RNA–Protein interactions for RNA: ENST00000334271.7

AP1S3-201, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 2

Gene AP1S3, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-201ENST00000334271 CDC42BPGQ6DT37 1551 aa14□□□□□ -0.17
AP1S3-201ENST00000334271 SIPA1L2Q9P2F8 1722 aaPredicted RBP14□□□□□ -0.17
AP1S3-201ENST00000334271 NCOA3Q9Y6Q9 1424 aa14□□□□□ -0.17
AP1S3-201ENST00000334271 TMC1Q8TDI8 760 aa13.99□□□□□ -0.17
AP1S3-201ENST00000334271 NSD3Q9BZ95 1437 aa13.99□□□□□ -0.17
AP1S3-201ENST00000334271 AKAP12Q02952 1782 aa13.99□□□□□ -0.17
AP1S3-201ENST00000334271 MINK1Q8N4C8 1332 aaPredicted RBP13.99□□□□□ -0.17
AP1S3-201ENST00000334271 NKTRP30414 1462 aaKnown RBP13.99□□□□□ -0.17
AP1S3-201ENST00000334271 ZNF692Q9BU19 519 aaPredicted RBP13.99□□□□□ -0.17
AP1S3-201ENST00000334271 AMOTL2Q9Y2J4 779 aa13.99□□□□□ -0.17
AP1S3-201ENST00000334271 ZNF592Q92610 1267 aa13.98□□□□□ -0.17
AP1S3-201ENST00000334271 CPSF1Q10570 1443 aaKnown RBP13.98□□□□□ -0.17
AP1S3-201ENST00000334271 MON2Q7Z3U7 1717 aa13.98□□□□□ -0.17
AP1S3-201ENST00000334271 CD163L1Q9NR16 1453 aa13.98□□□□□ -0.17
AP1S3-201ENST00000334271 PLEKHH1Q9ULM0 1364 aa13.97□□□□□ -0.17
AP1S3-201ENST00000334271 KIF20BQ96Q89 1820 aa13.97□□□□□ -0.17
AP1S3-201ENST00000334271 NPM3O75607 178 aaKnown RBP13.97□□□□□ -0.17
AP1S3-201ENST00000334271 CARD14Q9BXL6 1004 aa13.97□□□□□ -0.17
AP1S3-201ENST00000334271 CCDC61Q9Y6R9 512 aa13.97□□□□□ -0.17
AP1S3-201ENST00000334271 EDC4Q6P2E9 1401 aaKnown RBP13.97□□□□□ -0.17
AP1S3-201ENST00000334271 PNISRQ8TF01 805 aaKnown RBP13.96□□□□□ -0.17
AP1S3-201ENST00000334271 SLC12A5Q9H2X9 1139 aa13.96□□□□□ -0.17
AP1S3-201ENST00000334271 CABP2Q9NPB3 220 aa13.96□□□□□ -0.17
AP1S3-201ENST00000334271 WAPLQ7Z5K2 1190 aa13.96□□□□□ -0.17
AP1S3-201ENST00000334271 ZFP91Q96JP5 570 aaPredicted RBP13.96□□□□□ -0.17
AP1S3-201ENST00000334271 A0A1W2PP64 1363 aa13.96□□□□□ -0.17
AP1S3-201ENST00000334271 RBM10P98175 930 aaKnown RBP13.95□□□□□ -0.18
AP1S3-201ENST00000334271 FMN2Q9NZ56 1722 aa13.95□□□□□ -0.18
AP1S3-201ENST00000334271 PLEKHG3A1L390 1219 aa13.95□□□□□ -0.18
AP1S3-201ENST00000334271 KCNA6P17658 529 aa13.95□□□□□ -0.18
AP1S3-201ENST00000334271 SLC26A8Q96RN1 970 aa13.95□□□□□ -0.18
AP1S3-201ENST00000334271 POLR3AO14802 1390 aaPredicted RBP13.94□□□□□ -0.18
AP1S3-201ENST00000334271 PPIP5K1Q6PFW1 1433 aa13.94□□□□□ -0.18
AP1S3-201ENST00000334271 PPP2R1AP30153 589 aa13.94□□□□□ -0.18
AP1S3-201ENST00000334271 NGEFQ8N5V2 710 aa13.94□□□□□ -0.18
AP1S3-201ENST00000334271 CC2D1BQ5T0F9 858 aaKnown RBP13.93□□□□□ -0.18
AP1S3-201ENST00000334271 NUDT16Q96DE0 195 aaKnown RBP13.93□□□□□ -0.18
AP1S3-201ENST00000334271 SAFB2Q14151 953 aaKnown RBP eCLIP13.92□□□□□ -0.18
AP1S3-201ENST00000334271 ZBED9Q6R2W3 1325 aa13.92□□□□□ -0.18
AP1S3-201ENST00000334271 ADGRL3Q9HAR2 1447 aa13.92□□□□□ -0.18
AP1S3-201ENST00000334271 YTHDC1Q96MU7 727 aaKnown RBP13.91□□□□□ -0.18
AP1S3-201ENST00000334271 LRRC7Q96NW7 1537 aa13.91□□□□□ -0.18
AP1S3-201ENST00000334271 NRKQ7Z2Y5 1582 aa13.91□□□□□ -0.18
AP1S3-201ENST00000334271 MORC1Q86VD1 984 aa13.9□□□□□ -0.18
AP1S3-201ENST00000334271 DCCP43146 1447 aa13.9□□□□□ -0.18
AP1S3-201ENST00000334271 BLMP54132 1417 aaPredicted RBP13.9□□□□□ -0.18
AP1S3-201ENST00000334271 USP54Q70EL1 1684 aa13.9□□□□□ -0.18
AP1S3-201ENST00000334271 ERICH6BQ5W0A0 696 aa13.9□□□□□ -0.18
AP1S3-201ENST00000334271 CABP1Q9NZU7 370 aa13.9□□□□□ -0.18
AP1S3-201ENST00000334271 SALL2Q9Y467 1007 aaPredicted RBP13.9□□□□□ -0.18
AP1S3-201ENST00000334271 CLSTN1O94985 981 aa13.89□□□□□ -0.19
AP1S3-201ENST00000334271 TSHZ2Q9NRE2 1034 aa13.89□□□□□ -0.19
AP1S3-201ENST00000334271 NALCNQ8IZF0 1738 aa13.89□□□□□ -0.19
AP1S3-201ENST00000334271 LMTK3Q96Q04 1460 aa13.88□□□□□ -0.19
AP1S3-201ENST00000334271 AATKQ6ZMQ8 1374 aa13.88□□□□□ -0.19
AP1S3-201ENST00000334271 TTC21AQ8NDW8 1320 aa13.88□□□□□ -0.19
AP1S3-201ENST00000334271 CCDC184Q52MB2 194 aa13.88□□□□□ -0.19
AP1S3-201ENST00000334271 KDM4FA0A1W2PPD8 638 aa13.87□□□□□ -0.19
AP1S3-201ENST00000334271 TMED8Q6PL24 325 aaPredicted RBP13.87□□□□□ -0.19
AP1S3-201ENST00000334271 CFAP53Q96M91 514 aa13.87□□□□□ -0.19
AP1S3-201ENST00000334271 SSH2Q76I76 1423 aa13.85□□□□□ -0.19
AP1S3-201ENST00000334271 SMG6Q86US8 1419 aaKnown RBP13.85□□□□□ -0.19
AP1S3-201ENST00000334271 FYB1O15117 783 aa13.85□□□□□ -0.19
AP1S3-201ENST00000334271 HNRNPUQ00839 825 aaKnown RBP eCLIP13.85□□□□□ -0.19
AP1S3-201ENST00000334271 PDE3BQ13370 1112 aa13.85□□□□□ -0.19
AP1S3-201ENST00000334271 FAM9BQ8IZU0 186 aa13.85□□□□□ -0.19
AP1S3-201ENST00000334271 KIF1AQ12756 1690 aa13.85□□□□□ -0.19
AP1S3-201ENST00000334271 USP6P35125 1406 aa13.85□□□□□ -0.19
AP1S3-201ENST00000334271 PRR36Q9H6K5 1346 aa13.85□□□□□ -0.19
AP1S3-201ENST00000334271 ZNF428Q96B54 188 aa13.84□□□□□ -0.19
AP1S3-201ENST00000334271 WDR43Q15061 677 aaKnown RBP eCLIP13.84□□□□□ -0.19
AP1S3-201ENST00000334271 PSMD1Q99460 953 aa13.84□□□□□ -0.19
AP1S3-201ENST00000334271 NCKAP5LQ9HCH0 1330 aa13.83□□□□□ -0.19
AP1S3-201ENST00000334271 USP31Q70CQ4 1352 aa13.83□□□□□ -0.2
AP1S3-201ENST00000334271 STRCQ7RTU9 1775 aa13.83□□□□□ -0.2
AP1S3-201ENST00000334271 PNPLA6Q8IY17 1366 aa13.83□□□□□ -0.2
AP1S3-201ENST00000334271 DMRT2Q9Y5R5 561 aa13.82□□□□□ -0.2
AP1S3-201ENST00000334271 SHPRHQ149N8 1683 aa13.82□□□□□ -0.2
AP1S3-201ENST00000334271 PNNQ9H307 717 aaKnown RBP13.81□□□□□ -0.2
AP1S3-201ENST00000334271 C1orf115Q9H7X2 142 aa13.81□□□□□ -0.2
AP1S3-201ENST00000334271 ACEP12821 1306 aa13.81□□□□□ -0.2
AP1S3-201ENST00000334271 KIF24Q5T7B8 1368 aa13.8□□□□□ -0.2
AP1S3-201ENST00000334271 NCLP19338 710 aaKnown RBP13.8□□□□□ -0.2
AP1S3-201ENST00000334271 CERS3Q8IU89 383 aa13.8□□□□□ -0.2
AP1S3-201ENST00000334271 SENP3Q9H4L4 574 aaPredicted RBP13.8□□□□□ -0.2
AP1S3-201ENST00000334271 CDK12Q9NYV4 1490 aaPredicted RBP13.8□□□□□ -0.2
AP1S3-201ENST00000334271 CWC22Q9HCG8 908 aaKnown RBP13.8□□□□□ -0.2
AP1S3-201ENST00000334271 C19orf44Q9H6X5 657 aa13.79□□□□□ -0.2
AP1S3-201ENST00000334271 OVOS2A0A0J9YW53 1432 aa13.79□□□□□ -0.2
AP1S3-201ENST00000334271 MST1RQ04912 1400 aa13.79□□□□□ -0.2
AP1S3-201ENST00000334271 OVOS2Q6IE36 1432 aa13.79□□□□□ -0.2
AP1S3-201ENST00000334271 TTC21BQ7Z4L5 1316 aa13.79□□□□□ -0.2
AP1S3-201ENST00000334271 RGPD8O14715 1765 aaPredicted RBP13.79□□□□□ -0.2
AP1S3-201ENST00000334271 COG3Q96JB2 828 aa13.79□□□□□ -0.2
AP1S3-201ENST00000334271 NUDCQ9Y266 331 aa13.79□□□□□ -0.2
AP1S3-201ENST00000334271 COL3A1P02461 1466 aaPredicted RBP13.78□□□□□ -0.2
AP1S3-201ENST00000334271 MTHFSP49914 203 aa13.76□□□□□ -0.21
AP1S3-201ENST00000334271 PROSER2Q86WR7 435 aaPredicted RBP13.76□□□□□ -0.21
AP1S3-201ENST00000334271 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.76□□□□□ -0.21
AP1S3-201ENST00000334271 STRCP1A6NGW2 1772 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms