RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 STAC3Q96MF2 364 aa17.4■□□□□ 0.38
NUP98-201ENST00000324932 DACH1Q9UI36 760 aa17.4■□□□□ 0.38
NUP98-201ENST00000324932 SERPINC1P01008 464 aa17.4■□□□□ 0.38
NUP98-201ENST00000324932 PDE3AQ14432 1141 aa17.4■□□□□ 0.38
NUP98-201ENST00000324932 CIZ1Q9ULV3 898 aaPredicted RBP17.4■□□□□ 0.38
NUP98-201ENST00000324932 SKIDA1Q1XH10 827 aa17.4■□□□□ 0.38
NUP98-201ENST00000324932 PPFIBP1Q86W92 1011 aa17.4■□□□□ 0.38
NUP98-201ENST00000324932 CECR2Q9BXF3 1484 aa17.39■□□□□ 0.37
NUP98-201ENST00000324932 DEF6Q9H4E7 631 aa17.38■□□□□ 0.37
NUP98-201ENST00000324932 RAPGEF2Q9Y4G8 1499 aa17.38■□□□□ 0.37
NUP98-201ENST00000324932 CBFA2T2O43439 604 aa17.38■□□□□ 0.37
NUP98-201ENST00000324932 TNMDQ9H2S6 317 aa17.38■□□□□ 0.37
NUP98-201ENST00000324932 BACH2Q9BYV9 841 aa17.38■□□□□ 0.37
NUP98-201ENST00000324932 BRPF1P55201 1214 aaPredicted RBP17.37■□□□□ 0.37
NUP98-201ENST00000324932 PODXL2Q9NZ53 605 aa17.37■□□□□ 0.37
NUP98-201ENST00000324932 CCDC181Q5TID7 509 aa17.37■□□□□ 0.37
NUP98-201ENST00000324932 K7ELQ4 463 aaPredicted RBP17.37■□□□□ 0.37
NUP98-201ENST00000324932 NEFHP12036 1026 aa17.37■□□□□ 0.37
NUP98-201ENST00000324932 INCENPQ9NQS7 918 aa17.37■□□□□ 0.37
NUP98-201ENST00000324932 KRT85P78386 507 aa17.37■□□□□ 0.37
NUP98-201ENST00000324932 ANKRD18AQ8IVF6 992 aa17.37■□□□□ 0.37
NUP98-201ENST00000324932 RIC3Q7Z5B4 369 aa17.37■□□□□ 0.37
NUP98-201ENST00000324932 ABCC8Q09428 1581 aa17.36■□□□□ 0.37
NUP98-201ENST00000324932 IQCEQ6IPM2 695 aa17.36■□□□□ 0.37
NUP98-201ENST00000324932 SURF6O75683 361 aaKnown RBP17.36■□□□□ 0.37
NUP98-201ENST00000324932 SYCP1Q15431 976 aa17.36■□□□□ 0.37
NUP98-201ENST00000324932 ANKRD1Q15327 319 aa17.36■□□□□ 0.37
NUP98-201ENST00000324932 CCAR1Q8IX12 1150 aaKnown RBP17.36■□□□□ 0.37
NUP98-201ENST00000324932 CNKSR2Q8WXI2 1034 aa17.36■□□□□ 0.37
NUP98-201ENST00000324932 TDRD9Q8NDG6 1382 aaKnown RBP17.36■□□□□ 0.37
NUP98-201ENST00000324932 ATP2B1P20020 1258 aa17.35■□□□□ 0.37
NUP98-201ENST00000324932 CDK5RAP3Q96JB5 506 aa17.35■□□□□ 0.37
NUP98-201ENST00000324932 TBC1D2BQ9UPU7 963 aa17.35■□□□□ 0.37
NUP98-201ENST00000324932 ZSCAN30Q86W11 494 aa17.34■□□□□ 0.37
NUP98-201ENST00000324932 EVA1CP58658 441 aa17.34■□□□□ 0.37
NUP98-201ENST00000324932 CYP46A1Q9Y6A2 500 aa17.34■□□□□ 0.37
NUP98-201ENST00000324932 MIA2Q96PC5 1412 aa17.34■□□□□ 0.37
NUP98-201ENST00000324932 MCM4P33991 863 aa17.33■□□□□ 0.37
NUP98-201ENST00000324932 ERC1Q8IUD2 1116 aa17.33■□□□□ 0.37
NUP98-201ENST00000324932 ADAMTS8Q9UP79 889 aa17.33■□□□□ 0.37
NUP98-201ENST00000324932 STIM1Q13586 685 aa17.33■□□□□ 0.36
NUP98-201ENST00000324932 CEP57L1Q8IYX8 460 aa17.33■□□□□ 0.36
NUP98-201ENST00000324932 SEPT7Q16181 437 aaKnown RBP17.33■□□□□ 0.36
NUP98-201ENST00000324932 KIF2AO00139 706 aaPredicted RBP17.32■□□□□ 0.36
NUP98-201ENST00000324932 PDIA4P13667 645 aaKnown RBP17.31■□□□□ 0.36
NUP98-201ENST00000324932 TCP11L2Q8N4U5 519 aa17.31■□□□□ 0.36
NUP98-201ENST00000324932 UBXN4Q92575 508 aa17.31■□□□□ 0.36
NUP98-201ENST00000324932 GBP3Q9H0R5 595 aa17.31■□□□□ 0.36
NUP98-201ENST00000324932 EZRP15311 586 aaKnown RBP17.31■□□□□ 0.36
NUP98-201ENST00000324932 ME1P48163 572 aa17.31■□□□□ 0.36
NUP98-201ENST00000324932 CCDC30Q5VVM6 783 aa17.31■□□□□ 0.36
NUP98-201ENST00000324932 HMOX1P09601 288 aa17.31■□□□□ 0.36
NUP98-201ENST00000324932 CEBPZQ03701 1054 aaKnown RBP17.3■□□□□ 0.36
NUP98-201ENST00000324932 ENOX2Q16206 610 aaKnown RBP17.3■□□□□ 0.36
NUP98-201ENST00000324932 LRRCC1Q9C099 1032 aa17.3■□□□□ 0.36
NUP98-201ENST00000324932 RBM33Q96EV2 1170 aaKnown RBP17.3■□□□□ 0.36
NUP98-201ENST00000324932 CCDC102AQ96A19 550 aa17.3■□□□□ 0.36
NUP98-201ENST00000324932 CDCA7LQ96GN5 454 aa17.29■□□□□ 0.36
NUP98-201ENST00000324932 KRT18P05783 430 aaKnown RBP17.29■□□□□ 0.36
NUP98-201ENST00000324932 NUP62CLQ9H1M0 184 aa17.29■□□□□ 0.36
NUP98-201ENST00000324932 TMCO3Q6UWJ1 677 aa17.28■□□□□ 0.36
NUP98-201ENST00000324932 RAPGEF4Q8WZA2 1011 aa17.28■□□□□ 0.36
NUP98-201ENST00000324932 DNAJC2Q99543 621 aaKnown RBP17.28■□□□□ 0.36
NUP98-201ENST00000324932 FYB1O15117 783 aa17.28■□□□□ 0.36
NUP98-201ENST00000324932 AIMP1Q12904 312 aaKnown RBP17.28■□□□□ 0.36
NUP98-201ENST00000324932 GNAI2P04899 355 aa17.28■□□□□ 0.36
NUP98-201ENST00000324932 SLC3A2P08195 630 aaKnown RBP17.28■□□□□ 0.36
NUP98-201ENST00000324932 LARP1BQ659C4 914 aaKnown RBP17.28■□□□□ 0.36
NUP98-201ENST00000324932 TRIM22Q8IYM9 498 aa17.28■□□□□ 0.36
NUP98-201ENST00000324932 ZSCAN31Q96LW9 406 aaPredicted RBP17.28■□□□□ 0.36
NUP98-201ENST00000324932 TAX1BP1Q86VP1 789 aa17.27■□□□□ 0.36
NUP98-201ENST00000324932 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.36
NUP98-201ENST00000324932 ANKRD62A6NC57 917 aa17.27■□□□□ 0.35
NUP98-201ENST00000324932 EXOSC9Q06265 439 aaKnown RBP17.27■□□□□ 0.35
NUP98-201ENST00000324932 MPNDQ8N594 471 aa17.27■□□□□ 0.35
NUP98-201ENST00000324932 FAM177A1Q8N128 213 aaPredicted RBP17.27■□□□□ 0.35
NUP98-201ENST00000324932 CENPHQ9H3R5 247 aa17.27■□□□□ 0.35
NUP98-201ENST00000324932 CFAP45Q9UL16 551 aa17.27■□□□□ 0.35
NUP98-201ENST00000324932 WASHC2AQ641Q2 1341 aa17.26■□□□□ 0.35
NUP98-201ENST00000324932 ERICH4A6NGS2 130 aa17.26■□□□□ 0.35
NUP98-201ENST00000324932 SMTNL1A8MU46 457 aa17.26■□□□□ 0.35
NUP98-201ENST00000324932 SPATA32Q96LK8 384 aa17.26■□□□□ 0.35
NUP98-201ENST00000324932 UPF3BQ9BZI7 483 aaKnown RBP17.26■□□□□ 0.35
NUP98-201ENST00000324932 GIMAP7Q8NHV1 300 aa17.26■□□□□ 0.35
NUP98-201ENST00000324932 FILIP1Q7Z7B0 1213 aa17.25■□□□□ 0.35
NUP98-201ENST00000324932 GGNBP2Q9H3C7 697 aa17.25■□□□□ 0.35
NUP98-201ENST00000324932 PPP6R1Q9UPN7 881 aa17.25■□□□□ 0.35
NUP98-201ENST00000324932 KDM4AO75164 1064 aa17.25■□□□□ 0.35
NUP98-201ENST00000324932 DYDC1Q8WWB3 177 aa17.25■□□□□ 0.35
NUP98-201ENST00000324932 KRI1Q8N9T8 703 aaKnown RBP17.25■□□□□ 0.35
NUP98-201ENST00000324932 PDCL3Q9H2J4 239 aa17.25■□□□□ 0.35
NUP98-201ENST00000324932 FAM193AP78312 1265 aa17.24■□□□□ 0.35
NUP98-201ENST00000324932 TWISTNBQ3B726 338 aaPredicted RBP17.24■□□□□ 0.35
NUP98-201ENST00000324932 SHTN1A0MZ66 631 aa17.24■□□□□ 0.35
NUP98-201ENST00000324932 GAS2L2Q8NHY3 880 aa17.24■□□□□ 0.35
NUP98-201ENST00000324932 MSH5O43196 834 aa17.24■□□□□ 0.35
NUP98-201ENST00000324932 ARHGAP29Q52LW3 1261 aa17.24■□□□□ 0.35
NUP98-201ENST00000324932 MTHFSP49914 203 aa17.24■□□□□ 0.35
NUP98-201ENST00000324932 CRACR2AQ9BSW2 395 aa17.24■□□□□ 0.35
NUP98-201ENST00000324932 LRRFIP2Q9Y608 721 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms