ENST00000334668 ILDR2Q71H61 639 aa25.72■■□□□ 1.71
HLA-F-217ENST00000334668 FNBP4Q8N3X1 1017 aaPredicted RBP25.72■■□□□ 1.71
HLA-F-217ENST00000334668 ZNF772Q68DY9 489 aaPredicted RBP25.71■■□□□ 1.71
HLA-F-217ENST00000334668 TMC1Q8TDI8 760 aa25.71■■□□□ 1.71
HLA-F-217ENST00000334668 KTN1Q86UP2 1357 aaKnown RBP25.7■■□□□ 1.71
HLA-F-217ENST00000334668 ABTB2Q8N961 1025 aa25.7■■□□□ 1.7
HLA-F-217ENST00000334668 NGLY1Q96IV0 654 aa25.7■■□□□ 1.7
HLA-F-217ENST00000334668 PHRF1Q9P1Y6 1649 aaKnown RBP25.7■■□□□ 1.7
HLA-F-217ENST00000334668 USP19O94966 1318 aa25.69■■□□□ 1.7
HLA-F-217ENST00000334668 TTC21BQ7Z4L5 1316 aa25.69■■□□□ 1.7
HLA-F-217ENST00000334668 PIK3C2AO00443 1686 aa25.69■■□□□ 1.7
HLA-F-217ENST00000334668 A0A1W2PP64 1363 aa25.68■■□□□ 1.7
HLA-F-217ENST00000334668 TTC21AQ8NDW8 1320 aa25.67■■□□□ 1.7
HLA-F-217ENST00000334668 HDGFL2Q7Z4V5 671 aaPredicted RBP25.67■■□□□ 1.7
HLA-F-217ENST00000334668 TERF2IPQ9NYB0 399 aa25.67■■□□□ 1.7
HLA-F-217ENST00000334668 HAP1P54257 671 aaPredicted RBP25.66■■□□□ 1.7
HLA-F-217ENST00000334668 NUTM2GQ5VZR2 741 aa25.66■■□□□ 1.7
HLA-F-217ENST00000334668 NLRP13Q86W25 1043 aa25.66■■□□□ 1.7
HLA-F-217ENST00000334668 SLIT2O94813 1529 aa25.66■■□□□ 1.7
HLA-F-217ENST00000334668 EDC4Q6P2E9 1401 aaKnown RBP25.65■■□□□ 1.7
HLA-F-217ENST00000334668 BCL9LQ86UU0 1499 aa25.65■■□□□ 1.7
HLA-F-217ENST00000334668 MYOM1P52179 1685 aa25.64■■□□□ 1.7
HLA-F-217ENST00000334668 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.64■■□□□ 1.7
HLA-F-217ENST00000334668 PLEKHG5O94827 1062 aa25.64■■□□□ 1.7
HLA-F-217ENST00000334668 NWD2Q9ULI1 1742 aa25.63■■□□□ 1.69
HLA-F-217ENST00000334668 ANKRD36BQ8N2N9 1353 aa25.63■■□□□ 1.69
HLA-F-217ENST00000334668 USP54Q70EL1 1684 aa25.63■■□□□ 1.69
HLA-F-217ENST00000334668 PLCH1Q4KWH8 1693 aa25.62■■□□□ 1.69
HLA-F-217ENST00000334668 FAM83GA6ND36 823 aa25.62■■□□□ 1.69
HLA-F-217ENST00000334668 USP21Q9UK80 565 aa25.62■■□□□ 1.69
HLA-F-217ENST00000334668 SLIT3O75094 1523 aa25.62■■□□□ 1.69
HLA-F-217ENST00000334668 NLRP6P59044 892 aa25.61■■□□□ 1.69
HLA-F-217ENST00000334668 COL14A1Q05707 1796 aaKnown RBP25.61■■□□□ 1.69
HLA-F-217ENST00000334668 USP31Q70CQ4 1352 aa25.59■■□□□ 1.69
HLA-F-217ENST00000334668 QTRT2Q9H974 415 aaKnown RBP25.59■■□□□ 1.69
HLA-F-217ENST00000334668 SPINK5Q9NQ38 1064 aaPredicted RBP25.59■■□□□ 1.69
HLA-F-217ENST00000334668 ATRNO75882 1429 aa25.59■■□□□ 1.69
HLA-F-217ENST00000334668 CPDO75976 1380 aa25.58■■□□□ 1.69
HLA-F-217ENST00000334668 GCP02774 474 aa25.58■■□□□ 1.69
HLA-F-217ENST00000334668 UNC5CLQ8IV45 518 aa25.57■■□□□ 1.68
HLA-F-217ENST00000334668 KIAA0232Q92628 1395 aa25.56■■□□□ 1.68
HLA-F-217ENST00000334668 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.56■■□□□ 1.68
HLA-F-217ENST00000334668 TRPC5Q9UL62 973 aaPredicted RBP25.56■■□□□ 1.68
HLA-F-217ENST00000334668 NRAPQ86VF7 1730 aa25.55■■□□□ 1.68
HLA-F-217ENST00000334668 C11orf95C9JLR9 678 aaPredicted RBP25.55■■□□□ 1.68
HLA-F-217ENST00000334668 ZC3H6P61129 1189 aaKnown RBP25.54■■□□□ 1.68
HLA-F-217ENST00000334668 NME9Q86XW9 330 aa25.54■■□□□ 1.68
HLA-F-217ENST00000334668 PRDM11Q9NQV5 511 aa25.54■■□□□ 1.68
HLA-F-217ENST00000334668 RXRBP28702 533 aa25.53■■□□□ 1.68
HLA-F-217ENST00000334668 CDK12Q9NYV4 1490 aaPredicted RBP25.53■■□□□ 1.68
HLA-F-217ENST00000334668 CAPN15O75808 1086 aa25.52■■□□□ 1.68
HLA-F-217ENST00000334668 RBM6P78332 1123 aaKnown RBP25.52■■□□□ 1.68
HLA-F-217ENST00000334668 ZRANB1Q9UGI0 708 aa25.52■■□□□ 1.68
HLA-F-217ENST00000334668 LMO7Q8WWI1 1683 aa25.52■■□□□ 1.68
HLA-F-217ENST00000334668 OVOS2A0A0J9YW53 1432 aa25.51■■□□□ 1.67
HLA-F-217ENST00000334668 OVOS2Q6IE36 1432 aa25.51■■□□□ 1.67
HLA-F-217ENST00000334668 NFAT5O94916 1531 aa25.51■■□□□ 1.67
HLA-F-217ENST00000334668 KCNH5Q8NCM2 988 aa25.5■■□□□ 1.67
HLA-F-217ENST00000334668 BTG4Q9NY30 223 aa25.5■■□□□ 1.67
HLA-F-217ENST00000334668 CHRNA2Q15822 529 aa25.49■■□□□ 1.67
HLA-F-217ENST00000334668 CARD14Q9BXL6 1004 aa25.49■■□□□ 1.67
HLA-F-217ENST00000334668 COL18A1P39060 1754 aa25.49■■□□□ 1.67
HLA-F-217ENST00000334668 VPS72Q15906 364 aa25.48■■□□□ 1.67
HLA-F-217ENST00000334668 GJD4Q96KN9 370 aaPredicted RBP25.47■■□□□ 1.67
HLA-F-217ENST00000334668 CAMTA1Q9Y6Y1 1673 aa25.46■■□□□ 1.67
HLA-F-217ENST00000334668 ARHGEF25Q86VW2 580 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms