RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 CLUAP1Q96AJ1 413 aa17.85■□□□□ 0.45
ATG4C-201ENST00000317868 POGKQ9P215 609 aa17.85■□□□□ 0.45
ATG4C-201ENST00000317868 IGHDP01880 384 aa17.84■□□□□ 0.45
ATG4C-201ENST00000317868 U2AF1L5P0DN76 240 aaPredicted RBP17.84■□□□□ 0.45
ATG4C-201ENST00000317868 U2AF1Q01081 240 aaKnown RBP eCLIP17.84■□□□□ 0.45
ATG4C-201ENST00000317868 CT47B1P0C2W7 299 aaPredicted RBP17.84■□□□□ 0.45
ATG4C-201ENST00000317868 FAM161AQ3B820 660 aa17.84■□□□□ 0.45
ATG4C-201ENST00000317868 NEUROD2Q15784 382 aa17.83■□□□□ 0.45
ATG4C-201ENST00000317868 MYH16Q9H6N6 1097 aa17.83■□□□□ 0.44
ATG4C-201ENST00000317868 FAM135BQ49AJ0 1406 aa17.83■□□□□ 0.44
ATG4C-201ENST00000317868 PANK1Q8TE04 598 aa17.82■□□□□ 0.44
ATG4C-201ENST00000317868 ZMYM3Q14202 1370 aa17.82■□□□□ 0.44
ATG4C-201ENST00000317868 TRIM35Q9UPQ4 493 aa17.82■□□□□ 0.44
ATG4C-201ENST00000317868 IL16Q14005 1332 aa17.82■□□□□ 0.44
ATG4C-201ENST00000317868 HDGFL2Q7Z4V5 671 aaPredicted RBP17.82■□□□□ 0.44
ATG4C-201ENST00000317868 TMPOP42166 694 aaKnown RBP17.81■□□□□ 0.44
ATG4C-201ENST00000317868 EDC4Q6P2E9 1401 aaKnown RBP17.8■□□□□ 0.44
ATG4C-201ENST00000317868 NPM2Q86SE8 214 aaKnown RBP17.8■□□□□ 0.44
ATG4C-201ENST00000317868 COG6Q9Y2V7 657 aa17.8■□□□□ 0.44
ATG4C-201ENST00000317868 RLBP1P12271 317 aa17.8■□□□□ 0.44
ATG4C-201ENST00000317868 CABP1Q9NZU7 370 aa17.8■□□□□ 0.44
ATG4C-201ENST00000317868 NALCNQ8IZF0 1738 aa17.8■□□□□ 0.44
ATG4C-201ENST00000317868 CDK12Q9NYV4 1490 aaPredicted RBP17.8■□□□□ 0.44
ATG4C-201ENST00000317868 METP08581 1390 aa17.79■□□□□ 0.44
ATG4C-201ENST00000317868 SIRT1Q96EB6 747 aa17.78■□□□□ 0.44
ATG4C-201ENST00000317868 PPIP5K1Q6PFW1 1433 aa17.78■□□□□ 0.44
ATG4C-201ENST00000317868 DDRGK1Q96HY6 314 aa17.78■□□□□ 0.44
ATG4C-201ENST00000317868 STAG3Q9UJ98 1225 aa17.78■□□□□ 0.44
ATG4C-201ENST00000317868 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.77■□□□□ 0.44
ATG4C-201ENST00000317868 TNNQ9UQP3 1299 aa17.77■□□□□ 0.43
ATG4C-201ENST00000317868 DIAPH1O60610 1272 aaKnown RBP17.76■□□□□ 0.43
ATG4C-201ENST00000317868 WAPLQ7Z5K2 1190 aa17.76■□□□□ 0.43
ATG4C-201ENST00000317868 AATKQ6ZMQ8 1374 aa17.76■□□□□ 0.43
ATG4C-201ENST00000317868 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.75■□□□□ 0.43
ATG4C-201ENST00000317868 SENP3Q9H4L4 574 aaPredicted RBP17.75■□□□□ 0.43
ATG4C-201ENST00000317868 MAPK8IP3Q9UPT6 1336 aa17.75■□□□□ 0.43
ATG4C-201ENST00000317868 CANXP27824 592 aaKnown RBP17.75■□□□□ 0.43
ATG4C-201ENST00000317868 FRAT1Q92837 279 aaPredicted RBP17.74■□□□□ 0.43
ATG4C-201ENST00000317868 PMFBP1Q8TBY8 1022 aa17.74■□□□□ 0.43
ATG4C-201ENST00000317868 POLKQ9UBT6 870 aa17.74■□□□□ 0.43
ATG4C-201ENST00000317868 PCDHB15Q9Y5E8 787 aa17.74■□□□□ 0.43
ATG4C-201ENST00000317868 WASLO00401 505 aaPredicted RBP17.73■□□□□ 0.43
ATG4C-201ENST00000317868 RIMS1Q86UR5 1692 aaKnown RBP17.73■□□□□ 0.43
ATG4C-201ENST00000317868 U2SURPO15042 1029 aaKnown RBP17.73■□□□□ 0.43
ATG4C-201ENST00000317868 FCHSD2O94868 740 aa17.73■□□□□ 0.43
ATG4C-201ENST00000317868 RSPH6AQ9H0K4 717 aa17.73■□□□□ 0.43
ATG4C-201ENST00000317868 MVPQ14764 893 aaKnown RBP17.72■□□□□ 0.43
ATG4C-201ENST00000317868 PNNQ9H307 717 aaKnown RBP17.72■□□□□ 0.43
ATG4C-201ENST00000317868 RGPD1P0DJD0 1748 aa17.72■□□□□ 0.43
ATG4C-201ENST00000317868 ADAMTS13Q76LX8 1427 aa17.72■□□□□ 0.43
ATG4C-201ENST00000317868 RGS3P49796 1198 aa17.72■□□□□ 0.43
ATG4C-201ENST00000317868 TSR2Q969E8 191 aaKnown RBP17.72■□□□□ 0.43
ATG4C-201ENST00000317868 TNRQ92752 1358 aa17.71■□□□□ 0.43
ATG4C-201ENST00000317868 USP19O94966 1318 aa17.71■□□□□ 0.43
ATG4C-201ENST00000317868 TMEM2Q9UHN6 1383 aa17.71■□□□□ 0.43
ATG4C-201ENST00000317868 EXOSC9Q06265 439 aaKnown RBP17.71■□□□□ 0.43
ATG4C-201ENST00000317868 ZKSCAN2Q63HK3 967 aa17.71■□□□□ 0.43
ATG4C-201ENST00000317868 BCL2L13Q9BXK5 485 aa17.71■□□□□ 0.43
ATG4C-201ENST00000317868 NBR1Q14596 966 aa17.7■□□□□ 0.42
ATG4C-201ENST00000317868 FMN2Q9NZ56 1722 aa17.69■□□□□ 0.42
ATG4C-201ENST00000317868 RIPK4P57078 832 aa17.68■□□□□ 0.42
ATG4C-201ENST00000317868 BRPF1P55201 1214 aaPredicted RBP17.68■□□□□ 0.42
ATG4C-201ENST00000317868 DZIP1LQ8IYY4 767 aaKnown RBP17.68■□□□□ 0.42
ATG4C-201ENST00000317868 PEAK1Q9H792 1746 aa17.67■□□□□ 0.42
ATG4C-201ENST00000317868 SSH1Q8WYL5 1049 aa17.67■□□□□ 0.42
ATG4C-201ENST00000317868 TRIM27P14373 513 aa17.67■□□□□ 0.42
ATG4C-201ENST00000317868 MLECQ14165 292 aa17.67■□□□□ 0.42
ATG4C-201ENST00000317868 IL13P35225 146 aa17.66■□□□□ 0.42
ATG4C-201ENST00000317868 USP35Q9P2H5 1018 aa17.66■□□□□ 0.42
ATG4C-201ENST00000317868 SLIT1O75093 1534 aa17.66■□□□□ 0.42
ATG4C-201ENST00000317868 PLEKHG1Q9ULL1 1385 aa17.66■□□□□ 0.42
ATG4C-201ENST00000317868 DEKP35659 375 aaKnown RBP17.65■□□□□ 0.42
ATG4C-201ENST00000317868 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.65■□□□□ 0.42
ATG4C-201ENST00000317868 ALDH1L2Q3SY69 923 aa17.65■□□□□ 0.42
ATG4C-201ENST00000317868 ROBO2Q9HCK4 1378 aa17.65■□□□□ 0.42
ATG4C-201ENST00000317868 ATF7IPQ6VMQ6 1270 aa17.65■□□□□ 0.42
ATG4C-201ENST00000317868 NUDT16Q96DE0 195 aaKnown RBP17.65■□□□□ 0.42
ATG4C-201ENST00000317868 PRR36Q9H6K5 1346 aa17.64■□□□□ 0.41
ATG4C-201ENST00000317868 PPM1GO15355 546 aaPredicted RBP17.64■□□□□ 0.41
ATG4C-201ENST00000317868 SMC4Q9NTJ3 1288 aa17.64■□□□□ 0.41
ATG4C-201ENST00000317868 ARHGAP23Q9P227 1491 aa17.64■□□□□ 0.41
ATG4C-201ENST00000317868 OVOS2A0A0J9YW53 1432 aa17.64■□□□□ 0.41
ATG4C-201ENST00000317868 PRKAR2BP31323 418 aa17.64■□□□□ 0.41
ATG4C-201ENST00000317868 OVOS2Q6IE36 1432 aa17.64■□□□□ 0.41
ATG4C-201ENST00000317868 RWDD1Q9H446 243 aaPredicted RBP17.64■□□□□ 0.41
ATG4C-201ENST00000317868 HDAC1Q13547 482 aaPredicted RBP17.63■□□□□ 0.41
ATG4C-201ENST00000317868 TXNDC2Q86VQ3 553 aa17.63■□□□□ 0.41
ATG4C-201ENST00000317868 NME9Q86XW9 330 aa17.63■□□□□ 0.41
ATG4C-201ENST00000317868 ZNF428Q96B54 188 aa17.63■□□□□ 0.41
ATG4C-201ENST00000317868 FER1L4A9Z1Z3 1794 aa17.63■□□□□ 0.41
ATG4C-201ENST00000317868 USP54Q70EL1 1684 aa17.63■□□□□ 0.41
ATG4C-201ENST00000317868 PTCH1Q13635 1447 aa17.63■□□□□ 0.41
ATG4C-201ENST00000317868 RGPD8O14715 1765 aaPredicted RBP17.63■□□□□ 0.41
ATG4C-201ENST00000317868 FBLN1P23142 703 aa17.63■□□□□ 0.41
ATG4C-201ENST00000317868 HDGFP51858 240 aaKnown RBP17.63■□□□□ 0.41
ATG4C-201ENST00000317868 PDZRN3Q9UPQ7 1066 aa17.63■□□□□ 0.41
ATG4C-201ENST00000317868 CCDC61Q9Y6R9 512 aa17.63■□□□□ 0.41
ATG4C-201ENST00000317868 PIK3R4Q99570 1358 aa17.63■□□□□ 0.41
ATG4C-201ENST00000317868 KIF16BQ96L93 1317 aa17.63■□□□□ 0.41
ATG4C-201ENST00000317868 NFE2L2Q16236 605 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms