RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 PES1O00541 588 aaKnown RBP8.42□□□□□ -1.06
SMC1A-201ENST00000322213 C14orf37Q86TY3 774 aa8.42□□□□□ -1.06
SMC1A-201ENST00000322213 TXLNBQ8N3L3 684 aa8.42□□□□□ -1.06
SMC1A-201ENST00000322213 LNPKQ9C0E8 428 aa8.42□□□□□ -1.06
SMC1A-201ENST00000322213 VPS37CA5D8V6 355 aaPredicted RBP8.42□□□□□ -1.06
SMC1A-201ENST00000322213 PAXBP1Q9Y5B6 917 aa8.42□□□□□ -1.06
SMC1A-201ENST00000322213 IQCEQ6IPM2 695 aa8.42□□□□□ -1.06
SMC1A-201ENST00000322213 GIMAP7Q8NHV1 300 aa8.42□□□□□ -1.06
SMC1A-201ENST00000322213 RRP12Q5JTH9 1297 aaKnown RBP8.42□□□□□ -1.06
SMC1A-201ENST00000322213 KRT222Q8N1A0 295 aa8.42□□□□□ -1.06
SMC1A-201ENST00000322213 CCDC141Q6ZP82 1450 aa8.41□□□□□ -1.06
SMC1A-201ENST00000322213 XRCC6P12956 609 aaKnown RBP eCLIP8.41□□□□□ -1.06
SMC1A-201ENST00000322213 LRPPRCP42704 1394 aaKnown RBP8.41□□□□□ -1.06
SMC1A-201ENST00000322213 KIF18AQ8NI77 898 aa8.41□□□□□ -1.06
SMC1A-201ENST00000322213 ANO2Q9NQ90 1003 aa8.41□□□□□ -1.06
SMC1A-201ENST00000322213 APAF1O14727 1248 aa8.41□□□□□ -1.06
SMC1A-201ENST00000322213 DMTNQ08495 405 aa8.41□□□□□ -1.06
SMC1A-201ENST00000322213 CCDC183Q5T5S1 534 aa8.41□□□□□ -1.06
SMC1A-201ENST00000322213 BCCIPQ9P287 314 aaKnown RBP eCLIP8.41□□□□□ -1.06
SMC1A-201ENST00000322213 OLFM4Q6UX06 510 aa8.41□□□□□ -1.06
SMC1A-201ENST00000322213 CAGE1Q8TC20 777 aa8.41□□□□□ -1.06
SMC1A-201ENST00000322213 NINQ8N4C6 2090 aa8.41□□□□□ -1.06
SMC1A-201ENST00000322213 GOLGA6L10A6NI86 522 aa8.4□□□□□ -1.06
SMC1A-201ENST00000322213 GTF2A1P52655 376 aaPredicted RBP8.4□□□□□ -1.06
SMC1A-201ENST00000322213 UTP14CQ5TAP6 766 aaKnown RBP8.4□□□□□ -1.06
SMC1A-201ENST00000322213 NOL10Q9BSC4 688 aaKnown RBP8.4□□□□□ -1.06
SMC1A-201ENST00000322213 TNMDQ9H2S6 317 aa8.4□□□□□ -1.06
SMC1A-201ENST00000322213 IQGAP2Q13576 1575 aa8.4□□□□□ -1.06
SMC1A-201ENST00000322213 SMC2O95347 1197 aa8.4□□□□□ -1.06
SMC1A-201ENST00000322213 HSP90AB3PQ58FF7 597 aa8.4□□□□□ -1.06
SMC1A-201ENST00000322213 WWC1Q8IX03 1113 aa8.4□□□□□ -1.06
SMC1A-201ENST00000322213 CHD4Q14839 1912 aa8.4□□□□□ -1.06
SMC1A-201ENST00000322213 ERBINQ96RT1 1412 aa8.4□□□□□ -1.06
SMC1A-201ENST00000322213 KIAA1107Q9UPP5 1409 aa8.4□□□□□ -1.06
SMC1A-201ENST00000322213 CREBRFQ8IUR6 639 aa8.4□□□□□ -1.06
SMC1A-201ENST00000322213 MYO6Q9UM54 1294 aa8.4□□□□□ -1.06
SMC1A-201ENST00000322213 GCC1Q96CN9 775 aa8.4□□□□□ -1.06
SMC1A-201ENST00000322213 GOLGA6L7A0A1B0GV03 622 aa8.4□□□□□ -1.07
SMC1A-201ENST00000322213 TNPO1Q92973 898 aaKnown RBP8.4□□□□□ -1.07
SMC1A-201ENST00000322213 INCENPQ9NQS7 918 aa8.4□□□□□ -1.07
SMC1A-201ENST00000322213 PDZRN3Q9UPQ7 1066 aa8.4□□□□□ -1.07
SMC1A-201ENST00000322213 DNMT1P26358 1616 aaKnown RBP8.39□□□□□ -1.07
SMC1A-201ENST00000322213 VGLL3A8MV65 326 aa8.39□□□□□ -1.07
SMC1A-201ENST00000322213 CROCCQ5TZA2 2017 aa8.39□□□□□ -1.07
SMC1A-201ENST00000322213 TMCO3Q6UWJ1 677 aa8.39□□□□□ -1.07
SMC1A-201ENST00000322213 TBC1D2Q9BYX2 928 aa8.39□□□□□ -1.07
SMC1A-201ENST00000322213 RRAGDQ9NQL2 400 aaPredicted RBP8.39□□□□□ -1.07
SMC1A-201ENST00000322213 NCAPD3P42695 1498 aa8.39□□□□□ -1.07
SMC1A-201ENST00000322213 OFD1O75665 1012 aa8.39□□□□□ -1.07
SMC1A-201ENST00000322213 SSR1P43307 286 aaKnown RBP8.39□□□□□ -1.07
SMC1A-201ENST00000322213 GORABQ5T7V8 394 aa8.39□□□□□ -1.07
SMC1A-201ENST00000322213 CDCA7LQ96GN5 454 aa8.39□□□□□ -1.07
SMC1A-201ENST00000322213 SLC4A10Q6U841 1118 aa8.39□□□□□ -1.07
SMC1A-201ENST00000322213 PRXQ9BXM0 1461 aa8.39□□□□□ -1.07
SMC1A-201ENST00000322213 IVLP07476 585 aa8.39□□□□□ -1.07
SMC1A-201ENST00000322213 PSMA5P28066 241 aa8.39□□□□□ -1.07
SMC1A-201ENST00000322213 TBC1D32Q96NH3 1257 aa8.39□□□□□ -1.07
SMC1A-201ENST00000322213 MCM3P25205 808 aa8.38□□□□□ -1.07
SMC1A-201ENST00000322213 RPRD2Q5VT52 1461 aaKnown RBP8.38□□□□□ -1.07
SMC1A-201ENST00000322213 KLHL40Q2TBA0 621 aa8.38□□□□□ -1.07
SMC1A-201ENST00000322213 MAP9Q49MG5 647 aa8.38□□□□□ -1.07
SMC1A-201ENST00000322213 RSPH4AQ5TD94 716 aa8.38□□□□□ -1.07
SMC1A-201ENST00000322213 LRRFIP1Q32MZ4 808 aaKnown RBP8.38□□□□□ -1.07
SMC1A-201ENST00000322213 LRRCC1Q9C099 1032 aa8.38□□□□□ -1.07
SMC1A-201ENST00000322213 ADAMTS8Q9UP79 889 aa8.38□□□□□ -1.07
SMC1A-201ENST00000322213 PTPN14Q15678 1187 aa8.38□□□□□ -1.07
SMC1A-201ENST00000322213 RBM25P49756 843 aaKnown RBP8.38□□□□□ -1.07
SMC1A-201ENST00000322213 MVPQ14764 893 aaKnown RBP8.38□□□□□ -1.07
SMC1A-201ENST00000322213 RASSF8Q8NHQ8 419 aa8.38□□□□□ -1.07
SMC1A-201ENST00000322213 ASXL1Q8IXJ9 1541 aa8.38□□□□□ -1.07
SMC1A-201ENST00000322213 ERC2O15083 957 aa8.37□□□□□ -1.07
SMC1A-201ENST00000322213 FIBPO43427 364 aa8.37□□□□□ -1.07
SMC1A-201ENST00000322213 SMARCE1Q969G3 411 aa8.37□□□□□ -1.07
SMC1A-201ENST00000322213 ATAD2BQ9ULI0 1458 aa8.37□□□□□ -1.07
SMC1A-201ENST00000322213 ZSCAN23Q3MJ62 389 aa8.37□□□□□ -1.07
SMC1A-201ENST00000322213 NAIPQ13075 1403 aa8.37□□□□□ -1.07
SMC1A-201ENST00000322213 NEMFO60524 1076 aa8.37□□□□□ -1.07
SMC1A-201ENST00000322213 MYH7BA7E2Y1 1941 aa8.37□□□□□ -1.07
SMC1A-201ENST00000322213 API5Q9BZZ5 524 aaKnown RBP8.37□□□□□ -1.07
SMC1A-201ENST00000322213 UBXN4Q92575 508 aa8.37□□□□□ -1.07
SMC1A-201ENST00000322213 FEZ1Q99689 392 aa8.37□□□□□ -1.07
SMC1A-201ENST00000322213 SPDYE4A6NLX3 237 aa8.37□□□□□ -1.07
SMC1A-201ENST00000322213 NEK4P51957 841 aa8.37□□□□□ -1.07
SMC1A-201ENST00000322213 CROCC2H7BZ55 1655 aa8.37□□□□□ -1.07
SMC1A-201ENST00000322213 TEX2Q8IWB9 1127 aa8.36□□□□□ -1.07
SMC1A-201ENST00000322213 GPATCH11Q8N954 259 aa8.36□□□□□ -1.07
SMC1A-201ENST00000322213 FILIP1Q7Z7B0 1213 aa8.36□□□□□ -1.07
SMC1A-201ENST00000322213 C16orf45Q96MC5 204 aaPredicted RBP8.36□□□□□ -1.07
SMC1A-201ENST00000322213 KDM5CP41229 1560 aa8.36□□□□□ -1.07
SMC1A-201ENST00000322213 NPHP1O15259 732 aa8.36□□□□□ -1.07
SMC1A-201ENST00000322213 CHD1LQ86WJ1 897 aa8.36□□□□□ -1.07
SMC1A-201ENST00000322213 EVC2Q86UK5 1308 aa8.36□□□□□ -1.07
SMC1A-201ENST00000322213 DNMBPQ6XZF7 1577 aa8.36□□□□□ -1.07
SMC1A-201ENST00000322213 CBFA2T2O43439 604 aa8.36□□□□□ -1.07
SMC1A-201ENST00000322213 KRT85P78386 507 aa8.36□□□□□ -1.07
SMC1A-201ENST00000322213 MAP3K11Q16584 847 aa8.36□□□□□ -1.07
SMC1A-201ENST00000322213 PDILTQ8N807 584 aa8.36□□□□□ -1.07
SMC1A-201ENST00000322213 PANK2Q9BZ23 570 aa8.36□□□□□ -1.07
SMC1A-201ENST00000322213 ARHGAP5Q13017 1502 aa8.35□□□□□ -1.07
SMC1A-201ENST00000322213 DYDC1Q8WWB3 177 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms