RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 EXOSC9Q06265 439 aaKnown RBP24.39■■□□□ 1.5
RFTN1-201ENST00000334133 CCDC27Q2M243 656 aa24.39■■□□□ 1.49
RFTN1-201ENST00000334133 FAM161AQ3B820 660 aa24.39■■□□□ 1.49
RFTN1-201ENST00000334133 DIAPH1O60610 1272 aaKnown RBP24.39■■□□□ 1.49
RFTN1-201ENST00000334133 TRIM35Q9UPQ4 493 aa24.39■■□□□ 1.49
RFTN1-201ENST00000334133 RIPK4P57078 832 aa24.38■■□□□ 1.49
RFTN1-201ENST00000334133 PCDHB15Q9Y5E8 787 aa24.38■■□□□ 1.49
RFTN1-201ENST00000334133 NINLQ9Y2I6 1382 aa24.38■■□□□ 1.49
RFTN1-201ENST00000334133 ARHGEF40Q8TER5 1519 aa24.37■■□□□ 1.49
RFTN1-201ENST00000334133 HMOX1P09601 288 aa24.36■■□□□ 1.49
RFTN1-201ENST00000334133 NLRP1Q9C000 1473 aa24.36■■□□□ 1.49
RFTN1-201ENST00000334133 METP08581 1390 aa24.35■■□□□ 1.49
RFTN1-201ENST00000334133 NUTM2FA1L443 756 aa24.34■■□□□ 1.49
RFTN1-201ENST00000334133 NME9Q86XW9 330 aa24.34■■□□□ 1.49
RFTN1-201ENST00000334133 SMC4Q9NTJ3 1288 aa24.33■■□□□ 1.49
RFTN1-201ENST00000334133 EMILIN1Q9Y6C2 1016 aa24.33■■□□□ 1.49
RFTN1-201ENST00000334133 POLKQ9UBT6 870 aa24.33■■□□□ 1.48
RFTN1-201ENST00000334133 COL3A1P02461 1466 aaPredicted RBP24.32■■□□□ 1.48
RFTN1-201ENST00000334133 DEKP35659 375 aaKnown RBP24.31■■□□□ 1.48
RFTN1-201ENST00000334133 PRKAR2BP31323 418 aa24.31■■□□□ 1.48
RFTN1-201ENST00000334133 THUMPD2Q9BTF0 503 aaKnown RBP24.31■■□□□ 1.48
RFTN1-201ENST00000334133 ZMYM3Q14202 1370 aa24.31■■□□□ 1.48
RFTN1-201ENST00000334133 FTSJ3Q8IY81 847 aaKnown RBP24.3■■□□□ 1.48
RFTN1-201ENST00000334133 SSH1Q8WYL5 1049 aa24.3■■□□□ 1.48
RFTN1-201ENST00000334133 WASLO00401 505 aaPredicted RBP24.28■■□□□ 1.48
RFTN1-201ENST00000334133 RTL5Q5HYW3 569 aaPredicted RBP24.28■■□□□ 1.48
RFTN1-201ENST00000334133 PHACTR3Q96KR7 559 aa24.28■■□□□ 1.48
RFTN1-201ENST00000334133 PPP6R1Q9UPN7 881 aa24.28■■□□□ 1.48
RFTN1-201ENST00000334133 ZKSCAN2Q63HK3 967 aa24.27■■□□□ 1.48
RFTN1-201ENST00000334133 RRS1Q15050 365 aaKnown RBP24.27■■□□□ 1.48
RFTN1-201ENST00000334133 AGLP35573 1532 aa24.27■■□□□ 1.48
RFTN1-201ENST00000334133 ADGRB2O60241 1585 aa24.27■■□□□ 1.48
RFTN1-201ENST00000334133 SPATA31D1Q6ZQQ2 1576 aa24.26■■□□□ 1.47
RFTN1-201ENST00000334133 SEC24BO95487 1268 aa24.26■■□□□ 1.47
RFTN1-201ENST00000334133 DZIP1LQ8IYY4 767 aaKnown RBP24.26■■□□□ 1.47
RFTN1-201ENST00000334133 NUDT16Q96DE0 195 aaKnown RBP24.26■■□□□ 1.47
RFTN1-201ENST00000334133 PPIP5K1Q6PFW1 1433 aa24.25■■□□□ 1.47
RFTN1-201ENST00000334133 TRIM27P14373 513 aa24.24■■□□□ 1.47
RFTN1-201ENST00000334133 CEBPAP49715 358 aaPredicted RBP24.24■■□□□ 1.47
RFTN1-201ENST00000334133 MVPQ14764 893 aaKnown RBP24.24■■□□□ 1.47
RFTN1-201ENST00000334133 NOB1Q9ULX3 412 aaKnown RBP24.24■■□□□ 1.47
RFTN1-201ENST00000334133 NEFMP07197 916 aa24.24■■□□□ 1.47
RFTN1-201ENST00000334133 ITPRIPQ8IWB1 547 aa24.24■■□□□ 1.47
RFTN1-201ENST00000334133 DDRGK1Q96HY6 314 aa24.23■■□□□ 1.47
RFTN1-201ENST00000334133 PDZRN3Q9UPQ7 1066 aa24.23■■□□□ 1.47
RFTN1-201ENST00000334133 ELL2O00472 640 aaPredicted RBP24.22■■□□□ 1.47
RFTN1-201ENST00000334133 RSPH6AQ9H0K4 717 aa24.22■■□□□ 1.47
RFTN1-201ENST00000334133 DAXXQ9UER7 740 aaPredicted RBP24.22■■□□□ 1.47
RFTN1-201ENST00000334133 PNPLA6Q8IY17 1366 aa24.22■■□□□ 1.47
RFTN1-201ENST00000334133 PMFBP1Q8TBY8 1022 aa24.21■■□□□ 1.47
RFTN1-201ENST00000334133 MED14O60244 1454 aa24.21■■□□□ 1.47
RFTN1-201ENST00000334133 ANKRD26Q9UPS8 1709 aa24.2■■□□□ 1.47
RFTN1-201ENST00000334133 SOX12O15370 315 aa24.2■■□□□ 1.46
RFTN1-201ENST00000334133 FCHSD2O94868 740 aa24.2■■□□□ 1.46
RFTN1-201ENST00000334133 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.2■■□□□ 1.46
RFTN1-201ENST00000334133 REREQ9P2R6 1566 aa24.2■■□□□ 1.46
RFTN1-201ENST00000334133 KIF20BQ96Q89 1820 aa24.19■■□□□ 1.46
RFTN1-201ENST00000334133 SLC26A8Q96RN1 970 aa24.18■■□□□ 1.46
RFTN1-201ENST00000334133 SETD1AO15047 1707 aaKnown RBP24.18■■□□□ 1.46
RFTN1-201ENST00000334133 LRRC7Q96NW7 1537 aa24.18■■□□□ 1.46
RFTN1-201ENST00000334133 CCDC61Q9Y6R9 512 aa24.18■■□□□ 1.46
RFTN1-201ENST00000334133 MAP2P11137 1827 aaKnown RBP24.17■■□□□ 1.46
RFTN1-201ENST00000334133 NRXN3Q9Y4C0 1643 aa24.17■■□□□ 1.46
RFTN1-201ENST00000334133 ATF7IPQ6VMQ6 1270 aa24.17■■□□□ 1.46
RFTN1-201ENST00000334133 TMEM57Q8N5G2 664 aa24.17■■□□□ 1.46
RFTN1-201ENST00000334133 RWDD1Q9H446 243 aaPredicted RBP24.17■■□□□ 1.46
RFTN1-201ENST00000334133 PRR36Q9H6K5 1346 aa24.17■■□□□ 1.46
RFTN1-201ENST00000334133 COG3Q96JB2 828 aa24.16■■□□□ 1.46
RFTN1-201ENST00000334133 TNRQ92752 1358 aa24.16■■□□□ 1.46
RFTN1-201ENST00000334133 ATP7BP35670 1465 aa24.15■■□□□ 1.46
RFTN1-201ENST00000334133 DLC1Q96QB1 1528 aa24.15■■□□□ 1.46
RFTN1-201ENST00000334133 PNNQ9H307 717 aaKnown RBP24.15■■□□□ 1.46
RFTN1-201ENST00000334133 NCBP3Q53F19 620 aaKnown RBP24.15■■□□□ 1.46
RFTN1-201ENST00000334133 FAM83GA6ND36 823 aa24.14■■□□□ 1.46
RFTN1-201ENST00000334133 LTKP29376 864 aa24.14■■□□□ 1.46
RFTN1-201ENST00000334133 IL13P35225 146 aa24.14■■□□□ 1.45
RFTN1-201ENST00000334133 DCTN1Q14203 1278 aa24.14■■□□□ 1.45
RFTN1-201ENST00000334133 TSPYL6Q8N831 410 aa24.14■■□□□ 1.45
RFTN1-201ENST00000334133 CPS1P31327 1500 aa24.14■■□□□ 1.45
RFTN1-201ENST00000334133 CPSF1Q10570 1443 aaKnown RBP24.13■■□□□ 1.45
RFTN1-201ENST00000334133 ROBO2Q9HCK4 1378 aa24.13■■□□□ 1.45
RFTN1-201ENST00000334133 KIF13AQ9H1H9 1805 aa24.12■■□□□ 1.45
RFTN1-201ENST00000334133 USP19O94966 1318 aa24.12■■□□□ 1.45
RFTN1-201ENST00000334133 NFE2L2Q16236 605 aa24.12■■□□□ 1.45
RFTN1-201ENST00000334133 EDC4Q6P2E9 1401 aaKnown RBP24.12■■□□□ 1.45
RFTN1-201ENST00000334133 IL16Q14005 1332 aa24.11■■□□□ 1.45
RFTN1-201ENST00000334133 CT47B1P0C2W7 299 aaPredicted RBP24.11■■□□□ 1.45
RFTN1-201ENST00000334133 FAM135BQ49AJ0 1406 aa24.11■■□□□ 1.45
RFTN1-201ENST00000334133 HDGFP51858 240 aaKnown RBP24.1■■□□□ 1.45
RFTN1-201ENST00000334133 TMEM2Q9UHN6 1383 aa24.09■■□□□ 1.45
RFTN1-201ENST00000334133 AEBP1Q8IUX7 1158 aa24.09■■□□□ 1.45
RFTN1-201ENST00000334133 BCL11AQ9H165 835 aa24.09■■□□□ 1.45
RFTN1-201ENST00000334133 DDX19BQ9UMR2 479 aa24.08■■□□□ 1.45
RFTN1-201ENST00000334133 AAMPQ13685 434 aa24.06■■□□□ 1.44
RFTN1-201ENST00000334133 C1orf115Q9H7X2 142 aa24.06■■□□□ 1.44
RFTN1-201ENST00000334133 MBIPQ9NS73 344 aa24.06■■□□□ 1.44
RFTN1-201ENST00000334133 ACEP12821 1306 aa24.05■■□□□ 1.44
RFTN1-201ENST00000334133 KIF16BQ96L93 1317 aa24.03■■□□□ 1.44
RFTN1-201ENST00000334133 IPO8O15397 1037 aaKnown RBP24.03■■□□□ 1.44
RFTN1-201ENST00000334133 VAMP4O75379 141 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms