RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 APAF1O14727 1248 aa26.83■■□□□ 1.89
RIPPLY3-201ENST00000329553 NKTRP30414 1462 aaKnown RBP26.83■■□□□ 1.89
RIPPLY3-201ENST00000329553 FBLN1P23142 703 aa26.81■■□□□ 1.88
RIPPLY3-201ENST00000329553 RGPD8O14715 1765 aaPredicted RBP26.8■■□□□ 1.88
RIPPLY3-201ENST00000329553 IRX6P78412 446 aaPredicted RBP26.79■■□□□ 1.88
RIPPLY3-201ENST00000329553 PMFBP1Q8TBY8 1022 aa26.79■■□□□ 1.88
RIPPLY3-201ENST00000329553 RBM33Q96EV2 1170 aaKnown RBP26.79■■□□□ 1.88
RIPPLY3-201ENST00000329553 RBM19Q9Y4C8 960 aaKnown RBP26.79■■□□□ 1.88
RIPPLY3-201ENST00000329553 TTC21BQ7Z4L5 1316 aa26.78■■□□□ 1.88
RIPPLY3-201ENST00000329553 ZNF521Q96K83 1311 aa26.78■■□□□ 1.88
RIPPLY3-201ENST00000329553 POLKQ9UBT6 870 aa26.77■■□□□ 1.88
RIPPLY3-201ENST00000329553 COL3A1P02461 1466 aaPredicted RBP26.77■■□□□ 1.88
RIPPLY3-201ENST00000329553 COG3Q96JB2 828 aa26.77■■□□□ 1.88
RIPPLY3-201ENST00000329553 USP6P35125 1406 aa26.76■■□□□ 1.87
RIPPLY3-201ENST00000329553 PNPLA6Q8IY17 1366 aa26.76■■□□□ 1.87
RIPPLY3-201ENST00000329553 U2AF1L5P0DN76 240 aaPredicted RBP26.75■■□□□ 1.87
RIPPLY3-201ENST00000329553 U2AF1Q01081 240 aaKnown RBP eCLIP26.75■■□□□ 1.87
RIPPLY3-201ENST00000329553 RUNDC1Q96C34 613 aa26.74■■□□□ 1.87
RIPPLY3-201ENST00000329553 ANKARQ7Z5J8 1434 aa26.74■■□□□ 1.87
RIPPLY3-201ENST00000329553 MAP2P11137 1827 aaKnown RBP26.74■■□□□ 1.87
RIPPLY3-201ENST00000329553 NRKQ7Z2Y5 1582 aa26.74■■□□□ 1.87
RIPPLY3-201ENST00000329553 NALCNQ8IZF0 1738 aa26.73■■□□□ 1.87
RIPPLY3-201ENST00000329553 FMN2Q9NZ56 1722 aa26.73■■□□□ 1.87
RIPPLY3-201ENST00000329553 NGDNQ8NEJ9 315 aaKnown RBP26.73■■□□□ 1.87
RIPPLY3-201ENST00000329553 SSH2Q76I76 1423 aa26.72■■□□□ 1.87
RIPPLY3-201ENST00000329553 PPM1GO15355 546 aaPredicted RBP26.71■■□□□ 1.87
RIPPLY3-201ENST00000329553 RNF123Q5XPI4 1314 aa26.71■■□□□ 1.87
RIPPLY3-201ENST00000329553 KDM4FA0A1W2PPD8 638 aa26.71■■□□□ 1.87
RIPPLY3-201ENST00000329553 AATKQ6ZMQ8 1374 aa26.71■■□□□ 1.87
RIPPLY3-201ENST00000329553 DIAPH1O60610 1272 aaKnown RBP26.7■■□□□ 1.87
RIPPLY3-201ENST00000329553 GOLGA2Q08379 1002 aa26.7■■□□□ 1.87
RIPPLY3-201ENST00000329553 NGEFQ8N5V2 710 aa26.7■■□□□ 1.87
RIPPLY3-201ENST00000329553 U2SURPO15042 1029 aaKnown RBP26.7■■□□□ 1.86
RIPPLY3-201ENST00000329553 EMILIN1Q9Y6C2 1016 aa26.7■■□□□ 1.86
RIPPLY3-201ENST00000329553 TCP11L2Q8N4U5 519 aa26.69■■□□□ 1.86
RIPPLY3-201ENST00000329553 PPP4R2Q9NY27 417 aa26.69■■□□□ 1.86
RIPPLY3-201ENST00000329553 ANP32EQ9BTT0 268 aa26.67■■□□□ 1.86
RIPPLY3-201ENST00000329553 ADGRL3Q9HAR2 1447 aa26.67■■□□□ 1.86
RIPPLY3-201ENST00000329553 RCAN3Q9UKA8 241 aa26.67■■□□□ 1.86
RIPPLY3-201ENST00000329553 HSPA2P54652 639 aa26.66■■□□□ 1.86
RIPPLY3-201ENST00000329553 RRS1Q15050 365 aaKnown RBP26.66■■□□□ 1.86
RIPPLY3-201ENST00000329553 NWD1Q149M9 1564 aa26.65■■□□□ 1.86
RIPPLY3-201ENST00000329553 DUSP27Q5VZP5 1158 aa26.65■■□□□ 1.86
RIPPLY3-201ENST00000329553 TTC21AQ8NDW8 1320 aa26.65■■□□□ 1.86
RIPPLY3-201ENST00000329553 IQSEC2Q5JU85 1478 aa26.65■■□□□ 1.86
RIPPLY3-201ENST00000329553 SLFN5Q08AF3 891 aa26.65■■□□□ 1.86
RIPPLY3-201ENST00000329553 RRP7AQ9Y3A4 280 aaKnown RBP26.65■■□□□ 1.86
RIPPLY3-201ENST00000329553 OVOS2A0A0J9YW53 1432 aa26.65■■□□□ 1.86
RIPPLY3-201ENST00000329553 OVOS2Q6IE36 1432 aa26.65■■□□□ 1.86
RIPPLY3-201ENST00000329553 NEUROD2Q15784 382 aa26.64■■□□□ 1.86
RIPPLY3-201ENST00000329553 WWC1Q8IX03 1113 aa26.63■■□□□ 1.85
RIPPLY3-201ENST00000329553 PLEKHF1Q96S99 279 aa26.63■■□□□ 1.85
RIPPLY3-201ENST00000329553 C14orf37Q86TY3 774 aa26.63■■□□□ 1.85
RIPPLY3-201ENST00000329553 SPINK5Q9NQ38 1064 aaPredicted RBP26.63■■□□□ 1.85
RIPPLY3-201ENST00000329553 PROSER2Q86WR7 435 aaPredicted RBP26.62■■□□□ 1.85
RIPPLY3-201ENST00000329553 TRMT2AQ8IZ69 625 aaKnown RBP26.62■■□□□ 1.85
RIPPLY3-201ENST00000329553 DMRT2Q9Y5R5 561 aa26.62■■□□□ 1.85
RIPPLY3-201ENST00000329553 PHF8Q9UPP1 1060 aa26.61■■□□□ 1.85
RIPPLY3-201ENST00000329553 CDK12Q9NYV4 1490 aaPredicted RBP26.6■■□□□ 1.85
RIPPLY3-201ENST00000329553 PHF23Q9BUL5 403 aaPredicted RBP26.59■■□□□ 1.85
RIPPLY3-201ENST00000329553 USP31Q70CQ4 1352 aa26.58■■□□□ 1.85
RIPPLY3-201ENST00000329553 IL13P35225 146 aa26.58■■□□□ 1.85
RIPPLY3-201ENST00000329553 E9PSI1 815 aa26.57■■□□□ 1.84
RIPPLY3-201ENST00000329553 CCDC27Q2M243 656 aa26.56■■□□□ 1.84
RIPPLY3-201ENST00000329553 NCBP3Q53F19 620 aaKnown RBP26.56■■□□□ 1.84
RIPPLY3-201ENST00000329553 ESCO1Q5FWF5 840 aa26.55■■□□□ 1.84
RIPPLY3-201ENST00000329553 FCHSD2O94868 740 aa26.55■■□□□ 1.84
RIPPLY3-201ENST00000329553 RRP1P56182 461 aaKnown RBP26.55■■□□□ 1.84
RIPPLY3-201ENST00000329553 PNNQ9H307 717 aaKnown RBP26.54■■□□□ 1.84
RIPPLY3-201ENST00000329553 PIK3C2AO00443 1686 aa26.53■■□□□ 1.84
RIPPLY3-201ENST00000329553 SOX12O15370 315 aa26.53■■□□□ 1.84
RIPPLY3-201ENST00000329553 MAPK8IP3Q9UPT6 1336 aa26.53■■□□□ 1.84
RIPPLY3-201ENST00000329553 RSPH6AQ9H0K4 717 aa26.53■■□□□ 1.84
RIPPLY3-201ENST00000329553 TMPOP42166 694 aaKnown RBP26.52■■□□□ 1.84
RIPPLY3-201ENST00000329553 NLRP6P59044 892 aa26.52■■□□□ 1.84
RIPPLY3-201ENST00000329553 LMTK3Q96Q04 1460 aa26.52■■□□□ 1.84
RIPPLY3-201ENST00000329553 WDR63Q8IWG1 891 aa26.51■■□□□ 1.84
RIPPLY3-201ENST00000329553 PAK3O75914 559 aaPredicted RBP26.51■■□□□ 1.83
RIPPLY3-201ENST00000329553 HMOX1P09601 288 aa26.5■■□□□ 1.83
RIPPLY3-201ENST00000329553 C19orf44Q9H6X5 657 aa26.5■■□□□ 1.83
RIPPLY3-201ENST00000329553 STRCP1A6NGW2 1772 aa26.5■■□□□ 1.83
RIPPLY3-201ENST00000329553 ORAI2Q96SN7 254 aa26.5■■□□□ 1.83
RIPPLY3-201ENST00000329553 PRKAR2BP31323 418 aa26.49■■□□□ 1.83
RIPPLY3-201ENST00000329553 NUTM2GQ5VZR2 741 aa26.49■■□□□ 1.83
RIPPLY3-201ENST00000329553 ABTB2Q8N961 1025 aa26.49■■□□□ 1.83
RIPPLY3-201ENST00000329553 LRRC7Q96NW7 1537 aa26.48■■□□□ 1.83
RIPPLY3-201ENST00000329553 PSME1Q06323 249 aa26.47■■□□□ 1.83
RIPPLY3-201ENST00000329553 HSP90AB2PQ58FF8 381 aa26.47■■□□□ 1.83
RIPPLY3-201ENST00000329553 MAP3K19Q56UN5 1328 aa26.47■■□□□ 1.83
RIPPLY3-201ENST00000329553 FANCIQ9NVI1 1328 aa26.47■■□□□ 1.83
RIPPLY3-201ENST00000329553 PEAK1Q9H792 1746 aa26.47■■□□□ 1.83
RIPPLY3-201ENST00000329553 EIF4A2Q14240 407 aaKnown RBP26.46■■□□□ 1.83
RIPPLY3-201ENST00000329553 TRIM35Q9UPQ4 493 aa26.46■■□□□ 1.83
RIPPLY3-201ENST00000329553 TMEM94Q12767 1356 aa26.46■■□□□ 1.83
RIPPLY3-201ENST00000329553 B4GALNT3Q6L9W6 998 aa26.45■■□□□ 1.82
RIPPLY3-201ENST00000329553 RIPK4P57078 832 aa26.45■■□□□ 1.82
RIPPLY3-201ENST00000329553 PHACTR3Q96KR7 559 aa26.44■■□□□ 1.82
RIPPLY3-201ENST00000329553 MARF1Q9Y4F3 1742 aaKnown RBP26.44■■□□□ 1.82
RIPPLY3-201ENST00000329553 PLIN1O60240 522 aa26.43■■□□□ 1.82
RIPPLY3-201ENST00000329553 STRCQ7RTU9 1775 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms