RNA–Protein interactions for RNA: ENST00000324866.11

LRTOMT-203, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-203ENST00000324866 SLIT1O75093 1534 aa11.78□□□□□ -0.52
LRTOMT-203ENST00000324866 GGNBP2Q9H3C7 697 aa11.77□□□□□ -0.52
LRTOMT-203ENST00000324866 ITSN1Q15811 1721 aa11.77□□□□□ -0.53
LRTOMT-203ENST00000324866 ARHGAP23Q9P227 1491 aa11.77□□□□□ -0.53
LRTOMT-203ENST00000324866 CT47B1P0C2W7 299 aaPredicted RBP11.77□□□□□ -0.53
LRTOMT-203ENST00000324866 AAMPQ13685 434 aa11.77□□□□□ -0.53
LRTOMT-203ENST00000324866 CENPQQ7L2Z9 268 aaPredicted RBP11.77□□□□□ -0.53
LRTOMT-203ENST00000324866 WAPLQ7Z5K2 1190 aa11.77□□□□□ -0.53
LRTOMT-203ENST00000324866 PNNQ9H307 717 aaKnown RBP11.77□□□□□ -0.53
LRTOMT-203ENST00000324866 C3P01024 1663 aa11.77□□□□□ -0.53
LRTOMT-203ENST00000324866 TOPAZ1Q8N9V7 1692 aa11.77□□□□□ -0.53
LRTOMT-203ENST00000324866 IL16Q14005 1332 aa11.76□□□□□ -0.53
LRTOMT-203ENST00000324866 MSH5O43196 834 aa11.76□□□□□ -0.53
LRTOMT-203ENST00000324866 AATKQ6ZMQ8 1374 aa11.76□□□□□ -0.53
LRTOMT-203ENST00000324866 U2AF1L5P0DN76 240 aaPredicted RBP11.76□□□□□ -0.53
LRTOMT-203ENST00000324866 U2AF1Q01081 240 aaKnown RBP eCLIP11.76□□□□□ -0.53
LRTOMT-203ENST00000324866 PPIP5K1Q6PFW1 1433 aa11.76□□□□□ -0.53
LRTOMT-203ENST00000324866 MYH16Q9H6N6 1097 aa11.75□□□□□ -0.53
LRTOMT-203ENST00000324866 DIP2AQ14689 1571 aa11.75□□□□□ -0.53
LRTOMT-203ENST00000324866 MAP2P11137 1827 aaKnown RBP11.74□□□□□ -0.53
LRTOMT-203ENST00000324866 CDK12Q9NYV4 1490 aaPredicted RBP11.74□□□□□ -0.53
LRTOMT-203ENST00000324866 DIAPH1O60610 1272 aaKnown RBP11.74□□□□□ -0.53
LRTOMT-203ENST00000324866 NRKQ7Z2Y5 1582 aa11.73□□□□□ -0.53
LRTOMT-203ENST00000324866 FER1L4A9Z1Z3 1794 aa11.73□□□□□ -0.53
LRTOMT-203ENST00000324866 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.73□□□□□ -0.53
LRTOMT-203ENST00000324866 BCAR3O75815 825 aa11.73□□□□□ -0.53
LRTOMT-203ENST00000324866 RARSP54136 660 aaKnown RBP11.73□□□□□ -0.53
LRTOMT-203ENST00000324866 ZNF692Q9BU19 519 aaPredicted RBP11.72□□□□□ -0.53
LRTOMT-203ENST00000324866 CCDC61Q9Y6R9 512 aa11.72□□□□□ -0.53
LRTOMT-203ENST00000324866 FCHSD2O94868 740 aa11.72□□□□□ -0.53
LRTOMT-203ENST00000324866 TMPOP42166 694 aaKnown RBP11.72□□□□□ -0.53
LRTOMT-203ENST00000324866 NUDT16Q96DE0 195 aaKnown RBP11.72□□□□□ -0.53
LRTOMT-203ENST00000324866 BACH2Q9BYV9 841 aa11.71□□□□□ -0.53
LRTOMT-203ENST00000324866 POLKQ9UBT6 870 aa11.71□□□□□ -0.53
LRTOMT-203ENST00000324866 RRP7AQ9Y3A4 280 aaKnown RBP11.71□□□□□ -0.53
LRTOMT-203ENST00000324866 ROBO2Q9HCK4 1378 aa11.71□□□□□ -0.53
LRTOMT-203ENST00000324866 LRRC7Q96NW7 1537 aa11.71□□□□□ -0.53
LRTOMT-203ENST00000324866 CEBPAP49715 358 aaPredicted RBP11.71□□□□□ -0.54
LRTOMT-203ENST00000324866 TXNDC2Q86VQ3 553 aa11.71□□□□□ -0.54
LRTOMT-203ENST00000324866 RIMS1Q86UR5 1692 aaKnown RBP11.71□□□□□ -0.54
LRTOMT-203ENST00000324866 PTCH1Q13635 1447 aa11.7□□□□□ -0.54
LRTOMT-203ENST00000324866 SENP3Q9H4L4 574 aaPredicted RBP11.7□□□□□ -0.54
LRTOMT-203ENST00000324866 TRIM35Q9UPQ4 493 aa11.7□□□□□ -0.54
LRTOMT-203ENST00000324866 MAPK8IP3Q9UPT6 1336 aa11.7□□□□□ -0.54
LRTOMT-203ENST00000324866 PDE4AP27815 886 aa11.7□□□□□ -0.54
LRTOMT-203ENST00000324866 NALCNQ8IZF0 1738 aa11.69□□□□□ -0.54
LRTOMT-203ENST00000324866 PLEKHG3A1L390 1219 aa11.69□□□□□ -0.54
LRTOMT-203ENST00000324866 U2SURPO15042 1029 aaKnown RBP11.69□□□□□ -0.54
LRTOMT-203ENST00000324866 NEUROD2Q15784 382 aa11.69□□□□□ -0.54
LRTOMT-203ENST00000324866 TBX22Q9Y458 520 aa11.69□□□□□ -0.54
LRTOMT-203ENST00000324866 LTKP29376 864 aa11.68□□□□□ -0.54
LRTOMT-203ENST00000324866 PRR36Q9H6K5 1346 aa11.68□□□□□ -0.54
LRTOMT-203ENST00000324866 PTPRUQ92729 1446 aa11.68□□□□□ -0.54
LRTOMT-203ENST00000324866 XRN1Q8IZH2 1706 aaKnown RBP11.68□□□□□ -0.54
LRTOMT-203ENST00000324866 ANP32AP39687 249 aaKnown RBP11.68□□□□□ -0.54
LRTOMT-203ENST00000324866 RSPH6AQ9H0K4 717 aa11.68□□□□□ -0.54
LRTOMT-203ENST00000324866 CLUAP1Q96AJ1 413 aa11.67□□□□□ -0.54
LRTOMT-203ENST00000324866 EID1Q9Y6B2 187 aa11.67□□□□□ -0.54
LRTOMT-203ENST00000324866 SSH2Q76I76 1423 aa11.66□□□□□ -0.54
LRTOMT-203ENST00000324866 IL13P35225 146 aa11.66□□□□□ -0.54
LRTOMT-203ENST00000324866 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.66□□□□□ -0.54
LRTOMT-203ENST00000324866 IPO9Q96P70 1041 aaKnown RBP11.66□□□□□ -0.54
LRTOMT-203ENST00000324866 OVOS2A0A0J9YW53 1432 aa11.66□□□□□ -0.54
LRTOMT-203ENST00000324866 OVOS2Q6IE36 1432 aa11.66□□□□□ -0.54
LRTOMT-203ENST00000324866 PIK3R4Q99570 1358 aa11.65□□□□□ -0.54
LRTOMT-203ENST00000324866 NME9Q86XW9 330 aa11.65□□□□□ -0.54
LRTOMT-203ENST00000324866 ZNF428Q96B54 188 aa11.65□□□□□ -0.54
LRTOMT-203ENST00000324866 COG3Q96JB2 828 aa11.65□□□□□ -0.54
LRTOMT-203ENST00000324866 CANXP27824 592 aaKnown RBP11.65□□□□□ -0.55
LRTOMT-203ENST00000324866 RIPK4P57078 832 aa11.65□□□□□ -0.55
LRTOMT-203ENST00000324866 VIRMAQ69YN4 1812 aaKnown RBP11.64□□□□□ -0.55
LRTOMT-203ENST00000324866 USP6P35125 1406 aa11.64□□□□□ -0.55
LRTOMT-203ENST00000324866 USP31Q70CQ4 1352 aa11.64□□□□□ -0.55
LRTOMT-203ENST00000324866 BRPF1P55201 1214 aaPredicted RBP11.64□□□□□ -0.55
LRTOMT-203ENST00000324866 THEMISQ8N1K5 641 aaPredicted RBP11.64□□□□□ -0.55
LRTOMT-203ENST00000324866 USP54Q70EL1 1684 aa11.64□□□□□ -0.55
LRTOMT-203ENST00000324866 TTC21BQ7Z4L5 1316 aa11.64□□□□□ -0.55
LRTOMT-203ENST00000324866 CALD1Q05682 793 aaKnown RBP11.64□□□□□ -0.55
LRTOMT-203ENST00000324866 NFE2L2Q16236 605 aa11.64□□□□□ -0.55
LRTOMT-203ENST00000324866 PMFBP1Q8TBY8 1022 aa11.64□□□□□ -0.55
LRTOMT-203ENST00000324866 PANK1Q8TE04 598 aa11.64□□□□□ -0.55
LRTOMT-203ENST00000324866 ZKSCAN2Q63HK3 967 aa11.63□□□□□ -0.55
LRTOMT-203ENST00000324866 NOP58Q9Y2X3 529 aaKnown RBP11.63□□□□□ -0.55
LRTOMT-203ENST00000324866 RGPD1P0DJD0 1748 aa11.63□□□□□ -0.55
LRTOMT-203ENST00000324866 NEFMP07197 916 aa11.62□□□□□ -0.55
LRTOMT-203ENST00000324866 PRKAR2BP31323 418 aa11.62□□□□□ -0.55
LRTOMT-203ENST00000324866 ALDH1L2Q3SY69 923 aa11.62□□□□□ -0.55
LRTOMT-203ENST00000324866 COG6Q9Y2V7 657 aa11.62□□□□□ -0.55
LRTOMT-203ENST00000324866 ANKARQ7Z5J8 1434 aa11.62□□□□□ -0.55
LRTOMT-203ENST00000324866 ZNF142P52746 1687 aaPredicted RBP11.62□□□□□ -0.55
LRTOMT-203ENST00000324866 EXOSC9Q06265 439 aaKnown RBP11.62□□□□□ -0.55
LRTOMT-203ENST00000324866 CEP170BQ9Y4F5 1589 aaPredicted RBP11.62□□□□□ -0.55
LRTOMT-203ENST00000324866 EMILIN1Q9Y6C2 1016 aa11.62□□□□□ -0.55
LRTOMT-203ENST00000324866 DLG5Q8TDM6 1919 aa11.62□□□□□ -0.55
LRTOMT-203ENST00000324866 TTC21AQ8NDW8 1320 aa11.62□□□□□ -0.55
LRTOMT-203ENST00000324866 FAM161AQ3B820 660 aa11.61□□□□□ -0.55
LRTOMT-203ENST00000324866 ADAMTSL3P82987 1691 aa11.61□□□□□ -0.55
LRTOMT-203ENST00000324866 MVPQ14764 893 aaKnown RBP11.61□□□□□ -0.55
LRTOMT-203ENST00000324866 ACEP12821 1306 aa11.61□□□□□ -0.55
LRTOMT-203ENST00000324866 IGHDP01880 384 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms