RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 TRAK2O60296 914 aa10.65□□□□□ -0.7
SSBP2-201ENST00000320672 DHX8Q14562 1220 aaKnown RBP10.65□□□□□ -0.71
SSBP2-201ENST00000320672 CT47A1Q5JQC4 288 aaPredicted RBP10.65□□□□□ -0.71
SSBP2-201ENST00000320672 TWISTNBQ3B726 338 aaPredicted RBP10.64□□□□□ -0.71
SSBP2-201ENST00000320672 ZBED9Q6R2W3 1325 aa10.64□□□□□ -0.71
SSBP2-201ENST00000320672 CPLX2Q6PUV4 134 aaKnown RBP10.64□□□□□ -0.71
SSBP2-201ENST00000320672 TPM1P09493 284 aa10.64□□□□□ -0.71
SSBP2-201ENST00000320672 PPP2R1AP30153 589 aa10.64□□□□□ -0.71
SSBP2-201ENST00000320672 TRIM5Q9C035 493 aa10.64□□□□□ -0.71
SSBP2-201ENST00000320672 CAMK4Q16566 473 aa10.64□□□□□ -0.71
SSBP2-201ENST00000320672 REC8O95072 547 aa10.64□□□□□ -0.71
SSBP2-201ENST00000320672 TTC39AQ5SRH9 613 aa10.64□□□□□ -0.71
SSBP2-201ENST00000320672 CWC27Q6UX04 472 aaKnown RBP10.64□□□□□ -0.71
SSBP2-201ENST00000320672 FERMT3Q86UX7 667 aa10.64□□□□□ -0.71
SSBP2-201ENST00000320672 KRI1Q8N9T8 703 aaKnown RBP10.64□□□□□ -0.71
SSBP2-201ENST00000320672 PROSER2Q86WR7 435 aaPredicted RBP10.63□□□□□ -0.71
SSBP2-201ENST00000320672 PTCD1O75127 700 aaKnown RBP10.63□□□□□ -0.71
SSBP2-201ENST00000320672 KIF3AQ9Y496 699 aa10.63□□□□□ -0.71
SSBP2-201ENST00000320672 C20orf194Q5TEA3 1177 aa10.63□□□□□ -0.71
SSBP2-201ENST00000320672 CCDC73Q6ZRK6 1079 aa10.63□□□□□ -0.71
SSBP2-201ENST00000320672 MNS1Q8NEH6 495 aa10.63□□□□□ -0.71
SSBP2-201ENST00000320672 FAM193AP78312 1265 aa10.63□□□□□ -0.71
SSBP2-201ENST00000320672 FAM43AQ8N2R8 423 aa10.63□□□□□ -0.71
SSBP2-201ENST00000320672 DTNBO60941 627 aa10.63□□□□□ -0.71
SSBP2-201ENST00000320672 HSP90AB2PQ58FF8 381 aa10.63□□□□□ -0.71
SSBP2-201ENST00000320672 TSHZ3Q63HK5 1081 aa10.63□□□□□ -0.71
SSBP2-201ENST00000320672 SSBP05455 408 aaKnown RBP eCLIP10.62□□□□□ -0.71
SSBP2-201ENST00000320672 CAGE1Q8TC20 777 aa10.62□□□□□ -0.71
SSBP2-201ENST00000320672 TOM1L2Q6ZVM7 507 aa10.62□□□□□ -0.71
SSBP2-201ENST00000320672 MYCNP04198 464 aaPredicted RBP10.62□□□□□ -0.71
SSBP2-201ENST00000320672 MCM10Q7L590 875 aa10.62□□□□□ -0.71
SSBP2-201ENST00000320672 PRDM10Q9NQV6 1147 aa10.62□□□□□ -0.71
SSBP2-201ENST00000320672 TTC16Q8NEE8 873 aa10.61□□□□□ -0.71
SSBP2-201ENST00000320672 PTPRGP23470 1445 aa10.61□□□□□ -0.71
SSBP2-201ENST00000320672 CDC45O75419 566 aa10.61□□□□□ -0.71
SSBP2-201ENST00000320672 NASPP49321 788 aaPredicted RBP10.61□□□□□ -0.71
SSBP2-201ENST00000320672 GNAI1P63096 354 aa10.61□□□□□ -0.71
SSBP2-201ENST00000320672 DNA2P51530 1060 aa10.61□□□□□ -0.71
SSBP2-201ENST00000320672 WAPLQ7Z5K2 1190 aa10.61□□□□□ -0.71
SSBP2-201ENST00000320672 CCDC7Q96M83 1385 aa10.61□□□□□ -0.71
SSBP2-201ENST00000320672 CDK19Q9BWU1 502 aa10.61□□□□□ -0.71
SSBP2-201ENST00000320672 RAD54L2Q9Y4B4 1467 aa10.61□□□□□ -0.71
SSBP2-201ENST00000320672 F6X3S4 739 aa10.61□□□□□ -0.71
SSBP2-201ENST00000320672 ENOX2Q16206 610 aaKnown RBP10.61□□□□□ -0.71
SSBP2-201ENST00000320672 EXOC6BQ9Y2D4 811 aa10.61□□□□□ -0.71
SSBP2-201ENST00000320672 OFD1O75665 1012 aa10.61□□□□□ -0.71
SSBP2-201ENST00000320672 RAPGEF3O95398 923 aa10.61□□□□□ -0.71
SSBP2-201ENST00000320672 USP5P45974 858 aa10.6□□□□□ -0.71
SSBP2-201ENST00000320672 PAF1Q8N7H5 531 aa10.6□□□□□ -0.71
SSBP2-201ENST00000320672 HDAC5Q9UQL6 1122 aa10.6□□□□□ -0.71
SSBP2-201ENST00000320672 EPS15P42566 896 aa10.6□□□□□ -0.71
SSBP2-201ENST00000320672 RNF20Q5VTR2 975 aa10.6□□□□□ -0.71
SSBP2-201ENST00000320672 ZSCAN29Q8IWY8 852 aaPredicted RBP10.6□□□□□ -0.71
SSBP2-201ENST00000320672 IPO7O95373 1038 aaKnown RBP10.6□□□□□ -0.71
SSBP2-201ENST00000320672 PHLDB1Q86UU1 1377 aa10.59□□□□□ -0.71
SSBP2-201ENST00000320672 HDGFL1Q5TGJ6 251 aa10.59□□□□□ -0.71
SSBP2-201ENST00000320672 ISM2Q6H9L7 571 aa10.59□□□□□ -0.71
SSBP2-201ENST00000320672 TRERF1Q96PN7 1200 aa10.59□□□□□ -0.71
SSBP2-201ENST00000320672 PIP4K2AP48426 406 aaPredicted RBP10.59□□□□□ -0.71
SSBP2-201ENST00000320672 CABP4P57796 275 aa10.59□□□□□ -0.71
SSBP2-201ENST00000320672 SAFBQ15424 915 aaKnown RBP eCLIP10.59□□□□□ -0.71
SSBP2-201ENST00000320672 TANGO6Q9C0B7 1094 aa10.59□□□□□ -0.71
SSBP2-201ENST00000320672 ODF2Q5BJF6 829 aa10.59□□□□□ -0.71
SSBP2-201ENST00000320672 SEPT11Q9NVA2 429 aaKnown RBP10.59□□□□□ -0.71
SSBP2-201ENST00000320672 ADAMTS2O95450 1211 aa10.59□□□□□ -0.71
SSBP2-201ENST00000320672 ATP6V1DQ9Y5K8 247 aa10.59□□□□□ -0.71
SSBP2-201ENST00000320672 KRT18P05783 430 aaKnown RBP10.59□□□□□ -0.71
SSBP2-201ENST00000320672 CNTROBQ8N137 903 aa10.59□□□□□ -0.71
SSBP2-201ENST00000320672 GDPD2Q9HCC8 539 aa10.59□□□□□ -0.71
SSBP2-201ENST00000320672 ANXA1P04083 346 aa10.58□□□□□ -0.72
SSBP2-201ENST00000320672 CLASRPQ8N2M8 674 aaKnown RBP10.58□□□□□ -0.72
SSBP2-201ENST00000320672 UPF3BQ9BZI7 483 aaKnown RBP10.58□□□□□ -0.72
SSBP2-201ENST00000320672 CCDC18Q5T9S5 1454 aa10.58□□□□□ -0.72
SSBP2-201ENST00000320672 TOP2AP11388 1531 aaKnown RBP10.58□□□□□ -0.72
SSBP2-201ENST00000320672 CCDC47Q96A33 483 aaKnown RBP10.58□□□□□ -0.72
SSBP2-201ENST00000320672 CENPHQ9H3R5 247 aa10.58□□□□□ -0.72
SSBP2-201ENST00000320672 AACSQ86V21 672 aa10.58□□□□□ -0.72
SSBP2-201ENST00000320672 SMARCA2P51531 1590 aa10.58□□□□□ -0.72
SSBP2-201ENST00000320672 SKOR2Q2VWA4 1001 aaPredicted RBP10.58□□□□□ -0.72
SSBP2-201ENST00000320672 ERC2O15083 957 aa10.57□□□□□ -0.72
SSBP2-201ENST00000320672 CCDC144CPQ8IYA2 1237 aa10.57□□□□□ -0.72
SSBP2-201ENST00000320672 ZFP91Q96JP5 570 aaPredicted RBP10.57□□□□□ -0.72
SSBP2-201ENST00000320672 ANKRD62A6NC57 917 aa10.57□□□□□ -0.72
SSBP2-201ENST00000320672 ZNF530Q6P9A1 599 aaPredicted RBP10.57□□□□□ -0.72
SSBP2-201ENST00000320672 ABCF2Q9UG63 623 aa10.57□□□□□ -0.72
SSBP2-201ENST00000320672 OLFM4Q6UX06 510 aa10.57□□□□□ -0.72
SSBP2-201ENST00000320672 FILIP1Q7Z7B0 1213 aa10.57□□□□□ -0.72
SSBP2-201ENST00000320672 STK38Q15208 465 aa10.56□□□□□ -0.72
SSBP2-201ENST00000320672 CCDC8Q9H0W5 538 aaPredicted RBP10.56□□□□□ -0.72
SSBP2-201ENST00000320672 LIG1P18858 919 aa10.56□□□□□ -0.72
SSBP2-201ENST00000320672 ERICH4A6NGS2 130 aa10.56□□□□□ -0.72
SSBP2-201ENST00000320672 JAKMIP1Q96N16 626 aaKnown RBP10.56□□□□□ -0.72
SSBP2-201ENST00000320672 AQRO60306 1485 aaKnown RBP eCLIP10.56□□□□□ -0.72
SSBP2-201ENST00000320672 IDH1O75874 414 aaKnown RBP10.56□□□□□ -0.72
SSBP2-201ENST00000320672 TAF3Q5VWG9 929 aa10.56□□□□□ -0.72
SSBP2-201ENST00000320672 CEBPAP49715 358 aaPredicted RBP10.56□□□□□ -0.72
SSBP2-201ENST00000320672 RUFY1Q96T51 708 aa10.56□□□□□ -0.72
SSBP2-201ENST00000320672 RSPH6AQ9H0K4 717 aa10.56□□□□□ -0.72
SSBP2-201ENST00000320672 ANKRD20A12PQ8NF67 263 aa10.55□□□□□ -0.72
SSBP2-201ENST00000320672 SERPINC1P01008 464 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms