RNA–Protein interactions for RNA: ENST00000332118.10

SRPRA-201, Transcript of SRP receptor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPRA, Length 3,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-201ENST00000332118 LTKP29376 864 aa17.96■□□□□ 0.47
SRPRA-201ENST00000332118 B4GALNT3Q6L9W6 998 aa17.96■□□□□ 0.47
SRPRA-201ENST00000332118 TBX22Q9Y458 520 aa17.96■□□□□ 0.47
SRPRA-201ENST00000332118 RGPD1P0DJD0 1748 aa17.96■□□□□ 0.47
SRPRA-201ENST00000332118 CHD2O14647 1828 aaKnown RBP17.95■□□□□ 0.46
SRPRA-201ENST00000332118 SAFB2Q14151 953 aaKnown RBP eCLIP17.95■□□□□ 0.46
SRPRA-201ENST00000332118 CCDC146Q8IYE0 955 aa17.95■□□□□ 0.46
SRPRA-201ENST00000332118 SPINK5Q9NQ38 1064 aaPredicted RBP17.94■□□□□ 0.46
SRPRA-201ENST00000332118 OVOS2A0A0J9YW53 1432 aa17.93■□□□□ 0.46
SRPRA-201ENST00000332118 OVOS2Q6IE36 1432 aa17.93■□□□□ 0.46
SRPRA-201ENST00000332118 MARF1Q9Y4F3 1742 aaKnown RBP17.93■□□□□ 0.46
SRPRA-201ENST00000332118 SALL2Q9Y467 1007 aaPredicted RBP17.92■□□□□ 0.46
SRPRA-201ENST00000332118 CCDC61Q9Y6R9 512 aa17.92■□□□□ 0.46
SRPRA-201ENST00000332118 ANKARQ7Z5J8 1434 aa17.92■□□□□ 0.46
SRPRA-201ENST00000332118 PLEKHG3A1L390 1219 aa17.91■□□□□ 0.46
SRPRA-201ENST00000332118 RBM19Q9Y4C8 960 aaKnown RBP17.91■□□□□ 0.46
SRPRA-201ENST00000332118 PRR36Q9H6K5 1346 aa17.91■□□□□ 0.46
SRPRA-201ENST00000332118 EXOC6Q8TAG9 804 aa17.91■□□□□ 0.46
SRPRA-201ENST00000332118 ZNF692Q9BU19 519 aaPredicted RBP17.91■□□□□ 0.46
SRPRA-201ENST00000332118 TCP11L2Q8N4U5 519 aa17.9■□□□□ 0.46
SRPRA-201ENST00000332118 NUDT16Q96DE0 195 aaKnown RBP17.9■□□□□ 0.46
SRPRA-201ENST00000332118 GGNBP2Q9H3C7 697 aa17.9■□□□□ 0.46
SRPRA-201ENST00000332118 DMRT2Q9Y5R5 561 aa17.9■□□□□ 0.46
SRPRA-201ENST00000332118 IL16Q14005 1332 aa17.9■□□□□ 0.46
SRPRA-201ENST00000332118 CCDC136Q96JN2 1154 aa17.9■□□□□ 0.46
SRPRA-201ENST00000332118 TXNDC2Q86VQ3 553 aa17.89■□□□□ 0.45
SRPRA-201ENST00000332118 USP31Q70CQ4 1352 aa17.89■□□□□ 0.45
SRPRA-201ENST00000332118 USP6P35125 1406 aa17.89■□□□□ 0.45
SRPRA-201ENST00000332118 THEMISQ8N1K5 641 aaPredicted RBP17.88■□□□□ 0.45
SRPRA-201ENST00000332118 FANCIQ9NVI1 1328 aa17.88■□□□□ 0.45
SRPRA-201ENST00000332118 CT47B1P0C2W7 299 aaPredicted RBP17.87■□□□□ 0.45
SRPRA-201ENST00000332118 EID1Q9Y6B2 187 aa17.87■□□□□ 0.45
SRPRA-201ENST00000332118 NWD1Q149M9 1564 aa17.87■□□□□ 0.45
SRPRA-201ENST00000332118 PEAK1Q9H792 1746 aa17.87■□□□□ 0.45
SRPRA-201ENST00000332118 KDM2BQ8NHM5 1336 aa17.87■□□□□ 0.45
SRPRA-201ENST00000332118 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.87■□□□□ 0.45
SRPRA-201ENST00000332118 POLKQ9UBT6 870 aa17.86■□□□□ 0.45
SRPRA-201ENST00000332118 PNNQ9H307 717 aaKnown RBP17.86■□□□□ 0.45
SRPRA-201ENST00000332118 RGPD8O14715 1765 aaPredicted RBP17.86■□□□□ 0.45
SRPRA-201ENST00000332118 PIK3C2AO00443 1686 aa17.85■□□□□ 0.45
SRPRA-201ENST00000332118 TNNT2P45379 298 aaPredicted RBP17.84■□□□□ 0.45
SRPRA-201ENST00000332118 CEBPAP49715 358 aaPredicted RBP17.84■□□□□ 0.45
SRPRA-201ENST00000332118 FCHSD2O94868 740 aa17.84■□□□□ 0.45
SRPRA-201ENST00000332118 DIAPH1O60610 1272 aaKnown RBP17.83■□□□□ 0.44
SRPRA-201ENST00000332118 PDE3AQ14432 1141 aa17.83■□□□□ 0.44
SRPRA-201ENST00000332118 CRBNQ96SW2 442 aa17.83■□□□□ 0.44
SRPRA-201ENST00000332118 DLG5Q8TDM6 1919 aa17.83■□□□□ 0.44
SRPRA-201ENST00000332118 AAMPQ13685 434 aa17.82■□□□□ 0.44
SRPRA-201ENST00000332118 PHRF1Q9P1Y6 1649 aaKnown RBP17.82■□□□□ 0.44
SRPRA-201ENST00000332118 RSPH6AQ9H0K4 717 aa17.81■□□□□ 0.44
SRPRA-201ENST00000332118 TRIM35Q9UPQ4 493 aa17.81■□□□□ 0.44
SRPRA-201ENST00000332118 SETD1BQ9UPS6 1966 aaKnown RBP17.81■□□□□ 0.44
SRPRA-201ENST00000332118 U2AF1L5P0DN76 240 aaPredicted RBP17.8■□□□□ 0.44
SRPRA-201ENST00000332118 U2AF1Q01081 240 aaKnown RBP eCLIP17.8■□□□□ 0.445e-8■□□□□ 9.1
SRPRA-201ENST00000332118 IL13P35225 146 aa17.8■□□□□ 0.44
SRPRA-201ENST00000332118 TMPOP42166 694 aaKnown RBP17.8■□□□□ 0.44
SRPRA-201ENST00000332118 C20orf194Q5TEA3 1177 aa17.8■□□□□ 0.44
SRPRA-201ENST00000332118 PLIN1O60240 522 aa17.8■□□□□ 0.44
SRPRA-201ENST00000332118 TTC21AQ8NDW8 1320 aa17.79■□□□□ 0.44
SRPRA-201ENST00000332118 MYH16Q9H6N6 1097 aa17.79■□□□□ 0.44
SRPRA-201ENST00000332118 MS4A1P11836 297 aa17.78■□□□□ 0.44
SRPRA-201ENST00000332118 AMOTL2Q9Y2J4 779 aa17.78■□□□□ 0.44
SRPRA-201ENST00000332118 TTC21BQ7Z4L5 1316 aa17.78■□□□□ 0.44
SRPRA-201ENST00000332118 RARSP54136 660 aaKnown RBP17.78■□□□□ 0.44
SRPRA-201ENST00000332118 NME9Q86XW9 330 aa17.77■□□□□ 0.43
SRPRA-201ENST00000332118 TCERG1O14776 1098 aaKnown RBP17.76■□□□□ 0.43
SRPRA-201ENST00000332118 VIRMAQ69YN4 1812 aaKnown RBP17.76■□□□□ 0.43
SRPRA-201ENST00000332118 KIF24Q5T7B8 1368 aa17.76■□□□□ 0.43
SRPRA-201ENST00000332118 ACEP12821 1306 aa17.75■□□□□ 0.43
SRPRA-201ENST00000332118 COG3Q96JB2 828 aa17.75■□□□□ 0.43
SRPRA-201ENST00000332118 CENPQQ7L2Z9 268 aaPredicted RBP17.74■□□□□ 0.43
SRPRA-201ENST00000332118 SENP3Q9H4L4 574 aaPredicted RBP17.74■□□□□ 0.43
SRPRA-201ENST00000332118 BRPF1P55201 1214 aaPredicted RBP17.74■□□□□ 0.43
SRPRA-201ENST00000332118 BCAR3O75815 825 aa17.73■□□□□ 0.43
SRPRA-201ENST00000332118 NCKAP5LQ9HCH0 1330 aa17.73■□□□□ 0.43
SRPRA-201ENST00000332118 LRRC37A3O60309 1634 aa17.73■□□□□ 0.43
SRPRA-201ENST00000332118 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.73■□□□□ 0.43
SRPRA-201ENST00000332118 MAPK8IP3Q9UPT6 1336 aa17.72■□□□□ 0.43
SRPRA-201ENST00000332118 SLC26A8Q96RN1 970 aa17.71■□□□□ 0.43
SRPRA-201ENST00000332118 RRP7AQ9Y3A4 280 aaKnown RBP17.71■□□□□ 0.43
SRPRA-201ENST00000332118 ZNF428Q96B54 188 aa17.7■□□□□ 0.42
SRPRA-201ENST00000332118 EMILIN1Q9Y6C2 1016 aa17.7■□□□□ 0.42
SRPRA-201ENST00000332118 ADGRL3Q9HAR2 1447 aa17.7■□□□□ 0.42
SRPRA-201ENST00000332118 MST1RQ04912 1400 aa17.69■□□□□ 0.42
SRPRA-201ENST00000332118 NFE2L2Q16236 605 aa17.69■□□□□ 0.42
SRPRA-201ENST00000332118 ANP32EQ9BTT0 268 aa17.69■□□□□ 0.42
SRPRA-201ENST00000332118 ARHGEF10O15013 1369 aa17.69■□□□□ 0.42
SRPRA-201ENST00000332118 U2SURPO15042 1029 aaKnown RBP17.68■□□□□ 0.42
SRPRA-201ENST00000332118 ZNF853P0CG23 659 aa17.68■□□□□ 0.42
SRPRA-201ENST00000332118 TRHP20396 242 aaPredicted RBP17.68■□□□□ 0.42
SRPRA-201ENST00000332118 ZRANB1Q9UGI0 708 aa17.68■□□□□ 0.42
SRPRA-201ENST00000332118 KDRP35968 1356 aa17.68■□□□□ 0.42
SRPRA-201ENST00000332118 SBNO1A3KN83 1393 aa17.67■□□□□ 0.42
SRPRA-201ENST00000332118 KIF1AQ12756 1690 aa17.67■□□□□ 0.42
SRPRA-201ENST00000332118 NPHP4O75161 1426 aaPredicted RBP17.66■□□□□ 0.42
SRPRA-201ENST00000332118 TRPM3Q9HCF6 1732 aaPredicted RBP17.66■□□□□ 0.42
SRPRA-201ENST00000332118 RIPK4P57078 832 aa17.66■□□□□ 0.42
SRPRA-201ENST00000332118 ALDH1L2Q3SY69 923 aa17.66■□□□□ 0.42
SRPRA-201ENST00000332118 NFAT5O94916 1531 aa17.66■□□□□ 0.42
SRPRA-201ENST00000332118 PRKAR2BP31323 418 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms