RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 GAS2L3Q86XJ1 694 aa18.11■□□□□ 0.49
SNX20-202ENST00000330943 ATP7AQ04656 1500 aa18.11■□□□□ 0.49
SNX20-202ENST00000330943 NRXN1Q9ULB1 1477 aa18.1■□□□□ 0.49
SNX20-202ENST00000330943 SNX21Q969T3 373 aa18.1■□□□□ 0.49
SNX20-202ENST00000330943 GBP4Q96PP9 640 aa18.1■□□□□ 0.49
SNX20-202ENST00000330943 U2SURPO15042 1029 aaKnown RBP18.1■□□□□ 0.49
SNX20-202ENST00000330943 USP32Q8NFA0 1604 aa18.1■□□□□ 0.49
SNX20-202ENST00000330943 ZC3H13Q5T200 1668 aaKnown RBP18.09■□□□□ 0.49
SNX20-202ENST00000330943 NCBP3Q53F19 620 aaKnown RBP18.09■□□□□ 0.49
SNX20-202ENST00000330943 FOXD4L1Q9NU39 408 aa18.09■□□□□ 0.49
SNX20-202ENST00000330943 RRP9O43818 475 aaKnown RBP18.09■□□□□ 0.49
SNX20-202ENST00000330943 ZBTB40Q9NUA8 1239 aa18.09■□□□□ 0.49
SNX20-202ENST00000330943 SETBP1Q9Y6X0 1596 aa18.08■□□□□ 0.49
SNX20-202ENST00000330943 CIZ1Q9ULV3 898 aaPredicted RBP18.08■□□□□ 0.48
SNX20-202ENST00000330943 TMPOP42166 694 aaKnown RBP18.07■□□□□ 0.48
SNX20-202ENST00000330943 NUCB1Q02818 461 aa18.07■□□□□ 0.48
SNX20-202ENST00000330943 CD109Q6YHK3 1445 aa18.07■□□□□ 0.48
SNX20-202ENST00000330943 MROH1Q8NDA8 1641 aa18.07■□□□□ 0.48
SNX20-202ENST00000330943 RAB3GAP1Q15042 981 aa18.07■□□□□ 0.48
SNX20-202ENST00000330943 UHRF1BP1LA0JNW5 1464 aa18.07■□□□□ 0.48
SNX20-202ENST00000330943 VSIG10Q8N0Z9 540 aa18.06■□□□□ 0.48
SNX20-202ENST00000330943 TRIM35Q9UPQ4 493 aa18.06■□□□□ 0.48
SNX20-202ENST00000330943 EFCAB6Q5THR3 1501 aa18.06■□□□□ 0.48
SNX20-202ENST00000330943 INO80Q9ULG1 1556 aaPredicted RBP18.06■□□□□ 0.48
SNX20-202ENST00000330943 SKOR2Q2VWA4 1001 aaPredicted RBP18.05■□□□□ 0.48
SNX20-202ENST00000330943 CHD1LQ86WJ1 897 aa18.05■□□□□ 0.48
SNX20-202ENST00000330943 C14orf93Q9H972 538 aaKnown RBP18.05■□□□□ 0.48
SNX20-202ENST00000330943 CD2BP2O95400 341 aaKnown RBP18.04■□□□□ 0.48
SNX20-202ENST00000330943 ABCC11Q96J66 1382 aa18.04■□□□□ 0.48
SNX20-202ENST00000330943 PLEKHF1Q96S99 279 aa18.04■□□□□ 0.48
SNX20-202ENST00000330943 KIF16BQ96L93 1317 aa18.04■□□□□ 0.48
SNX20-202ENST00000330943 ANKRD36BQ8N2N9 1353 aa18.04■□□□□ 0.48
SNX20-202ENST00000330943 PKNOX2Q96KN3 472 aa18.03■□□□□ 0.48
SNX20-202ENST00000330943 NSD2O96028 1365 aa18.03■□□□□ 0.48
SNX20-202ENST00000330943 PPRC1Q5VV67 1664 aaKnown RBP18.03■□□□□ 0.48
SNX20-202ENST00000330943 KIF2CQ99661 725 aa18.03■□□□□ 0.48
SNX20-202ENST00000330943 ADGRB3O60242 1522 aa18.03■□□□□ 0.48
SNX20-202ENST00000330943 IPO8O15397 1037 aaKnown RBP18.02■□□□□ 0.48
SNX20-202ENST00000330943 ADGRB1O14514 1584 aa18.02■□□□□ 0.48
SNX20-202ENST00000330943 BMP2KLQ5H9B9 411 aa18.02■□□□□ 0.47
SNX20-202ENST00000330943 PTMSP20962 102 aa18.01■□□□□ 0.47
SNX20-202ENST00000330943 EVC2Q86UK5 1308 aa18.01■□□□□ 0.47
SNX20-202ENST00000330943 K7ELQ4 463 aaPredicted RBP18.01■□□□□ 0.47
SNX20-202ENST00000330943 RIPK4P57078 832 aa18.01■□□□□ 0.47
SNX20-202ENST00000330943 ANKRD45Q5TZF3 282 aa18.01■□□□□ 0.47
SNX20-202ENST00000330943 ARAP3Q8WWN8 1544 aa18.01■□□□□ 0.47
SNX20-202ENST00000330943 CABP2Q9NPB3 220 aa18.01■□□□□ 0.47
SNX20-202ENST00000330943 RBM42Q9BTD8 480 aaKnown RBP18■□□□□ 0.47
SNX20-202ENST00000330943 SSFA2P28290 1259 aa18■□□□□ 0.47
SNX20-202ENST00000330943 MLECQ14165 292 aa18■□□□□ 0.47
SNX20-202ENST00000330943 GGNBP2Q9H3C7 697 aa18■□□□□ 0.47
SNX20-202ENST00000330943 CFAP74Q9C0B2 1584 aa18■□□□□ 0.47
SNX20-202ENST00000330943 IL16Q14005 1332 aa17.99■□□□□ 0.47
SNX20-202ENST00000330943 ZMYND15Q9H091 742 aa17.99■□□□□ 0.47
SNX20-202ENST00000330943 STK26Q9P289 416 aa17.99■□□□□ 0.47
SNX20-202ENST00000330943 TULP4Q9NRJ4 1543 aa17.98■□□□□ 0.47
SNX20-202ENST00000330943 TBC1D9Q6ZT07 1266 aa17.98■□□□□ 0.47
SNX20-202ENST00000330943 NASPP49321 788 aaPredicted RBP17.98■□□□□ 0.47
SNX20-202ENST00000330943 C1orf115Q9H7X2 142 aa17.98■□□□□ 0.47
SNX20-202ENST00000330943 PPLO60437 1756 aa17.98■□□□□ 0.47
SNX20-202ENST00000330943 GOLGA6L22H0YM25 854 aa17.97■□□□□ 0.47
SNX20-202ENST00000330943 GAS2L2Q8NHY3 880 aa17.97■□□□□ 0.47
SNX20-202ENST00000330943 CCDC173Q0VFZ6 552 aa17.97■□□□□ 0.47
SNX20-202ENST00000330943 DDX49Q9Y6V7 483 aaKnown RBP17.96■□□□□ 0.47
SNX20-202ENST00000330943 TPM2P07951 284 aa17.95■□□□□ 0.46
SNX20-202ENST00000330943 PPIP5K1Q6PFW1 1433 aa17.95■□□□□ 0.46
SNX20-202ENST00000330943 A0A1W2PP64 1363 aa17.95■□□□□ 0.46
SNX20-202ENST00000330943 ALDH1L2Q3SY69 923 aa17.95■□□□□ 0.46
SNX20-202ENST00000330943 GLI2P10070 1586 aa17.95■□□□□ 0.46
SNX20-202ENST00000330943 COL3A1P02461 1466 aaPredicted RBP17.95■□□□□ 0.46
SNX20-202ENST00000330943 ANP32BQ92688 251 aaKnown RBP17.95■□□□□ 0.46
SNX20-202ENST00000330943 GCC1Q96CN9 775 aa17.94■□□□□ 0.46
SNX20-202ENST00000330943 KIAA1211Q6ZU35 1233 aa17.94■□□□□ 0.46
SNX20-202ENST00000330943 ABCA9Q8IUA7 1624 aa17.94■□□□□ 0.46
SNX20-202ENST00000330943 PPP1R9BQ96SB3 815 aa17.93■□□□□ 0.46
SNX20-202ENST00000330943 BAG4O95429 457 aaKnown RBP17.93■□□□□ 0.46
SNX20-202ENST00000330943 PLPPR3Q6T4P5 718 aa17.93■□□□□ 0.46
SNX20-202ENST00000330943 PUS7Q96PZ0 661 aaKnown RBP17.93■□□□□ 0.46
SNX20-202ENST00000330943 KLHL40Q2TBA0 621 aa17.92■□□□□ 0.46
SNX20-202ENST00000330943 MED14O60244 1454 aa17.92■□□□□ 0.46
SNX20-202ENST00000330943 ZBTB7BO15156 539 aaPredicted RBP17.92■□□□□ 0.46
SNX20-202ENST00000330943 SRPK2P78362 688 aaKnown RBP17.92■□□□□ 0.46
SNX20-202ENST00000330943 ZSCAN30Q86W11 494 aa17.92■□□□□ 0.46
SNX20-202ENST00000330943 FBXO31Q5XUX0 539 aaPredicted RBP17.92■□□□□ 0.46
SNX20-202ENST00000330943 ARHGEF28Q8N1W1 1705 aaKnown RBP17.91■□□□□ 0.46
SNX20-202ENST00000330943 DIAPH1O60610 1272 aaKnown RBP17.91■□□□□ 0.46
SNX20-202ENST00000330943 NPATQ14207 1427 aa17.91■□□□□ 0.46
SNX20-202ENST00000330943 AK9Q5TCS8 1911 aa17.91■□□□□ 0.46
SNX20-202ENST00000330943 LMTK2Q8IWU2 1503 aa17.91■□□□□ 0.46
SNX20-202ENST00000330943 FAM69CQ0P6D2 419 aa17.91■□□□□ 0.46
SNX20-202ENST00000330943 NCLP19338 710 aaKnown RBP17.9■□□□□ 0.46
SNX20-202ENST00000330943 MSNP26038 577 aaKnown RBP17.9■□□□□ 0.46
SNX20-202ENST00000330943 CDC45O75419 566 aa17.89■□□□□ 0.46
SNX20-202ENST00000330943 IBTKQ9P2D0 1353 aaPredicted RBP17.89■□□□□ 0.45
SNX20-202ENST00000330943 MCTP1Q6DN14 999 aa17.89■□□□□ 0.45
SNX20-202ENST00000330943 CLEC17AQ6ZS10 378 aa17.89■□□□□ 0.45
SNX20-202ENST00000330943 FYB1O15117 783 aa17.88■□□□□ 0.45
SNX20-202ENST00000330943 KIDINS220Q9ULH0 1771 aa17.88■□□□□ 0.45
SNX20-202ENST00000330943 RPGRIP1LQ68CZ1 1315 aa17.88■□□□□ 0.45
SNX20-202ENST00000330943 SIRT2Q8IXJ6 389 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms