RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 CEBPAP49715 358 aaPredicted RBP25.49■■□□□ 1.67
SOX2-201ENST00000325404 NFKBIBQ15653 356 aa25.49■■□□□ 1.67
SOX2-201ENST00000325404 MED14O60244 1454 aa25.49■■□□□ 1.67
SOX2-201ENST00000325404 RRP7AQ9Y3A4 280 aaKnown RBP25.48■■□□□ 1.67
SOX2-201ENST00000325404 SETD1AO15047 1707 aaKnown RBP25.48■■□□□ 1.67
SOX2-201ENST00000325404 FER1L4A9Z1Z3 1794 aa25.47■■□□□ 1.67
SOX2-201ENST00000325404 NEUROD2Q15784 382 aa25.47■■□□□ 1.67
SOX2-201ENST00000325404 DLC1Q96QB1 1528 aa25.47■■□□□ 1.67
SOX2-201ENST00000325404 NRXN3Q9Y4C0 1643 aa25.46■■□□□ 1.67
SOX2-201ENST00000325404 FRAT1Q92837 279 aaPredicted RBP25.46■■□□□ 1.67
SOX2-201ENST00000325404 CABP2Q9NPB3 220 aa25.46■■□□□ 1.67
SOX2-201ENST00000325404 USP19O94966 1318 aa25.46■■□□□ 1.67
SOX2-201ENST00000325404 MINK1Q8N4C8 1332 aaPredicted RBP25.46■■□□□ 1.67
SOX2-201ENST00000325404 C3P01024 1663 aa25.45■■□□□ 1.67
SOX2-201ENST00000325404 SRPK2P78362 688 aaKnown RBP25.44■■□□□ 1.66
SOX2-201ENST00000325404 ATAD2Q6PL18 1390 aa25.44■■□□□ 1.66
SOX2-201ENST00000325404 U2AF1L5P0DN76 240 aaPredicted RBP25.43■■□□□ 1.66
SOX2-201ENST00000325404 SLC4A3P48751 1232 aa25.43■■□□□ 1.66
SOX2-201ENST00000325404 U2AF1Q01081 240 aaKnown RBP eCLIP25.43■■□□□ 1.66
SOX2-201ENST00000325404 RWDD1Q9H446 243 aaPredicted RBP25.42■■□□□ 1.66
SOX2-201ENST00000325404 COL3A1P02461 1466 aaPredicted RBP25.42■■□□□ 1.66
SOX2-201ENST00000325404 A0A1W2PP64 1363 aa25.42■■□□□ 1.66
SOX2-201ENST00000325404 RLBP1P12271 317 aa25.41■■□□□ 1.66
SOX2-201ENST00000325404 ANKRD26Q9UPS8 1709 aa25.41■■□□□ 1.66
SOX2-201ENST00000325404 PCDHB15Q9Y5E8 787 aa25.41■■□□□ 1.66
SOX2-201ENST00000325404 IL16Q14005 1332 aa25.41■■□□□ 1.66
SOX2-201ENST00000325404 METP08581 1390 aa25.4■■□□□ 1.66
SOX2-201ENST00000325404 GSE1Q14687 1217 aa25.4■■□□□ 1.66
SOX2-201ENST00000325404 PLEKHF1Q96S99 279 aa25.39■■□□□ 1.66
SOX2-201ENST00000325404 PLPPR3Q6T4P5 718 aa25.39■■□□□ 1.65
SOX2-201ENST00000325404 MVPQ14764 893 aaKnown RBP25.38■■□□□ 1.65
SOX2-201ENST00000325404 ZKSCAN2Q63HK3 967 aa25.38■■□□□ 1.65
SOX2-201ENST00000325404 TERF2IPQ9NYB0 399 aa25.38■■□□□ 1.65
SOX2-201ENST00000325404 BECN1Q14457 450 aa25.36■■□□□ 1.65
SOX2-201ENST00000325404 WAPLQ7Z5K2 1190 aa25.36■■□□□ 1.65
SOX2-201ENST00000325404 PLEKHG1Q9ULL1 1385 aa25.35■■□□□ 1.65
SOX2-201ENST00000325404 CDK19Q9BWU1 502 aa25.35■■□□□ 1.65
SOX2-201ENST00000325404 PNNQ9H307 717 aaKnown RBP25.35■■□□□ 1.65
SOX2-201ENST00000325404 TMPOP42166 694 aaKnown RBP25.34■■□□□ 1.65
SOX2-201ENST00000325404 DZIP1LQ8IYY4 767 aaKnown RBP25.34■■□□□ 1.65
SOX2-201ENST00000325404 PDZRN3Q9UPQ7 1066 aa25.34■■□□□ 1.65
SOX2-201ENST00000325404 CD163L1Q9NR16 1453 aa25.33■■□□□ 1.65
SOX2-201ENST00000325404 LTKP29376 864 aa25.33■■□□□ 1.65
SOX2-201ENST00000325404 EID1Q9Y6B2 187 aa25.33■■□□□ 1.65
SOX2-201ENST00000325404 PNPLA6Q8IY17 1366 aa25.33■■□□□ 1.65
SOX2-201ENST00000325404 TXNDC2Q86VQ3 553 aa25.33■■□□□ 1.65
SOX2-201ENST00000325404 TECPR2O15040 1411 aa25.33■■□□□ 1.65
SOX2-201ENST00000325404 ADAMTS13Q76LX8 1427 aa25.32■■□□□ 1.64
SOX2-201ENST00000325404 UPF2Q9HAU5 1272 aaKnown RBP25.32■■□□□ 1.64
SOX2-201ENST00000325404 SIRT1Q96EB6 747 aa25.31■■□□□ 1.64
SOX2-201ENST00000325404 TNNQ9UQP3 1299 aa25.31■■□□□ 1.64
SOX2-201ENST00000325404 SLIT1O75093 1534 aa25.31■■□□□ 1.64
SOX2-201ENST00000325404 KNDC1Q76NI1 1749 aa25.31■■□□□ 1.64
SOX2-201ENST00000325404 FYB1O15117 783 aa25.31■■□□□ 1.64
SOX2-201ENST00000325404 SEC24BO95487 1268 aa25.31■■□□□ 1.64
SOX2-201ENST00000325404 TRIM35Q9UPQ4 493 aa25.31■■□□□ 1.64
SOX2-201ENST00000325404 FAM135BQ49AJ0 1406 aa25.31■■□□□ 1.64
SOX2-201ENST00000325404 ARHGAP23Q9P227 1491 aa25.3■■□□□ 1.64
SOX2-201ENST00000325404 HDAC1Q13547 482 aaPredicted RBP25.29■■□□□ 1.64
SOX2-201ENST00000325404 BCL2L13Q9BXK5 485 aa25.29■■□□□ 1.64
SOX2-201ENST00000325404 CDC42BPGQ6DT37 1551 aa25.29■■□□□ 1.64
SOX2-201ENST00000325404 FTSJ3Q8IY81 847 aaKnown RBP25.29■■□□□ 1.64
SOX2-201ENST00000325404 THEMISQ8N1K5 641 aaPredicted RBP25.29■■□□□ 1.64
SOX2-201ENST00000325404 CPS1P31327 1500 aa25.28■■□□□ 1.64
SOX2-201ENST00000325404 TBC1D32Q96NH3 1257 aa25.28■■□□□ 1.64
SOX2-201ENST00000325404 GGNBP2Q9H3C7 697 aa25.27■■□□□ 1.64
SOX2-201ENST00000325404 DDX19BQ9UMR2 479 aa25.27■■□□□ 1.64
SOX2-201ENST00000325404 HDGFL2Q7Z4V5 671 aaPredicted RBP25.27■■□□□ 1.64
SOX2-201ENST00000325404 EXOSC9Q06265 439 aaKnown RBP25.26■■□□□ 1.63
SOX2-201ENST00000325404 U2SURPO15042 1029 aaKnown RBP25.25■■□□□ 1.63
SOX2-201ENST00000325404 SMC4Q9NTJ3 1288 aa25.25■■□□□ 1.63
SOX2-201ENST00000325404 DIAPH1O60610 1272 aaKnown RBP25.24■■□□□ 1.63
SOX2-201ENST00000325404 ATF7IPQ6VMQ6 1270 aa25.24■■□□□ 1.63
SOX2-201ENST00000325404 FRAT2O75474 233 aaPredicted RBP25.24■■□□□ 1.63
SOX2-201ENST00000325404 RIMS1Q86UR5 1692 aaKnown RBP25.24■■□□□ 1.63
SOX2-201ENST00000325404 WASLO00401 505 aaPredicted RBP25.23■■□□□ 1.63
SOX2-201ENST00000325404 TSR2Q969E8 191 aaKnown RBP25.23■■□□□ 1.63
SOX2-201ENST00000325404 CABP1Q9NZU7 370 aa25.23■■□□□ 1.63
SOX2-201ENST00000325404 TRIM27P14373 513 aa25.23■■□□□ 1.63
SOX2-201ENST00000325404 SSH1Q8WYL5 1049 aa25.23■■□□□ 1.63
SOX2-201ENST00000325404 ZNF428Q96B54 188 aa25.22■■□□□ 1.63
SOX2-201ENST00000325404 KIF20BQ96Q89 1820 aa25.22■■□□□ 1.63
SOX2-201ENST00000325404 FCHSD2O94868 740 aa25.22■■□□□ 1.63
SOX2-201ENST00000325404 ALDH1L2Q3SY69 923 aa25.22■■□□□ 1.63
SOX2-201ENST00000325404 KIF16BQ96L93 1317 aa25.21■■□□□ 1.63
SOX2-201ENST00000325404 IPO8O15397 1037 aaKnown RBP25.21■■□□□ 1.63
SOX2-201ENST00000325404 SLC26A8Q96RN1 970 aa25.21■■□□□ 1.63
SOX2-201ENST00000325404 BRPF1P55201 1214 aaPredicted RBP25.2■■□□□ 1.62
SOX2-201ENST00000325404 ROBO2Q9HCK4 1378 aa25.2■■□□□ 1.62
SOX2-201ENST00000325404 RIPK4P57078 832 aa25.2■■□□□ 1.62
SOX2-201ENST00000325404 ATP7BP35670 1465 aa25.19■■□□□ 1.62
SOX2-201ENST00000325404 PPIP5K1Q6PFW1 1433 aa25.19■■□□□ 1.62
SOX2-201ENST00000325404 SMC5Q8IY18 1101 aa25.19■■□□□ 1.62
SOX2-201ENST00000325404 CEP170BQ9Y4F5 1589 aaPredicted RBP25.18■■□□□ 1.62
SOX2-201ENST00000325404 TBX22Q9Y458 520 aa25.18■■□□□ 1.62
SOX2-201ENST00000325404 ANTXR1Q9H6X2 564 aa25.17■■□□□ 1.62
SOX2-201ENST00000325404 ADAMTSL3P82987 1691 aa25.16■■□□□ 1.62
SOX2-201ENST00000325404 NOB1Q9ULX3 412 aaKnown RBP25.16■■□□□ 1.62
SOX2-201ENST00000325404 ZBTB40Q9NUA8 1239 aa25.15■■□□□ 1.62
SOX2-201ENST00000325404 IL27Q8NEV9 243 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms