RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 C9orf84Q5VXU9 1444 aa15.1■□□□□ 0.01
FN1-201ENST00000323926 SLC52A1Q9NWF4 448 aa15.1■□□□□ 0.01
FN1-201ENST00000323926 OFD1O75665 1012 aa15.09■□□□□ 0.01
FN1-201ENST00000323926 FKBP5Q13451 457 aaPredicted RBP15.09■□□□□ 0.01
FN1-201ENST00000323926 CLASRPQ8N2M8 674 aaKnown RBP15.09■□□□□ 0.01
FN1-201ENST00000323926 CDKL5O76039 1030 aa15.09■□□□□ 0.01
FN1-201ENST00000323926 RIPK4P57078 832 aa15.09■□□□□ 0.01
FN1-201ENST00000323926 MEX3CQ5U5Q3 659 aaKnown RBP15.09■□□□□ 0.01
FN1-201ENST00000323926 PDE4AP27815 886 aa15.09■□□□□ 0.01
FN1-201ENST00000323926 SNAPC4Q5SXM2 1469 aa15.09■□□□□ 0.01
FN1-201ENST00000323926 RPGRIP1LQ68CZ1 1315 aa15.08■□□□□ 0.01
FN1-201ENST00000323926 RABEP1Q15276 862 aa15.08■□□□□ 0
FN1-201ENST00000323926 CFTRP13569 1480 aa15.08■□□□□ 0
FN1-201ENST00000323926 CDC45O75419 566 aa15.08■□□□□ 0
FN1-201ENST00000323926 UBTFL1P0CB47 393 aaPredicted RBP15.08■□□□□ 0
FN1-201ENST00000323926 GCC1Q96CN9 775 aa15.08■□□□□ 0
FN1-201ENST00000323926 ADGBQ8N7X0 1667 aa15.08■□□□□ 0
FN1-201ENST00000323926 CCDC146Q8IYE0 955 aa15.08■□□□□ 0
FN1-201ENST00000323926 ZNF287Q9HBT7 754 aa15.08■□□□□ 0
FN1-201ENST00000323926 AQRO60306 1485 aaKnown RBP eCLIP15.07■□□□□ 09e-12■■■■■ 26.9
FN1-201ENST00000323926 AEBP1Q8IUX7 1158 aa15.07■□□□□ 0
FN1-201ENST00000323926 CCT4P50991 539 aaKnown RBP15.07■□□□□ 0
FN1-201ENST00000323926 CCAR2Q8N163 923 aaKnown RBP15.07■□□□□ 0
FN1-201ENST00000323926 PDE3AQ14432 1141 aa15.06■□□□□ 0
FN1-201ENST00000323926 ZNHIT6Q9NWK9 470 aaKnown RBP15.06■□□□□ 0
FN1-201ENST00000323926 MAGEC2Q9UBF1 373 aaPredicted RBP15.06■□□□□ 0
FN1-201ENST00000323926 SYCP1Q15431 976 aa15.06■□□□□ 0
FN1-201ENST00000323926 CLUAP1Q96AJ1 413 aa15.06■□□□□ 0
FN1-201ENST00000323926 RTN4Q9NQC3 1192 aaKnown RBP15.06■□□□□ 0
FN1-201ENST00000323926 TSPYL4Q9UJ04 414 aa15.06■□□□□ 0
FN1-201ENST00000323926 CCDC66A2RUB6 948 aa15.05■□□□□ 0
FN1-201ENST00000323926 CCAR1Q8IX12 1150 aaKnown RBP15.05■□□□□ 0
FN1-201ENST00000323926 MNS1Q8NEH6 495 aa15.05■□□□□ 0
FN1-201ENST00000323926 LTV1Q96GA3 475 aaPredicted RBP15.05■□□□□ -0
FN1-201ENST00000323926 ATAD2Q6PL18 1390 aa15.05■□□□□ -0
FN1-201ENST00000323926 GOLGA6L7A0A1B0GV03 622 aa15.05■□□□□ -0
FN1-201ENST00000323926 PLEKHO1Q53GL0 409 aaPredicted RBP15.05■□□□□ -0
FN1-201ENST00000323926 NACAP1Q9BZK3 213 aa15.05■□□□□ -0
FN1-201ENST00000323926 KIAA1107Q9UPP5 1409 aa15.04■□□□□ -0
FN1-201ENST00000323926 GOLGA6L10A6NI86 522 aa15.04■□□□□ -0
FN1-201ENST00000323926 RIC3Q7Z5B4 369 aa15.04■□□□□ -0
FN1-201ENST00000323926 CDK5RAP3Q96JB5 506 aa15.04■□□□□ -0
FN1-201ENST00000323926 TRIM22Q8IYM9 498 aa15.03■□□□□ -0
FN1-201ENST00000323926 MRE11P49959 708 aa15.03■□□□□ -0
FN1-201ENST00000323926 KRT32Q14532 448 aa15.03■□□□□ -0
FN1-201ENST00000323926 PLEKHH1Q9ULM0 1364 aa15.02■□□□□ -0
FN1-201ENST00000323926 C22orf23Q9BZE7 217 aa15.02□□□□□ -0.01
FN1-201ENST00000323926 CFAP45Q9UL16 551 aa15.01□□□□□ -0.01
FN1-201ENST00000323926 MAGI1Q96QZ7 1491 aaPredicted RBP15.01□□□□□ -0.01
FN1-201ENST00000323926 SDF4Q9BRK5 362 aa15.01□□□□□ -0.01
FN1-201ENST00000323926 THEMISQ8N1K5 641 aaPredicted RBP15.01□□□□□ -0.01
FN1-201ENST00000323926 TROQ12816 1431 aaPredicted RBP15.01□□□□□ -0.01
FN1-201ENST00000323926 FAM43AQ8N2R8 423 aa15□□□□□ -0.01
FN1-201ENST00000323926 WASF1Q92558 559 aa15□□□□□ -0.01
FN1-201ENST00000323926 GNAI2P04899 355 aa15□□□□□ -0.01
FN1-201ENST00000323926 HSP90AB2PQ58FF8 381 aa15□□□□□ -0.01
FN1-201ENST00000323926 NASPP49321 788 aaPredicted RBP15□□□□□ -0.01
FN1-201ENST00000323926 ZNF771Q7L3S4 317 aaPredicted RBP15□□□□□ -0.01
FN1-201ENST00000323926 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15□□□□□ -0.01
FN1-201ENST00000323926 CBFA2T2O43439 604 aa14.99□□□□□ -0.01
FN1-201ENST00000323926 NAP1L1P55209 391 aaKnown RBP14.99□□□□□ -0.01
FN1-201ENST00000323926 KIF2AO00139 706 aaPredicted RBP14.99□□□□□ -0.01
FN1-201ENST00000323926 WDR63Q8IWG1 891 aa14.99□□□□□ -0.01
FN1-201ENST00000323926 CTNNA3Q9UI47 895 aa14.99□□□□□ -0.01
FN1-201ENST00000323926 SMC2O95347 1197 aa14.99□□□□□ -0.01
FN1-201ENST00000323926 MINK1Q8N4C8 1332 aaPredicted RBP14.99□□□□□ -0.01
FN1-201ENST00000323926 TOPBP1Q92547 1522 aa14.98□□□□□ -0.01
FN1-201ENST00000323926 CFAP43Q8NDM7 1665 aa14.98□□□□□ -0.01
FN1-201ENST00000323926 MCM3P25205 808 aa14.98□□□□□ -0.01
FN1-201ENST00000323926 CCDC158Q5M9N0 1113 aa14.98□□□□□ -0.01
FN1-201ENST00000323926 CFAP74Q9C0B2 1584 aa14.98□□□□□ -0.01
FN1-201ENST00000323926 EIF3JO75822 258 aaKnown RBP14.97□□□□□ -0.01
FN1-201ENST00000323926 FEZ1Q99689 392 aa14.97□□□□□ -0.01
FN1-201ENST00000323926 IFT57Q9NWB7 429 aa14.97□□□□□ -0.01
FN1-201ENST00000323926 EZRP15311 586 aaKnown RBP14.97□□□□□ -0.01
FN1-201ENST00000323926 CCDC192P0DO97 292 aa14.97□□□□□ -0.01
FN1-201ENST00000323926 CIZ1Q9ULV3 898 aaPredicted RBP14.96□□□□□ -0.01
FN1-201ENST00000323926 DHX29Q7Z478 1369 aaKnown RBP14.96□□□□□ -0.01
FN1-201ENST00000323926 VPS37CA5D8V6 355 aaPredicted RBP14.96□□□□□ -0.01
FN1-201ENST00000323926 CEP131Q9UPN4 1083 aa14.96□□□□□ -0.01
FN1-201ENST00000323926 AKNAQ7Z591 1439 aa14.96□□□□□ -0.01
FN1-201ENST00000323926 WDR33Q9C0J8 1336 aaKnown RBP14.96□□□□□ -0.01
FN1-201ENST00000323926 IGF1RP08069 1367 aa14.96□□□□□ -0.02
FN1-201ENST00000323926 NOL8Q76FK4 1167 aaKnown RBP14.96□□□□□ -0.02
FN1-201ENST00000323926 CRBNQ96SW2 442 aa14.96□□□□□ -0.02
FN1-201ENST00000323926 INCENPQ9NQS7 918 aa14.96□□□□□ -0.02
FN1-201ENST00000323926 EIF2S2P20042 333 aaKnown RBP14.95□□□□□ -0.02
FN1-201ENST00000323926 TAF3Q5VWG9 929 aa14.95□□□□□ -0.02
FN1-201ENST00000323926 USP8P40818 1118 aa14.95□□□□□ -0.02
FN1-201ENST00000323926 PPP1R12BO60237 982 aaPredicted RBP14.95□□□□□ -0.02
FN1-201ENST00000323926 DEF6Q9H4E7 631 aa14.95□□□□□ -0.02
FN1-201ENST00000323926 BMP2KQ9NSY1 1161 aaPredicted RBP14.95□□□□□ -0.02
FN1-201ENST00000323926 ABCC11Q96J66 1382 aa14.95□□□□□ -0.02
FN1-201ENST00000323926 SPG7Q9UQ90 795 aa14.94□□□□□ -0.02
FN1-201ENST00000323926 ERLIN1O75477 346 aa14.94□□□□□ -0.02
FN1-201ENST00000323926 NOL7Q9UMY1 257 aaKnown RBP14.94□□□□□ -0.02
FN1-201ENST00000323926 APAF1O14727 1248 aa14.94□□□□□ -0.02
FN1-201ENST00000323926 PCF11O94913 1555 aaKnown RBP14.94□□□□□ -0.02
FN1-201ENST00000323926 ZNF652Q9Y2D9 606 aa14.93□□□□□ -0.02
FN1-201ENST00000323926 COG6Q9Y2V7 657 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms