RNA–Protein interactions for RNA: ENST00000318129.5

GINS3-201, Transcript of GINS complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GINS3, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-201ENST00000318129 EDC4Q6P2E9 1401 aaKnown RBP13.59□□□□□ -0.23
GINS3-201ENST00000318129 NGDNQ8NEJ9 315 aaKnown RBP13.59□□□□□ -0.23
GINS3-201ENST00000318129 POLR3AO14802 1390 aaPredicted RBP13.58□□□□□ -0.23
GINS3-201ENST00000318129 RGPD8O14715 1765 aaPredicted RBP13.58□□□□□ -0.24
GINS3-201ENST00000318129 PHF8Q9UPP1 1060 aa13.57□□□□□ -0.24
GINS3-201ENST00000318129 MON2Q7Z3U7 1717 aa13.57□□□□□ -0.24
GINS3-201ENST00000318129 BRD4O60885 1362 aaPredicted RBP13.57□□□□□ -0.24
GINS3-201ENST00000318129 MORC1Q86VD1 984 aa13.57□□□□□ -0.24
GINS3-201ENST00000318129 XIRP1Q702N8 1843 aaKnown RBP13.56□□□□□ -0.24
GINS3-201ENST00000318129 NLRP13Q86W25 1043 aa13.56□□□□□ -0.24
GINS3-201ENST00000318129 PMFBP1Q8TBY8 1022 aa13.56□□□□□ -0.24
GINS3-201ENST00000318129 UBE2Q2Q8WVN8 375 aa13.56□□□□□ -0.24
GINS3-201ENST00000318129 NOP58Q9Y2X3 529 aaKnown RBP13.56□□□□□ -0.24
GINS3-201ENST00000318129 ESCO1Q5FWF5 840 aa13.56□□□□□ -0.24
GINS3-201ENST00000318129 USP6P35125 1406 aa13.55□□□□□ -0.24
GINS3-201ENST00000318129 FYB1O15117 783 aa13.55□□□□□ -0.24
GINS3-201ENST00000318129 C1orf167Q5SNV9 1468 aa13.55□□□□□ -0.24
GINS3-201ENST00000318129 TTC21AQ8NDW8 1320 aa13.54□□□□□ -0.24
GINS3-201ENST00000318129 NBR1Q14596 966 aa13.54□□□□□ -0.24
GINS3-201ENST00000318129 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.54□□□□□ -0.24
GINS3-201ENST00000318129 MRS2Q9HD23 443 aa13.54□□□□□ -0.24
GINS3-201ENST00000318129 MST1RQ04912 1400 aa13.54□□□□□ -0.24
GINS3-201ENST00000318129 TTC21BQ7Z4L5 1316 aa13.54□□□□□ -0.24
GINS3-201ENST00000318129 KIF20BQ96Q89 1820 aa13.53□□□□□ -0.24
GINS3-201ENST00000318129 PPP2R1AP30153 589 aa13.53□□□□□ -0.24
GINS3-201ENST00000318129 CCDC136Q96JN2 1154 aa13.53□□□□□ -0.24
GINS3-201ENST00000318129 ANKRD26Q9UPS8 1709 aa13.52□□□□□ -0.24
GINS3-201ENST00000318129 SSH2Q76I76 1423 aa13.52□□□□□ -0.24
GINS3-201ENST00000318129 KIF1AQ12756 1690 aa13.52□□□□□ -0.24
GINS3-201ENST00000318129 GGNBP2Q9H3C7 697 aa13.52□□□□□ -0.25
GINS3-201ENST00000318129 PAK3O75914 559 aaPredicted RBP13.51□□□□□ -0.25
GINS3-201ENST00000318129 IRX6P78412 446 aaPredicted RBP13.51□□□□□ -0.25
GINS3-201ENST00000318129 PSME1Q06323 249 aa13.51□□□□□ -0.25
GINS3-201ENST00000318129 ORAI2Q96SN7 254 aa13.51□□□□□ -0.25
GINS3-201ENST00000318129 LTBP4Q8N2S1 1624 aa13.51□□□□□ -0.25
GINS3-201ENST00000318129 COG3Q96JB2 828 aa13.51□□□□□ -0.25
GINS3-201ENST00000318129 PPP4R2Q9NY27 417 aa13.51□□□□□ -0.25
GINS3-201ENST00000318129 NRKQ7Z2Y5 1582 aa13.51□□□□□ -0.25
GINS3-201ENST00000318129 NME9Q86XW9 330 aa13.5□□□□□ -0.25
GINS3-201ENST00000318129 CCDC184Q52MB2 194 aa13.49□□□□□ -0.25
GINS3-201ENST00000318129 IL27Q8NEV9 243 aa13.49□□□□□ -0.25
GINS3-201ENST00000318129 SLAIN2Q9P270 581 aa13.49□□□□□ -0.25
GINS3-201ENST00000318129 USP31Q70CQ4 1352 aa13.48□□□□□ -0.25
GINS3-201ENST00000318129 FOXO3O43524 673 aa13.47□□□□□ -0.25
GINS3-201ENST00000318129 TNNT2P45379 298 aaPredicted RBP13.46□□□□□ -0.25
GINS3-201ENST00000318129 KRT28Q7Z3Y7 464 aa13.46□□□□□ -0.25
GINS3-201ENST00000318129 NPHP3Q7Z494 1330 aa13.46□□□□□ -0.25
GINS3-201ENST00000318129 PNISRQ8TF01 805 aaKnown RBP13.46□□□□□ -0.26
GINS3-201ENST00000318129 AATKQ6ZMQ8 1374 aa13.45□□□□□ -0.26
GINS3-201ENST00000318129 CFAP53Q96M91 514 aa13.45□□□□□ -0.26
GINS3-201ENST00000318129 ABTB2Q8N961 1025 aa13.44□□□□□ -0.26
GINS3-201ENST00000318129 ZRANB1Q9UGI0 708 aa13.44□□□□□ -0.26
GINS3-201ENST00000318129 OVOS2A0A0J9YW53 1432 aa13.44□□□□□ -0.26
GINS3-201ENST00000318129 OVOS2Q6IE36 1432 aa13.44□□□□□ -0.26
GINS3-201ENST00000318129 MTHFSP49914 203 aa13.44□□□□□ -0.26
GINS3-201ENST00000318129 NLRP6P59044 892 aa13.44□□□□□ -0.26
GINS3-201ENST00000318129 BRINP3Q76B58 766 aa13.44□□□□□ -0.26
GINS3-201ENST00000318129 FAM9BQ8IZU0 186 aa13.43□□□□□ -0.26
GINS3-201ENST00000318129 USP54Q70EL1 1684 aa13.43□□□□□ -0.26
GINS3-201ENST00000318129 SBNO1A3KN83 1393 aa13.43□□□□□ -0.26
GINS3-201ENST00000318129 RTL5Q5HYW3 569 aaPredicted RBP13.42□□□□□ -0.26
GINS3-201ENST00000318129 PIK3C2AO00443 1686 aa13.42□□□□□ -0.26
GINS3-201ENST00000318129 HNRNPUQ00839 825 aaKnown RBP eCLIP13.42□□□□□ -0.26
GINS3-201ENST00000318129 TRPM3Q9HCF6 1732 aaPredicted RBP13.41□□□□□ -0.26
GINS3-201ENST00000318129 INSRP06213 1382 aa13.41□□□□□ -0.26
GINS3-201ENST00000318129 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.41□□□□□ -0.26
GINS3-201ENST00000318129 POLKQ9UBT6 870 aa13.41□□□□□ -0.26
GINS3-201ENST00000318129 MAP2P11137 1827 aaKnown RBP13.4□□□□□ -0.26
GINS3-201ENST00000318129 XPCQ01831 940 aaPredicted RBP13.4□□□□□ -0.26
GINS3-201ENST00000318129 WDR43Q15061 677 aaKnown RBP eCLIP13.4□□□□□ -0.26
GINS3-201ENST00000318129 RTN4Q9NQC3 1192 aaKnown RBP13.4□□□□□ -0.26
GINS3-201ENST00000318129 IQSEC2Q5JU85 1478 aa13.4□□□□□ -0.27
GINS3-201ENST00000318129 TOM1O60784 492 aa13.39□□□□□ -0.27
GINS3-201ENST00000318129 KCNH5Q8NCM2 988 aa13.39□□□□□ -0.27
GINS3-201ENST00000318129 IPO9Q96P70 1041 aaKnown RBP13.39□□□□□ -0.27
GINS3-201ENST00000318129 SMG6Q86US8 1419 aaKnown RBP13.39□□□□□ -0.27
GINS3-201ENST00000318129 PNPLA6Q8IY17 1366 aa13.39□□□□□ -0.27
GINS3-201ENST00000318129 PXDNQ92626 1479 aa13.39□□□□□ -0.27
GINS3-201ENST00000318129 SOS2Q07890 1332 aaPredicted RBP13.39□□□□□ -0.27
GINS3-201ENST00000318129 B4GALNT3Q6L9W6 998 aa13.38□□□□□ -0.27
GINS3-201ENST00000318129 NUDCQ9Y266 331 aa13.38□□□□□ -0.27
GINS3-201ENST00000318129 NUTM2GQ5VZR2 741 aa13.38□□□□□ -0.27
GINS3-201ENST00000318129 LMOD2Q6P5Q4 547 aa13.37□□□□□ -0.27
GINS3-201ENST00000318129 ARHGEF10O15013 1369 aa13.37□□□□□ -0.27
GINS3-201ENST00000318129 ALS2Q96Q42 1657 aa13.37□□□□□ -0.27
GINS3-201ENST00000318129 SPATA31A3Q5VYP0 1347 aa13.37□□□□□ -0.27
GINS3-201ENST00000318129 TNS3Q68CZ2 1445 aa13.37□□□□□ -0.27
GINS3-201ENST00000318129 DDX17Q92841 729 aaKnown RBP13.37□□□□□ -0.27
GINS3-201ENST00000318129 KIF24Q5T7B8 1368 aa13.37□□□□□ -0.27
GINS3-201ENST00000318129 CDK12Q9NYV4 1490 aaPredicted RBP13.37□□□□□ -0.27
GINS3-201ENST00000318129 MARF1Q9Y4F3 1742 aaKnown RBP13.36□□□□□ -0.27
GINS3-201ENST00000318129 PPM1GO15355 546 aaPredicted RBP13.36□□□□□ -0.27
GINS3-201ENST00000318129 FBLN1P23142 703 aa13.36□□□□□ -0.27
GINS3-201ENST00000318129 EMILIN1Q9Y6C2 1016 aa13.36□□□□□ -0.27
GINS3-201ENST00000318129 USP19O94966 1318 aa13.36□□□□□ -0.27
GINS3-201ENST00000318129 DIAPH1O60610 1272 aaKnown RBP13.36□□□□□ -0.27
GINS3-201ENST00000318129 RRS1Q15050 365 aaKnown RBP13.36□□□□□ -0.27
GINS3-201ENST00000318129 NHSL1Q5SYE7 1610 aa13.35□□□□□ -0.27
GINS3-201ENST00000318129 ADAMTS8Q9UP79 889 aa13.35□□□□□ -0.27
GINS3-201ENST00000318129 COL3A1P02461 1466 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms