RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 BCL2L13Q9BXK5 485 aa26.64■■□□□ 1.85
CPNE7-202ENST00000319518 METP08581 1390 aa26.63■■□□□ 1.85
CPNE7-202ENST00000319518 ATAD2Q6PL18 1390 aa26.63■■□□□ 1.85
CPNE7-202ENST00000319518 CD163L1Q9NR16 1453 aa26.63■■□□□ 1.85
CPNE7-202ENST00000319518 MAPK8IP3Q9UPT6 1336 aa26.63■■□□□ 1.85
CPNE7-202ENST00000319518 CABP1Q9NZU7 370 aa26.63■■□□□ 1.85
CPNE7-202ENST00000319518 NLRP1Q9C000 1473 aa26.62■■□□□ 1.85
CPNE7-202ENST00000319518 CCDC27Q2M243 656 aa26.61■■□□□ 1.85
CPNE7-202ENST00000319518 TNRQ92752 1358 aa26.61■■□□□ 1.85
CPNE7-202ENST00000319518 ABCC11Q96J66 1382 aa26.61■■□□□ 1.85
CPNE7-202ENST00000319518 NRXN3Q9Y4C0 1643 aa26.61■■□□□ 1.85
CPNE7-202ENST00000319518 FRAT2O75474 233 aaPredicted RBP26.61■■□□□ 1.85
CPNE7-202ENST00000319518 CEBPAP49715 358 aaPredicted RBP26.6■■□□□ 1.85
CPNE7-202ENST00000319518 PLPPR3Q6T4P5 718 aa26.6■■□□□ 1.85
CPNE7-202ENST00000319518 TXNDC2Q86VQ3 553 aa26.59■■□□□ 1.85
CPNE7-202ENST00000319518 TERF2IPQ9NYB0 399 aa26.59■■□□□ 1.85
CPNE7-202ENST00000319518 NSD2O96028 1365 aa26.58■■□□□ 1.85
CPNE7-202ENST00000319518 FYB1O15117 783 aa26.58■■□□□ 1.85
CPNE7-202ENST00000319518 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.56■■□□□ 1.84
CPNE7-202ENST00000319518 CFAP53Q96M91 514 aa26.56■■□□□ 1.84
CPNE7-202ENST00000319518 ADGRB2O60241 1585 aa26.55■■□□□ 1.84
CPNE7-202ENST00000319518 PMFBP1Q8TBY8 1022 aa26.55■■□□□ 1.84
CPNE7-202ENST00000319518 DLC1Q96QB1 1528 aa26.54■■□□□ 1.84
CPNE7-202ENST00000319518 RTN4Q9NQC3 1192 aaKnown RBP26.54■■□□□ 1.84
CPNE7-202ENST00000319518 HDGFL2Q7Z4V5 671 aaPredicted RBP26.53■■□□□ 1.84
CPNE7-202ENST00000319518 U2AF1L5P0DN76 240 aaPredicted RBP26.53■■□□□ 1.84
CPNE7-202ENST00000319518 U2AF1Q01081 240 aaKnown RBP eCLIP26.53■■□□□ 1.84
CPNE7-202ENST00000319518 AAMPQ13685 434 aa26.53■■□□□ 1.84
CPNE7-202ENST00000319518 PDZRN3Q9UPQ7 1066 aa26.53■■□□□ 1.84
CPNE7-202ENST00000319518 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.52■■□□□ 1.84
CPNE7-202ENST00000319518 BRPF3Q9ULD4 1205 aa26.52■■□□□ 1.84
CPNE7-202ENST00000319518 NCBP3Q53F19 620 aaKnown RBP26.5■■□□□ 1.83
CPNE7-202ENST00000319518 NCKAP5LQ9HCH0 1330 aa26.5■■□□□ 1.83
CPNE7-202ENST00000319518 FBLN1P23142 703 aa26.5■■□□□ 1.83
CPNE7-202ENST00000319518 TMEM2Q9UHN6 1383 aa26.5■■□□□ 1.83
CPNE7-202ENST00000319518 UBR1Q8IWV7 1749 aa26.5■■□□□ 1.83
CPNE7-202ENST00000319518 MYH16Q9H6N6 1097 aa26.49■■□□□ 1.83
CPNE7-202ENST00000319518 TSR2Q969E8 191 aaKnown RBP26.47■■□□□ 1.83
CPNE7-202ENST00000319518 LTKP29376 864 aa26.47■■□□□ 1.83
CPNE7-202ENST00000319518 MVPQ14764 893 aaKnown RBP26.47■■□□□ 1.83
CPNE7-202ENST00000319518 WASLO00401 505 aaPredicted RBP26.46■■□□□ 1.83
CPNE7-202ENST00000319518 PLEKHF1Q96S99 279 aa26.46■■□□□ 1.83
CPNE7-202ENST00000319518 U2SURPO15042 1029 aaKnown RBP26.46■■□□□ 1.83
CPNE7-202ENST00000319518 HDGFP51858 240 aaKnown RBP26.45■■□□□ 1.82
CPNE7-202ENST00000319518 COL3A1P02461 1466 aaPredicted RBP26.45■■□□□ 1.82
CPNE7-202ENST00000319518 TRHP20396 242 aaPredicted RBP26.44■■□□□ 1.82
CPNE7-202ENST00000319518 TBC1D32Q96NH3 1257 aa26.43■■□□□ 1.82
CPNE7-202ENST00000319518 RWDD1Q9H446 243 aaPredicted RBP26.43■■□□□ 1.82
CPNE7-202ENST00000319518 TRIM35Q9UPQ4 493 aa26.43■■□□□ 1.82
CPNE7-202ENST00000319518 ANKRD26Q9UPS8 1709 aa26.42■■□□□ 1.82
CPNE7-202ENST00000319518 ZKSCAN2Q63HK3 967 aa26.42■■□□□ 1.82
CPNE7-202ENST00000319518 PPIP5K1Q6PFW1 1433 aa26.41■■□□□ 1.82
CPNE7-202ENST00000319518 EXOSC9Q06265 439 aaKnown RBP26.4■■□□□ 1.82
CPNE7-202ENST00000319518 DZIP1LQ8IYY4 767 aaKnown RBP26.4■■□□□ 1.82
CPNE7-202ENST00000319518 ADAMTS13Q76LX8 1427 aa26.4■■□□□ 1.82
CPNE7-202ENST00000319518 ROBO2Q9HCK4 1378 aa26.4■■□□□ 1.82
CPNE7-202ENST00000319518 TMPOP42166 694 aaKnown RBP26.4■■□□□ 1.82
CPNE7-202ENST00000319518 SLC26A8Q96RN1 970 aa26.4■■□□□ 1.82
CPNE7-202ENST00000319518 ANTXR1Q9H6X2 564 aa26.4■■□□□ 1.82
CPNE7-202ENST00000319518 KIF20BQ96Q89 1820 aa26.4■■□□□ 1.82
CPNE7-202ENST00000319518 NUDT16Q96DE0 195 aaKnown RBP26.39■■□□□ 1.82
CPNE7-202ENST00000319518 SLKQ9H2G2 1235 aaPredicted RBP26.39■■□□□ 1.82
CPNE7-202ENST00000319518 ZRANB1Q9UGI0 708 aa26.39■■□□□ 1.82
CPNE7-202ENST00000319518 MED14O60244 1454 aa26.39■■□□□ 1.82
CPNE7-202ENST00000319518 BECN1Q14457 450 aa26.39■■□□□ 1.81
CPNE7-202ENST00000319518 TRIM27P14373 513 aa26.38■■□□□ 1.81
CPNE7-202ENST00000319518 ATP7BP35670 1465 aa26.38■■□□□ 1.81
CPNE7-202ENST00000319518 FTSJ3Q8IY81 847 aaKnown RBP26.37■■□□□ 1.81
CPNE7-202ENST00000319518 CT47B1P0C2W7 299 aaPredicted RBP26.37■■□□□ 1.81
CPNE7-202ENST00000319518 NME9Q86XW9 330 aa26.37■■□□□ 1.81
CPNE7-202ENST00000319518 SSH1Q8WYL5 1049 aa26.37■■□□□ 1.81
CPNE7-202ENST00000319518 SMC4Q9NTJ3 1288 aa26.36■■□□□ 1.81
CPNE7-202ENST00000319518 TECPR2O15040 1411 aa26.36■■□□□ 1.81
CPNE7-202ENST00000319518 NUTM2FA1L443 756 aa26.36■■□□□ 1.81
CPNE7-202ENST00000319518 TBC1D2Q9BYX2 928 aa26.35■■□□□ 1.81
CPNE7-202ENST00000319518 C3P01024 1663 aa26.35■■□□□ 1.81
CPNE7-202ENST00000319518 FAM135BQ49AJ0 1406 aa26.35■■□□□ 1.81
CPNE7-202ENST00000319518 KNDC1Q76NI1 1749 aa26.35■■□□□ 1.81
CPNE7-202ENST00000319518 PRR36Q9H6K5 1346 aa26.34■■□□□ 1.81
CPNE7-202ENST00000319518 CPS1P31327 1500 aa26.34■■□□□ 1.81
CPNE7-202ENST00000319518 CPSF1Q10570 1443 aaKnown RBP26.33■■□□□ 1.81
CPNE7-202ENST00000319518 DIAPH1O60610 1272 aaKnown RBP26.33■■□□□ 1.8
CPNE7-202ENST00000319518 POLKQ9UBT6 870 aa26.33■■□□□ 1.8
CPNE7-202ENST00000319518 UPF2Q9HAU5 1272 aaKnown RBP26.32■■□□□ 1.8
CPNE7-202ENST00000319518 CCDC61Q9Y6R9 512 aa26.31■■□□□ 1.8
CPNE7-202ENST00000319518 PLEKHG1Q9ULL1 1385 aa26.31■■□□□ 1.8
CPNE7-202ENST00000319518 SIRT1Q96EB6 747 aa26.31■■□□□ 1.8
CPNE7-202ENST00000319518 ATF7IPQ6VMQ6 1270 aa26.3■■□□□ 1.8
CPNE7-202ENST00000319518 HDAC1Q13547 482 aaPredicted RBP26.3■■□□□ 1.8
CPNE7-202ENST00000319518 ANO8Q9HCE9 1232 aaPredicted RBP26.29■■□□□ 1.8
CPNE7-202ENST00000319518 NOB1Q9ULX3 412 aaKnown RBP26.29■■□□□ 1.8
CPNE7-202ENST00000319518 EMILIN1Q9Y6C2 1016 aa26.29■■□□□ 1.8
CPNE7-202ENST00000319518 PNPLA6Q8IY17 1366 aa26.29■■□□□ 1.8
CPNE7-202ENST00000319518 PTPRUQ92729 1446 aa26.29■■□□□ 1.8
CPNE7-202ENST00000319518 FER1L4A9Z1Z3 1794 aa26.29■■□□□ 1.8
CPNE7-202ENST00000319518 ITPRIPQ8IWB1 547 aa26.28■■□□□ 1.8
CPNE7-202ENST00000319518 EDC4Q6P2E9 1401 aaKnown RBP26.28■■□□□ 1.8
CPNE7-202ENST00000319518 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.27■■□□□ 1.8
CPNE7-202ENST00000319518 IL16Q14005 1332 aa26.27■■□□□ 1.8
CPNE7-202ENST00000319518 EID1Q9Y6B2 187 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms