RNA–Protein interactions for RNA: ENST00000328085.10

NPIPA1-201, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPIPA1, Length 1,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-201ENST00000328085 RAD50Q92878 1312 aa11.52□□□□□ -0.57
NPIPA1-201ENST00000328085 CFAP65Q6ZU64 1925 aaKnown RBP11.52□□□□□ -0.57
NPIPA1-201ENST00000328085 MROH2AA6NES4 1674 aa11.52□□□□□ -0.57
NPIPA1-201ENST00000328085 CNPY4Q8N129 248 aa11.51□□□□□ -0.57
NPIPA1-201ENST00000328085 UPF1Q92900 1129 aaKnown RBP eCLIP11.51□□□□□ -0.57
NPIPA1-201ENST00000328085 PDLIM2Q96JY6 352 aa11.51□□□□□ -0.57
NPIPA1-201ENST00000328085 GBP4Q96PP9 640 aa11.51□□□□□ -0.57
NPIPA1-201ENST00000328085 BRMS1Q9HCU9 246 aa11.51□□□□□ -0.57
NPIPA1-201ENST00000328085 CCDC39Q9UFE4 941 aa11.51□□□□□ -0.57
NPIPA1-201ENST00000328085 CCDC18Q5T9S5 1454 aa11.51□□□□□ -0.57
NPIPA1-201ENST00000328085 NASPP49321 788 aaPredicted RBP11.5□□□□□ -0.57
NPIPA1-201ENST00000328085 SETQ01105 290 aaPredicted RBP11.5□□□□□ -0.57
NPIPA1-201ENST00000328085 POLA2Q14181 598 aa11.5□□□□□ -0.57
NPIPA1-201ENST00000328085 CGNQ9P2M7 1197 aaKnown RBP11.5□□□□□ -0.57
NPIPA1-201ENST00000328085 BRD4O60885 1362 aaPredicted RBP11.5□□□□□ -0.57
NPIPA1-201ENST00000328085 VWDEQ8N2E2 1590 aa11.5□□□□□ -0.57
NPIPA1-201ENST00000328085 CLTCQ00610 1675 aaKnown RBP11.49□□□□□ -0.57
NPIPA1-201ENST00000328085 WWC1Q8IX03 1113 aa11.49□□□□□ -0.57
NPIPA1-201ENST00000328085 NEURL4Q96JN8 1562 aa11.49□□□□□ -0.57
NPIPA1-201ENST00000328085 HSPA5P11021 654 aaKnown RBP11.48□□□□□ -0.57
NPIPA1-201ENST00000328085 CCDC184Q52MB2 194 aa11.48□□□□□ -0.57
NPIPA1-201ENST00000328085 GGT6Q6P531 493 aa11.48□□□□□ -0.57
NPIPA1-201ENST00000328085 ZNF771Q7L3S4 317 aaPredicted RBP11.48□□□□□ -0.57
NPIPA1-201ENST00000328085 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.48□□□□□ -0.57
NPIPA1-201ENST00000328085 CCDC9Q9Y3X0 531 aaKnown RBP11.48□□□□□ -0.57
NPIPA1-201ENST00000328085 A2ML1A8K2U0 1454 aa11.48□□□□□ -0.57
NPIPA1-201ENST00000328085 DNMT1P26358 1616 aaKnown RBP11.48□□□□□ -0.57
NPIPA1-201ENST00000328085 KIF14Q15058 1648 aa11.48□□□□□ -0.57
NPIPA1-201ENST00000328085 KIDINS220Q9ULH0 1771 aa11.47□□□□□ -0.57
NPIPA1-201ENST00000328085 MIA2Q96PC5 1412 aa11.47□□□□□ -0.57
NPIPA1-201ENST00000328085 KCNJ4P48050 445 aa11.47□□□□□ -0.57
NPIPA1-201ENST00000328085 ANKLE2Q86XL3 938 aa11.47□□□□□ -0.57
NPIPA1-201ENST00000328085 CARD10Q9BWT7 1032 aa11.47□□□□□ -0.57
NPIPA1-201ENST00000328085 SLKQ9H2G2 1235 aaPredicted RBP11.47□□□□□ -0.57
NPIPA1-201ENST00000328085 USP19O94966 1318 aa11.46□□□□□ -0.57
NPIPA1-201ENST00000328085 HSP90AB3PQ58FF7 597 aa11.46□□□□□ -0.57
NPIPA1-201ENST00000328085 CLEC17AQ6ZS10 378 aa11.46□□□□□ -0.57
NPIPA1-201ENST00000328085 PNISRQ8TF01 805 aaKnown RBP11.46□□□□□ -0.57
NPIPA1-201ENST00000328085 PLCD4Q9BRC7 762 aa11.46□□□□□ -0.57
NPIPA1-201ENST00000328085 RBM28Q9NW13 759 aaKnown RBP11.46□□□□□ -0.57
NPIPA1-201ENST00000328085 LRRC7Q96NW7 1537 aa11.45□□□□□ -0.58
NPIPA1-201ENST00000328085 GOLGA6L22H0YM25 854 aa11.45□□□□□ -0.58
NPIPA1-201ENST00000328085 ZNF445P59923 1031 aa11.45□□□□□ -0.58
NPIPA1-201ENST00000328085 MYCBPQ99417 103 aaPredicted RBP11.45□□□□□ -0.58
NPIPA1-201ENST00000328085 FBXO31Q5XUX0 539 aaPredicted RBP11.44□□□□□ -0.58
NPIPA1-201ENST00000328085 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.44□□□□□ -0.58
NPIPA1-201ENST00000328085 NCOA3Q9Y6Q9 1424 aa11.43□□□□□ -0.58
NPIPA1-201ENST00000328085 SOX12O15370 315 aa11.43□□□□□ -0.58
NPIPA1-201ENST00000328085 KIF1CO43896 1103 aaKnown RBP11.43□□□□□ -0.58
NPIPA1-201ENST00000328085 CALRP27797 417 aaKnown RBP11.43□□□□□ -0.58
NPIPA1-201ENST00000328085 CBX1P83916 185 aa11.43□□□□□ -0.58
NPIPA1-201ENST00000328085 TBC1D32Q96NH3 1257 aa11.43□□□□□ -0.58
NPIPA1-201ENST00000328085 NCAPGQ9BPX3 1015 aa11.43□□□□□ -0.58
NPIPA1-201ENST00000328085 DIAPH3Q9NSV4 1193 aa11.43□□□□□ -0.58
NPIPA1-201ENST00000328085 NLRP1Q9C000 1473 aa11.43□□□□□ -0.58
NPIPA1-201ENST00000328085 NPHP4O75161 1426 aaPredicted RBP11.43□□□□□ -0.58
NPIPA1-201ENST00000328085 ABCC1P33527 1531 aa11.42□□□□□ -0.58
NPIPA1-201ENST00000328085 LMOD3Q0VAK6 560 aa11.42□□□□□ -0.58
NPIPA1-201ENST00000328085 KIAA2012Q0VF49 1180 aa11.42□□□□□ -0.58
NPIPA1-201ENST00000328085 MNS1Q8NEH6 495 aa11.42□□□□□ -0.58
NPIPA1-201ENST00000328085 TMC1Q8TDI8 760 aa11.42□□□□□ -0.58
NPIPA1-201ENST00000328085 RAI14Q9P0K7 980 aa11.42□□□□□ -0.58
NPIPA1-201ENST00000328085 TIAM1Q13009 1591 aa11.41□□□□□ -0.58
NPIPA1-201ENST00000328085 STRCP1A6NGW2 1772 aa11.41□□□□□ -0.58
NPIPA1-201ENST00000328085 CDC42BPBQ9Y5S2 1711 aa11.41□□□□□ -0.58
NPIPA1-201ENST00000328085 ATXN8OSP0DMR3 200 aa11.41□□□□□ -0.58
NPIPA1-201ENST00000328085 SATB1Q01826 763 aa11.41□□□□□ -0.58
NPIPA1-201ENST00000328085 KANK4Q5T7N3 995 aaPredicted RBP11.41□□□□□ -0.58
NPIPA1-201ENST00000328085 RPAINQ86UA6 219 aa11.41□□□□□ -0.58
NPIPA1-201ENST00000328085 ANKRD7Q92527 254 aa11.41□□□□□ -0.58
NPIPA1-201ENST00000328085 POLR3GLQ9BT43 218 aa11.41□□□□□ -0.58
NPIPA1-201ENST00000328085 KCNG1Q9UIX4 513 aa11.41□□□□□ -0.58
NPIPA1-201ENST00000328085 RNF17Q9BXT8 1623 aaKnown RBP11.41□□□□□ -0.58
NPIPA1-201ENST00000328085 DHX29Q7Z478 1369 aaKnown RBP11.41□□□□□ -0.58
NPIPA1-201ENST00000328085 NPC1L1Q9UHC9 1359 aa11.41□□□□□ -0.58
NPIPA1-201ENST00000328085 SPAG9O60271 1321 aaKnown RBP11.4□□□□□ -0.58
NPIPA1-201ENST00000328085 ITSN2Q9NZM3 1697 aa11.4□□□□□ -0.58
NPIPA1-201ENST00000328085 KLHL40Q2TBA0 621 aa11.4□□□□□ -0.58
NPIPA1-201ENST00000328085 THEMISQ8N1K5 641 aaPredicted RBP11.4□□□□□ -0.58
NPIPA1-201ENST00000328085 HIRIP3Q9BW71 556 aaPredicted RBP11.4□□□□□ -0.58
NPIPA1-201ENST00000328085 TBC1D2Q9BYX2 928 aa11.4□□□□□ -0.58
NPIPA1-201ENST00000328085 BSDC1Q9NW68 430 aaPredicted RBP11.4□□□□□ -0.58
NPIPA1-201ENST00000328085 TROQ12816 1431 aaPredicted RBP11.4□□□□□ -0.58
NPIPA1-201ENST00000328085 BRPF1P55201 1214 aaPredicted RBP11.39□□□□□ -0.59
NPIPA1-201ENST00000328085 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.39□□□□□ -0.59
NPIPA1-201ENST00000328085 SLC26A8Q96RN1 970 aa11.39□□□□□ -0.59
NPIPA1-201ENST00000328085 GZF1Q9H116 711 aaPredicted RBP11.39□□□□□ -0.59
NPIPA1-201ENST00000328085 SMC4Q9NTJ3 1288 aa11.39□□□□□ -0.59
NPIPA1-201ENST00000328085 ZNF777Q9ULD5 760 aaPredicted RBP11.39□□□□□ -0.59
NPIPA1-201ENST00000328085 CEP83Q9Y592 693 aa11.39□□□□□ -0.59
NPIPA1-201ENST00000328085 TNRQ92752 1358 aa11.39□□□□□ -0.59
NPIPA1-201ENST00000328085 SAMD9LQ8IVG5 1584 aa11.38□□□□□ -0.59
NPIPA1-201ENST00000328085 HFM1A2PYH4 1435 aa11.38□□□□□ -0.59
NPIPA1-201ENST00000328085 SPATA31E1Q6ZUB1 1445 aa11.38□□□□□ -0.59
NPIPA1-201ENST00000328085 PATL2C9JE40 543 aaKnown RBP11.38□□□□□ -0.59
NPIPA1-201ENST00000328085 HNRNPMP52272 730 aaKnown RBP eCLIP11.38□□□□□ -0.59
NPIPA1-201ENST00000328085 SLC52A1Q9NWF4 448 aa11.38□□□□□ -0.59
NPIPA1-201ENST00000328085 MED14O60244 1454 aa11.38□□□□□ -0.59
NPIPA1-201ENST00000328085 SLFN14P0C7P3 912 aa11.37□□□□□ -0.59
NPIPA1-201ENST00000328085 DDIT3P35638 169 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms