RNA–Protein interactions for RNA: ENST00000332859.10

SUMO3-201, Transcript of small ubiquitin-like modifier 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO3, Length 1,807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-201ENST00000332859 ERICH6BQ5W0A0 696 aa26.77■■□□□ 1.88
SUMO3-201ENST00000332859 C14orf37Q86TY3 774 aa26.76■■□□□ 1.87
SUMO3-201ENST00000332859 PROSER2Q86WR7 435 aaPredicted RBP26.76■■□□□ 1.87
SUMO3-201ENST00000332859 RBM33Q96EV2 1170 aaKnown RBP26.76■■□□□ 1.87
SUMO3-201ENST00000332859 NME9Q86XW9 330 aa26.75■■□□□ 1.87
SUMO3-201ENST00000332859 TTC21BQ7Z4L5 1316 aa26.74■■□□□ 1.87
SUMO3-201ENST00000332859 NGDNQ8NEJ9 315 aaKnown RBP26.74■■□□□ 1.87
SUMO3-201ENST00000332859 PMFBP1Q8TBY8 1022 aa26.74■■□□□ 1.87
SUMO3-201ENST00000332859 STRCQ7RTU9 1775 aa26.73■■□□□ 1.87
SUMO3-201ENST00000332859 SHPRHQ149N8 1683 aa26.73■■□□□ 1.87
SUMO3-201ENST00000332859 SSH2Q76I76 1423 aa26.72■■□□□ 1.87
SUMO3-201ENST00000332859 COG3Q96JB2 828 aa26.72■■□□□ 1.87
SUMO3-201ENST00000332859 TTC21AQ8NDW8 1320 aa26.7■■□□□ 1.87
SUMO3-201ENST00000332859 STRCP1A6NGW2 1772 aa26.69■■□□□ 1.86
SUMO3-201ENST00000332859 NCOA3Q9Y6Q9 1424 aa26.69■■□□□ 1.86
SUMO3-201ENST00000332859 NUDCQ9Y266 331 aa26.67■■□□□ 1.86
SUMO3-201ENST00000332859 AATKQ6ZMQ8 1374 aa26.67■■□□□ 1.86
SUMO3-201ENST00000332859 ZRANB1Q9UGI0 708 aa26.67■■□□□ 1.86
SUMO3-201ENST00000332859 PHF8Q9UPP1 1060 aa26.66■■□□□ 1.86
SUMO3-201ENST00000332859 COL3A1P02461 1466 aaPredicted RBP26.66■■□□□ 1.86
SUMO3-201ENST00000332859 OVOS2A0A0J9YW53 1432 aa26.65■■□□□ 1.86
SUMO3-201ENST00000332859 OVOS2Q6IE36 1432 aa26.65■■□□□ 1.86
SUMO3-201ENST00000332859 C19orf44Q9H6X5 657 aa26.65■■□□□ 1.86
SUMO3-201ENST00000332859 SENP3-EIF4A1A0A087X0R7 540 aa26.64■■□□□ 1.85
SUMO3-201ENST00000332859 TMEM94Q12767 1356 aa26.64■■□□□ 1.85
SUMO3-201ENST00000332859 PNPLA6Q8IY17 1366 aa26.63■■□□□ 1.85
SUMO3-201ENST00000332859 POLKQ9UBT6 870 aa26.62■■□□□ 1.85
SUMO3-201ENST00000332859 DCCP43146 1447 aa26.61■■□□□ 1.85
SUMO3-201ENST00000332859 ESCO1Q5FWF5 840 aa26.6■■□□□ 1.85
SUMO3-201ENST00000332859 MAP2P11137 1827 aaKnown RBP26.6■■□□□ 1.85
SUMO3-201ENST00000332859 USP31Q70CQ4 1352 aa26.59■■□□□ 1.85
SUMO3-201ENST00000332859 CDK12Q9NYV4 1490 aaPredicted RBP26.58■■□□□ 1.85
SUMO3-201ENST00000332859 PDE3BQ13370 1112 aa26.58■■□□□ 1.85
SUMO3-201ENST00000332859 CCDC146Q8IYE0 955 aa26.58■■□□□ 1.85
SUMO3-201ENST00000332859 SALL2Q9Y467 1007 aaPredicted RBP26.58■■□□□ 1.85
SUMO3-201ENST00000332859 PIK3C2AO00443 1686 aa26.58■■□□□ 1.85
SUMO3-201ENST00000332859 DIAPH1O60610 1272 aaKnown RBP26.56■■□□□ 1.84
SUMO3-201ENST00000332859 C1orf167Q5SNV9 1468 aa26.56■■□□□ 1.84
SUMO3-201ENST00000332859 ATF3P18847 181 aa26.55■■□□□ 1.84
SUMO3-201ENST00000332859 FBLN1P23142 703 aa26.55■■□□□ 1.84
SUMO3-201ENST00000332859 KIF1AQ12756 1690 aa26.55■■□□□ 1.84
SUMO3-201ENST00000332859 PPM1GO15355 546 aaPredicted RBP26.55■■□□□ 1.84
SUMO3-201ENST00000332859 EMILIN1Q9Y6C2 1016 aa26.55■■□□□ 1.84
SUMO3-201ENST00000332859 USP54Q70EL1 1684 aa26.55■■□□□ 1.84
SUMO3-201ENST00000332859 RNF123Q5XPI4 1314 aa26.54■■□□□ 1.84
SUMO3-201ENST00000332859 U2AF1L5P0DN76 240 aaPredicted RBP26.54■■□□□ 1.84
SUMO3-201ENST00000332859 U2AF1Q01081 240 aaKnown RBP eCLIP26.54■■□□□ 1.84
SUMO3-201ENST00000332859 NGEFQ8N5V2 710 aa26.54■■□□□ 1.84
SUMO3-201ENST00000332859 RUNDC1Q96C34 613 aa26.54■■□□□ 1.84
SUMO3-201ENST00000332859 PPP4R2Q9NY27 417 aa26.53■■□□□ 1.84
SUMO3-201ENST00000332859 LRRC7Q96NW7 1537 aa26.52■■□□□ 1.84
SUMO3-201ENST00000332859 MSH6P52701 1360 aa26.52■■□□□ 1.84
SUMO3-201ENST00000332859 IRX6P78412 446 aaPredicted RBP26.52■■□□□ 1.84
SUMO3-201ENST00000332859 ORAI2Q96SN7 254 aa26.52■■□□□ 1.84
SUMO3-201ENST00000332859 MST1RQ04912 1400 aa26.52■■□□□ 1.84
SUMO3-201ENST00000332859 APAF1O14727 1248 aa26.51■■□□□ 1.83
SUMO3-201ENST00000332859 U2SURPO15042 1029 aaKnown RBP26.51■■□□□ 1.83
SUMO3-201ENST00000332859 PSME1Q06323 249 aa26.51■■□□□ 1.83
SUMO3-201ENST00000332859 DMRT2Q9Y5R5 561 aa26.51■■□□□ 1.83
SUMO3-201ENST00000332859 RRS1Q15050 365 aaKnown RBP26.51■■□□□ 1.83
SUMO3-201ENST00000332859 CADPS2Q86UW7 1296 aa26.51■■□□□ 1.83
SUMO3-201ENST00000332859 PAK3O75914 559 aaPredicted RBP26.5■■□□□ 1.83
SUMO3-201ENST00000332859 XIRP1Q702N8 1843 aaKnown RBP26.49■■□□□ 1.83
SUMO3-201ENST00000332859 ZNF335Q9H4Z2 1342 aaPredicted RBP26.49■■□□□ 1.83
SUMO3-201ENST00000332859 NLRP6P59044 892 aa26.49■■□□□ 1.83
SUMO3-201ENST00000332859 TSHZ2Q9NRE2 1034 aa26.49■■□□□ 1.83
SUMO3-201ENST00000332859 IQSEC2Q5JU85 1478 aa26.48■■□□□ 1.83
SUMO3-201ENST00000332859 ABTB2Q8N961 1025 aa26.48■■□□□ 1.83
SUMO3-201ENST00000332859 MARF1Q9Y4F3 1742 aaKnown RBP26.46■■□□□ 1.83
SUMO3-201ENST00000332859 ZNF521Q96K83 1311 aa26.46■■□□□ 1.83
SUMO3-201ENST00000332859 PNNQ9H307 717 aaKnown RBP26.45■■□□□ 1.82
SUMO3-201ENST00000332859 FOXO3O43524 673 aa26.44■■□□□ 1.82
SUMO3-201ENST00000332859 IL13P35225 146 aa26.44■■□□□ 1.82
SUMO3-201ENST00000332859 TCP11L2Q8N4U5 519 aa26.42■■□□□ 1.82
SUMO3-201ENST00000332859 PEAK1Q9H792 1746 aa26.42■■□□□ 1.82
SUMO3-201ENST00000332859 SOX12O15370 315 aa26.42■■□□□ 1.82
SUMO3-201ENST00000332859 NCBP3Q53F19 620 aaKnown RBP26.42■■□□□ 1.82
SUMO3-201ENST00000332859 NUTM2GQ5VZR2 741 aa26.41■■□□□ 1.82
SUMO3-201ENST00000332859 CDCA7LQ96GN5 454 aa26.41■■□□□ 1.82
SUMO3-201ENST00000332859 SBNO1A3KN83 1393 aa26.41■■□□□ 1.82
SUMO3-201ENST00000332859 TRPM3Q9HCF6 1732 aaPredicted RBP26.4■■□□□ 1.82
SUMO3-201ENST00000332859 GOLGA2Q08379 1002 aa26.4■■□□□ 1.82
SUMO3-201ENST00000332859 PLEKHF1Q96S99 279 aa26.4■■□□□ 1.82
SUMO3-201ENST00000332859 MAP3K19Q56UN5 1328 aa26.4■■□□□ 1.82
SUMO3-201ENST00000332859 FCHSD2O94868 740 aa26.39■■□□□ 1.82
SUMO3-201ENST00000332859 MAPK8IP3Q9UPT6 1336 aa26.39■■□□□ 1.82
SUMO3-201ENST00000332859 KRT28Q7Z3Y7 464 aa26.39■■□□□ 1.81
SUMO3-201ENST00000332859 FLT4P35916 1363 aa26.39■■□□□ 1.81
SUMO3-201ENST00000332859 KIF24Q5T7B8 1368 aa26.38■■□□□ 1.81
SUMO3-201ENST00000332859 XPCQ01831 940 aaPredicted RBP26.36■■□□□ 1.81
SUMO3-201ENST00000332859 CCDC27Q2M243 656 aa26.35■■□□□ 1.81
SUMO3-201ENST00000332859 RSPH6AQ9H0K4 717 aa26.35■■□□□ 1.81
SUMO3-201ENST00000332859 AMPHP49418 695 aa26.35■■□□□ 1.81
SUMO3-201ENST00000332859 EIF4A2Q14240 407 aaKnown RBP26.35■■□□□ 1.81
SUMO3-201ENST00000332859 RRP7AQ9Y3A4 280 aaKnown RBP26.35■■□□□ 1.81
SUMO3-201ENST00000332859 NEFMP07197 916 aa26.34■■□□□ 1.81
SUMO3-201ENST00000332859 WWC1Q8IX03 1113 aa26.34■■□□□ 1.81
SUMO3-201ENST00000332859 NPHP3Q7Z494 1330 aa26.33■■□□□ 1.81
SUMO3-201ENST00000332859 NEUROD2Q15784 382 aa26.33■■□□□ 1.81
SUMO3-201ENST00000332859 HSP90AB2PQ58FF8 381 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms