RNA–Protein interactions for RNA: ENST00000333149.6

TRIM50-201, Transcript of tripartite motif containing 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM50, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-201ENST00000333149 IDI1Q13907 227 aa22.89■■□□□ 1.26
TRIM50-201ENST00000333149 FBXO31Q5XUX0 539 aaPredicted RBP22.89■■□□□ 1.26
TRIM50-201ENST00000333149 IL27Q8NEV9 243 aa22.89■■□□□ 1.26
TRIM50-201ENST00000333149 IL16Q14005 1332 aa22.89■■□□□ 1.25
TRIM50-201ENST00000333149 ANKRD26Q9UPS8 1709 aa22.89■■□□□ 1.25
TRIM50-201ENST00000333149 BCL2L13Q9BXK5 485 aa22.89■■□□□ 1.25
TRIM50-201ENST00000333149 PREX1Q8TCU6 1659 aa22.88■■□□□ 1.25
TRIM50-201ENST00000333149 ATAD2Q6PL18 1390 aa22.87■■□□□ 1.25
TRIM50-201ENST00000333149 TMPOP42166 694 aaKnown RBP22.87■■□□□ 1.25
TRIM50-201ENST00000333149 DZIP1LQ8IYY4 767 aaKnown RBP22.87■■□□□ 1.25
TRIM50-201ENST00000333149 TBC1D32Q96NH3 1257 aa22.87■■□□□ 1.25
TRIM50-201ENST00000333149 PTPRMP28827 1452 aa22.86■■□□□ 1.25
TRIM50-201ENST00000333149 NUTM2DQ5VT03 806 aaPredicted RBP22.86■■□□□ 1.25
TRIM50-201ENST00000333149 TRIM35Q9UPQ4 493 aa22.86■■□□□ 1.25
TRIM50-201ENST00000333149 UPF2Q9HAU5 1272 aaKnown RBP22.84■■□□□ 1.25
TRIM50-201ENST00000333149 CD163L1Q9NR16 1453 aa22.84■■□□□ 1.25
TRIM50-201ENST00000333149 HDAC1Q13547 482 aaPredicted RBP22.84■■□□□ 1.25
TRIM50-201ENST00000333149 PNPLA6Q8IY17 1366 aa22.83■■□□□ 1.25
TRIM50-201ENST00000333149 TMEM131LA2VDJ0 1609 aa22.83■■□□□ 1.25
TRIM50-201ENST00000333149 FYB1O15117 783 aa22.83■■□□□ 1.25
TRIM50-201ENST00000333149 TERF2IPQ9NYB0 399 aa22.83■■□□□ 1.25
TRIM50-201ENST00000333149 EXOSC9Q06265 439 aaKnown RBP22.82■■□□□ 1.24
TRIM50-201ENST00000333149 SRPK2P78362 688 aaKnown RBP22.81■■□□□ 1.24
TRIM50-201ENST00000333149 FTSJ3Q8IY81 847 aaKnown RBP22.81■■□□□ 1.24
TRIM50-201ENST00000333149 ANTXR1Q9H6X2 564 aa22.81■■□□□ 1.24
TRIM50-201ENST00000333149 TSR2Q969E8 191 aaKnown RBP22.81■■□□□ 1.24
TRIM50-201ENST00000333149 GGNBP2Q9H3C7 697 aa22.81■■□□□ 1.24
TRIM50-201ENST00000333149 PNNQ9H307 717 aaKnown RBP22.8■■□□□ 1.24
TRIM50-201ENST00000333149 DDX19BQ9UMR2 479 aa22.8■■□□□ 1.24
TRIM50-201ENST00000333149 MYO5BQ9ULV0 1848 aa22.79■■□□□ 1.24
TRIM50-201ENST00000333149 TRIM27P14373 513 aa22.79■■□□□ 1.24
TRIM50-201ENST00000333149 SSH1Q8WYL5 1049 aa22.79■■□□□ 1.24
TRIM50-201ENST00000333149 SMC4Q9NTJ3 1288 aa22.79■■□□□ 1.24
TRIM50-201ENST00000333149 YTHDC2Q9H6S0 1430 aaKnown RBP22.79■■□□□ 1.24
TRIM50-201ENST00000333149 ATF7IPQ6VMQ6 1270 aa22.79■■□□□ 1.24
TRIM50-201ENST00000333149 SPATA31D1Q6ZQQ2 1576 aa22.78■■□□□ 1.24
TRIM50-201ENST00000333149 U2SURPO15042 1029 aaKnown RBP22.78■■□□□ 1.24
TRIM50-201ENST00000333149 SAFB2Q14151 953 aaKnown RBP eCLIP22.77■■□□□ 1.24
TRIM50-201ENST00000333149 CDC42BPGQ6DT37 1551 aa22.77■■□□□ 1.24
TRIM50-201ENST00000333149 STK26Q9P289 416 aa22.77■■□□□ 1.24
TRIM50-201ENST00000333149 SMC5Q8IY18 1101 aa22.76■■□□□ 1.23
TRIM50-201ENST00000333149 DIAPH1O60610 1272 aaKnown RBP22.75■■□□□ 1.23
TRIM50-201ENST00000333149 PRAM1Q96QH2 718 aa22.75■■□□□ 1.23
TRIM50-201ENST00000333149 TBC1D2Q9BYX2 928 aa22.75■■□□□ 1.23
TRIM50-201ENST00000333149 RIPK4P57078 832 aa22.74■■□□□ 1.23
TRIM50-201ENST00000333149 BRPF3Q9ULD4 1205 aa22.74■■□□□ 1.23
TRIM50-201ENST00000333149 FCHSD2O94868 740 aa22.73■■□□□ 1.23
TRIM50-201ENST00000333149 ALDH1L2Q3SY69 923 aa22.73■■□□□ 1.23
TRIM50-201ENST00000333149 HDGFL2Q7Z4V5 671 aaPredicted RBP22.73■■□□□ 1.23
TRIM50-201ENST00000333149 MINK1Q8N4C8 1332 aaPredicted RBP22.73■■□□□ 1.23
TRIM50-201ENST00000333149 BRPF1P55201 1214 aaPredicted RBP22.72■■□□□ 1.23
TRIM50-201ENST00000333149 ZBTB40Q9NUA8 1239 aa22.72■■□□□ 1.23
TRIM50-201ENST00000333149 NOB1Q9ULX3 412 aaKnown RBP22.72■■□□□ 1.23
TRIM50-201ENST00000333149 KIF16BQ96L93 1317 aa22.72■■□□□ 1.23
TRIM50-201ENST00000333149 ALKQ9UM73 1620 aa22.72■■□□□ 1.23
TRIM50-201ENST00000333149 IPO8O15397 1037 aaKnown RBP22.72■■□□□ 1.23
TRIM50-201ENST00000333149 ZNF428Q96B54 188 aa22.72■■□□□ 1.23
TRIM50-201ENST00000333149 POGKQ9P215 609 aa22.72■■□□□ 1.23
TRIM50-201ENST00000333149 KIF20BQ96Q89 1820 aa22.71■■□□□ 1.23
TRIM50-201ENST00000333149 PPIP5K1Q6PFW1 1433 aa22.7■■□□□ 1.22
TRIM50-201ENST00000333149 ITPRIPQ8IWB1 547 aa22.7■■□□□ 1.22
TRIM50-201ENST00000333149 CDK19Q9BWU1 502 aa22.69■■□□□ 1.22
TRIM50-201ENST00000333149 STAG3Q9UJ98 1225 aa22.69■■□□□ 1.22
TRIM50-201ENST00000333149 CEBPAP49715 358 aaPredicted RBP22.69■■□□□ 1.22
TRIM50-201ENST00000333149 TMEM57Q8N5G2 664 aa22.69■■□□□ 1.22
TRIM50-201ENST00000333149 SLKQ9H2G2 1235 aaPredicted RBP22.69■■□□□ 1.22
TRIM50-201ENST00000333149 FER1L4A9Z1Z3 1794 aa22.68■■□□□ 1.22
TRIM50-201ENST00000333149 DLC1Q96QB1 1528 aa22.68■■□□□ 1.22
TRIM50-201ENST00000333149 TNRQ92752 1358 aa22.67■■□□□ 1.22
TRIM50-201ENST00000333149 FAM135BQ49AJ0 1406 aa22.67■■□□□ 1.22
TRIM50-201ENST00000333149 C22orf23Q9BZE7 217 aa22.67■■□□□ 1.22
TRIM50-201ENST00000333149 CABP1Q9NZU7 370 aa22.65■■□□□ 1.22
TRIM50-201ENST00000333149 ATP7BP35670 1465 aa22.65■■□□□ 1.22
TRIM50-201ENST00000333149 RSPH6AQ9H0K4 717 aa22.65■■□□□ 1.22
TRIM50-201ENST00000333149 LRRC7Q96NW7 1537 aa22.65■■□□□ 1.22
TRIM50-201ENST00000333149 NUCB1Q02818 461 aa22.64■■□□□ 1.21
TRIM50-201ENST00000333149 RTN4Q9NQC3 1192 aaKnown RBP22.64■■□□□ 1.21
TRIM50-201ENST00000333149 C3P01024 1663 aa22.63■■□□□ 1.21
TRIM50-201ENST00000333149 A2ML1A8K2U0 1454 aa22.63■■□□□ 1.21
TRIM50-201ENST00000333149 POLKQ9UBT6 870 aa22.63■■□□□ 1.21
TRIM50-201ENST00000333149 ARHGAP45Q92619 1136 aa22.62■■□□□ 1.21
TRIM50-201ENST00000333149 PIK3R4Q99570 1358 aa22.61■■□□□ 1.21
TRIM50-201ENST00000333149 PRKAR2BP31323 418 aa22.59■■□□□ 1.21
TRIM50-201ENST00000333149 PLPPR3Q6T4P5 718 aa22.59■■□□□ 1.21
TRIM50-201ENST00000333149 CHMP4BQ9H444 224 aaKnown RBP22.59■■□□□ 1.21
TRIM50-201ENST00000333149 RBM25P49756 843 aaKnown RBP22.58■■□□□ 1.21
TRIM50-201ENST00000333149 MFAP1P55081 439 aaKnown RBP22.58■■□□□ 1.21
TRIM50-201ENST00000333149 CALD1Q05682 793 aaKnown RBP22.58■■□□□ 1.21
TRIM50-201ENST00000333149 NFE2L2Q16236 605 aa22.58■■□□□ 1.21
TRIM50-201ENST00000333149 CHMP5Q9NZZ3 219 aa22.58■■□□□ 1.2
TRIM50-201ENST00000333149 VAMP4O75379 141 aa22.57■■□□□ 1.2
TRIM50-201ENST00000333149 SETD1AO15047 1707 aaKnown RBP22.57■■□□□ 1.2
TRIM50-201ENST00000333149 PTCH1Q13635 1447 aa22.57■■□□□ 1.2
TRIM50-201ENST00000333149 ZBTB7BO15156 539 aaPredicted RBP22.57■■□□□ 1.2
TRIM50-201ENST00000333149 CPSF1Q10570 1443 aaKnown RBP22.56■■□□□ 1.2
TRIM50-201ENST00000333149 MAP2P11137 1827 aaKnown RBP22.56■■□□□ 1.2
TRIM50-201ENST00000333149 CHD1LQ86WJ1 897 aa22.56■■□□□ 1.2
TRIM50-201ENST00000333149 ADAMTSL3P82987 1691 aa22.55■■□□□ 1.2
TRIM50-201ENST00000333149 ZNF853P0CG23 659 aa22.55■■□□□ 1.2
TRIM50-201ENST00000333149 MCM4P33991 863 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms