RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 PTPRTO14522 1441 aa17.78■□□□□ 0.44
CHRNA3-201ENST00000326828 RBM25P49756 843 aaKnown RBP17.78■□□□□ 0.44
CHRNA3-201ENST00000326828 CLTCL1P53675 1640 aa17.77■□□□□ 0.44
CHRNA3-201ENST00000326828 KIF2CQ99661 725 aa17.77■□□□□ 0.44
CHRNA3-201ENST00000326828 IPO8O15397 1037 aaKnown RBP17.77■□□□□ 0.43
CHRNA3-201ENST00000326828 SLC24A1O60721 1099 aa17.77■□□□□ 0.43
CHRNA3-201ENST00000326828 PKP1Q13835 747 aa17.77■□□□□ 0.43
CHRNA3-201ENST00000326828 NOS1P29475 1434 aa17.76■□□□□ 0.43
CHRNA3-201ENST00000326828 CCDC27Q2M243 656 aa17.76■□□□□ 0.43
CHRNA3-201ENST00000326828 MPNDQ8N594 471 aa17.76■□□□□ 0.43
CHRNA3-201ENST00000326828 SKOR2Q2VWA4 1001 aaPredicted RBP17.76■□□□□ 0.43
CHRNA3-201ENST00000326828 CEP152O94986 1710 aa17.75■□□□□ 0.43
CHRNA3-201ENST00000326828 DDIT3P35638 169 aa17.75■□□□□ 0.43
CHRNA3-201ENST00000326828 XPCQ01831 940 aaPredicted RBP17.75■□□□□ 0.43
CHRNA3-201ENST00000326828 FOXD4L6Q3SYB3 417 aaPredicted RBP17.75■□□□□ 0.43
CHRNA3-201ENST00000326828 FOXD4L3Q6VB84 417 aaPredicted RBP17.75■□□□□ 0.43
CHRNA3-201ENST00000326828 SNX21Q969T3 373 aa17.75■□□□□ 0.43
CHRNA3-201ENST00000326828 RBM27Q9P2N5 1060 aaKnown RBP17.75■□□□□ 0.43
CHRNA3-201ENST00000326828 PLXNC1O60486 1568 aa17.75■□□□□ 0.43
CHRNA3-201ENST00000326828 BAG4O95429 457 aaKnown RBP17.74■□□□□ 0.43
CHRNA3-201ENST00000326828 HMOX1P09601 288 aa17.74■□□□□ 0.43
CHRNA3-201ENST00000326828 STAC3Q96MF2 364 aa17.74■□□□□ 0.43
CHRNA3-201ENST00000326828 ATAD2Q6PL18 1390 aa17.73■□□□□ 0.43
CHRNA3-201ENST00000326828 CALD1Q05682 793 aaKnown RBP17.73■□□□□ 0.43
CHRNA3-201ENST00000326828 CCDC173Q0VFZ6 552 aa17.73■□□□□ 0.43
CHRNA3-201ENST00000326828 ZSCAN30Q86W11 494 aa17.73■□□□□ 0.43
CHRNA3-201ENST00000326828 RNF214Q8ND24 703 aa17.72■□□□□ 0.43
CHRNA3-201ENST00000326828 IQSEC2Q5JU85 1478 aa17.72■□□□□ 0.43
CHRNA3-201ENST00000326828 CIZ1Q9ULV3 898 aaPredicted RBP17.72■□□□□ 0.43
CHRNA3-201ENST00000326828 ZNF518AQ6AHZ1 1483 aa17.72■□□□□ 0.43
CHRNA3-201ENST00000326828 PRPF40AO75400 957 aaKnown RBP17.72■□□□□ 0.43
CHRNA3-201ENST00000326828 BMP2KLQ5H9B9 411 aa17.72■□□□□ 0.43
CHRNA3-201ENST00000326828 TSPYL6Q8N831 410 aa17.72■□□□□ 0.43
CHRNA3-201ENST00000326828 TRPM2O94759 1503 aa17.71■□□□□ 0.43
CHRNA3-201ENST00000326828 NOL8Q76FK4 1167 aaKnown RBP17.71■□□□□ 0.43
CHRNA3-201ENST00000326828 C16orf71Q8IYS4 520 aaPredicted RBP17.71■□□□□ 0.43
CHRNA3-201ENST00000326828 AK9Q5TCS8 1911 aa17.71■□□□□ 0.43
CHRNA3-201ENST00000326828 CFAP65Q6ZU64 1925 aaKnown RBP17.71■□□□□ 0.43
CHRNA3-201ENST00000326828 KIF16BQ96L93 1317 aa17.71■□□□□ 0.43
CHRNA3-201ENST00000326828 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.7■□□□□ 0.42
CHRNA3-201ENST00000326828 ISY1Q9ULR0 285 aaKnown RBP17.7■□□□□ 0.42
CHRNA3-201ENST00000326828 ZMYM3Q14202 1370 aa17.7■□□□□ 0.42
CHRNA3-201ENST00000326828 MINK1Q8N4C8 1332 aaPredicted RBP17.7■□□□□ 0.42
CHRNA3-201ENST00000326828 CD109Q6YHK3 1445 aa17.7■□□□□ 0.42
CHRNA3-201ENST00000326828 TPM2P07951 284 aa17.7■□□□□ 0.42
CHRNA3-201ENST00000326828 PLCH2O75038 1416 aa17.69■□□□□ 0.42
CHRNA3-201ENST00000326828 SPHKAPQ2M3C7 1700 aa17.69■□□□□ 0.42
CHRNA3-201ENST00000326828 PLEKHF1Q96S99 279 aa17.69■□□□□ 0.42
CHRNA3-201ENST00000326828 EVC2Q86UK5 1308 aa17.69■□□□□ 0.42
CHRNA3-201ENST00000326828 PRKAR2BP31323 418 aa17.68■□□□□ 0.42
CHRNA3-201ENST00000326828 ZGPATQ8N5A5 531 aaKnown RBP17.68■□□□□ 0.42
CHRNA3-201ENST00000326828 RBSNQ9H1K0 784 aa17.68■□□□□ 0.42
CHRNA3-201ENST00000326828 SHPRHQ149N8 1683 aa17.68■□□□□ 0.42
CHRNA3-201ENST00000326828 PRIM1P49642 420 aaKnown RBP17.68■□□□□ 0.42
CHRNA3-201ENST00000326828 DIAPH1O60610 1272 aaKnown RBP17.67■□□□□ 0.42
CHRNA3-201ENST00000326828 ZSCAN23Q3MJ62 389 aa17.67■□□□□ 0.42
CHRNA3-201ENST00000326828 NCOA3Q9Y6Q9 1424 aa17.67■□□□□ 0.42
CHRNA3-201ENST00000326828 KLHL40Q2TBA0 621 aa17.66■□□□□ 0.42
CHRNA3-201ENST00000326828 SIRT2Q8IXJ6 389 aa17.66■□□□□ 0.42
CHRNA3-201ENST00000326828 OTUD7AQ8TE49 926 aaPredicted RBP17.66■□□□□ 0.42
CHRNA3-201ENST00000326828 ABCA6Q8N139 1617 aa17.66■□□□□ 0.42
CHRNA3-201ENST00000326828 ZBTB7BO15156 539 aaPredicted RBP17.66■□□□□ 0.42
CHRNA3-201ENST00000326828 SMARCA5O60264 1052 aaPredicted RBP17.66■□□□□ 0.42
CHRNA3-201ENST00000326828 CDC45O75419 566 aa17.66■□□□□ 0.42
CHRNA3-201ENST00000326828 CT47B1P0C2W7 299 aaPredicted RBP17.66■□□□□ 0.42
CHRNA3-201ENST00000326828 PDCL3Q9H2J4 239 aa17.65■□□□□ 0.42
CHRNA3-201ENST00000326828 SYCE3A1L190 88 aa17.64■□□□□ 0.42
CHRNA3-201ENST00000326828 GSPT1P15170 499 aaKnown RBP17.64■□□□□ 0.42
CHRNA3-201ENST00000326828 C14orf93Q9H972 538 aaKnown RBP17.64■□□□□ 0.42
CHRNA3-201ENST00000326828 PPIP5K1Q6PFW1 1433 aa17.64■□□□□ 0.42
CHRNA3-201ENST00000326828 ERCC6L2Q5T890 1561 aa17.64■□□□□ 0.41
CHRNA3-201ENST00000326828 PHACTR3Q96KR7 559 aa17.64■□□□□ 0.41
CHRNA3-201ENST00000326828 OFD1O75665 1012 aa17.63■□□□□ 0.41
CHRNA3-201ENST00000326828 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.63■□□□□ 0.41
CHRNA3-201ENST00000326828 UQCRHLA0A096LP55 91 aa17.62■□□□□ 0.41
CHRNA3-201ENST00000326828 PTMAP06454 111 aaKnown RBP17.62■□□□□ 0.41
CHRNA3-201ENST00000326828 UQCRHP07919 91 aa17.62■□□□□ 0.41
CHRNA3-201ENST00000326828 DCTN1Q14203 1278 aa17.62■□□□□ 0.41
CHRNA3-201ENST00000326828 GCC1Q96CN9 775 aa17.62■□□□□ 0.41
CHRNA3-201ENST00000326828 PPP1R9BQ96SB3 815 aa17.62■□□□□ 0.41
CHRNA3-201ENST00000326828 FYB1O15117 783 aa17.62■□□□□ 0.41
CHRNA3-201ENST00000326828 PTMSP20962 102 aa17.61■□□□□ 0.41
CHRNA3-201ENST00000326828 PRDM10Q9NQV6 1147 aa17.61■□□□□ 0.41
CHRNA3-201ENST00000326828 NSFL1CQ9UNZ2 370 aaKnown RBP17.61■□□□□ 0.41
CHRNA3-201ENST00000326828 FAM83GA6ND36 823 aa17.6■□□□□ 0.41
CHRNA3-201ENST00000326828 LMBRD1Q9NUN5 540 aa17.6■□□□□ 0.41
CHRNA3-201ENST00000326828 A0A1W2PP64 1363 aa17.6■□□□□ 0.41
CHRNA3-201ENST00000326828 DNTTIP2Q5QJE6 756 aaKnown RBP17.6■□□□□ 0.41
CHRNA3-201ENST00000326828 MAP3K4Q9Y6R4 1608 aa17.6■□□□□ 0.41
CHRNA3-201ENST00000326828 ABCC11Q96J66 1382 aa17.6■□□□□ 0.41
CHRNA3-201ENST00000326828 JARID2Q92833 1246 aaPredicted RBP17.59■□□□□ 0.41
CHRNA3-201ENST00000326828 GPT2Q8TD30 523 aa17.59■□□□□ 0.41
CHRNA3-201ENST00000326828 ANKRD36BQ8N2N9 1353 aa17.59■□□□□ 0.41
CHRNA3-201ENST00000326828 VAMP4O75379 141 aa17.59■□□□□ 0.41
CHRNA3-201ENST00000326828 TSHZ3Q63HK5 1081 aa17.59■□□□□ 0.41
CHRNA3-201ENST00000326828 PLEKHM2Q8IWE5 1019 aa17.58■□□□□ 0.41
CHRNA3-201ENST00000326828 NUCB2P80303 420 aa17.58■□□□□ 0.4
CHRNA3-201ENST00000326828 RABEP1Q15276 862 aa17.58■□□□□ 0.4
CHRNA3-201ENST00000326828 MRPL50Q8N5N7 158 aaKnown RBP17.58■□□□□ 0.4
CHRNA3-201ENST00000326828 KRT24Q2M2I5 525 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms