RNA–Protein interactions for RNA: ENST00000316757.3

APBA3-201, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APBA3, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-201ENST00000316757 TOPAZ1Q8N9V7 1692 aa30.76■■■□□ 2.51
APBA3-201ENST00000316757 AMOTL2Q9Y2J4 779 aa30.75■■■□□ 2.51
APBA3-201ENST00000316757 CDC42BPGQ6DT37 1551 aa30.75■■■□□ 2.51
APBA3-201ENST00000316757 WWC1Q8IX03 1113 aa30.75■■■□□ 2.51
APBA3-201ENST00000316757 PIK3R4Q99570 1358 aa30.73■■■□□ 2.51
APBA3-201ENST00000316757 CRBNQ96SW2 442 aa30.73■■■□□ 2.51
APBA3-201ENST00000316757 CHD2O14647 1828 aaKnown RBP30.73■■■□□ 2.51
APBA3-201ENST00000316757 ANKLE2Q86XL3 938 aa30.72■■■□□ 2.51
APBA3-201ENST00000316757 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.72■■■□□ 2.51
APBA3-201ENST00000316757 NUDT16Q96DE0 195 aaKnown RBP30.72■■■□□ 2.51
APBA3-201ENST00000316757 TCP11L2Q8N4U5 519 aa30.71■■■□□ 2.51
APBA3-201ENST00000316757 DMRT2Q9Y5R5 561 aa30.7■■■□□ 2.51
APBA3-201ENST00000316757 CPSF1Q10570 1443 aaKnown RBP30.7■■■□□ 2.51
APBA3-201ENST00000316757 NCBP3Q53F19 620 aaKnown RBP30.7■■■□□ 2.5
APBA3-201ENST00000316757 PHF23Q9BUL5 403 aaPredicted RBP30.69■■■□□ 2.5
APBA3-201ENST00000316757 COL3A1P02461 1466 aaPredicted RBP30.68■■■□□ 2.5
APBA3-201ENST00000316757 CCDC61Q9Y6R9 512 aa30.68■■■□□ 2.5
APBA3-201ENST00000316757 FANCIQ9NVI1 1328 aa30.67■■■□□ 2.5
APBA3-201ENST00000316757 U2AF1L5P0DN76 240 aaPredicted RBP30.66■■■□□ 2.5
APBA3-201ENST00000316757 U2AF1Q01081 240 aaKnown RBP eCLIP30.66■■■□□ 2.5
APBA3-201ENST00000316757 CCDC27Q2M243 656 aa30.66■■■□□ 2.5
APBA3-201ENST00000316757 C20orf194Q5TEA3 1177 aa30.66■■■□□ 2.5
APBA3-201ENST00000316757 EDC4Q6P2E9 1401 aaKnown RBP30.66■■■□□ 2.5
APBA3-201ENST00000316757 PRR36Q9H6K5 1346 aa30.65■■■□□ 2.5
APBA3-201ENST00000316757 WDR63Q8IWG1 891 aa30.64■■■□□ 2.5
APBA3-201ENST00000316757 RRP7AQ9Y3A4 280 aaKnown RBP30.63■■■□□ 2.49
APBA3-201ENST00000316757 NEUROD2Q15784 382 aa30.62■■■□□ 2.49
APBA3-201ENST00000316757 RGPD8O14715 1765 aaPredicted RBP30.61■■■□□ 2.49
APBA3-201ENST00000316757 NCKAP5LQ9HCH0 1330 aa30.6■■■□□ 2.49
APBA3-201ENST00000316757 NRKQ7Z2Y5 1582 aa30.6■■■□□ 2.49
APBA3-201ENST00000316757 PNPLA6Q8IY17 1366 aa30.59■■■□□ 2.49
APBA3-201ENST00000316757 KCNA6P17658 529 aa30.58■■■□□ 2.49
APBA3-201ENST00000316757 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.58■■■□□ 2.49
APBA3-201ENST00000316757 NPHP4O75161 1426 aaPredicted RBP30.57■■■□□ 2.48
APBA3-201ENST00000316757 MAP2P11137 1827 aaKnown RBP30.56■■■□□ 2.48
APBA3-201ENST00000316757 FMN2Q9NZ56 1722 aa30.56■■■□□ 2.48
APBA3-201ENST00000316757 NALCNQ8IZF0 1738 aa30.55■■■□□ 2.48
APBA3-201ENST00000316757 U2SURPO15042 1029 aaKnown RBP30.55■■■□□ 2.48
APBA3-201ENST00000316757 BCAR3O75815 825 aa30.54■■■□□ 2.48
APBA3-201ENST00000316757 PLEKHF1Q96S99 279 aa30.54■■■□□ 2.48
APBA3-201ENST00000316757 ZNF692Q9BU19 519 aaPredicted RBP30.54■■■□□ 2.48
APBA3-201ENST00000316757 DIAPH1O60610 1272 aaKnown RBP30.53■■■□□ 2.48
APBA3-201ENST00000316757 TCERG1O14776 1098 aaKnown RBP30.51■■■□□ 2.48
APBA3-201ENST00000316757 PLEKHG3A1L390 1219 aa30.51■■■□□ 2.47
APBA3-201ENST00000316757 NUTM2FA1L443 756 aa30.5■■■□□ 2.47
APBA3-201ENST00000316757 PNNQ9H307 717 aaKnown RBP30.48■■■□□ 2.47
APBA3-201ENST00000316757 ACEP12821 1306 aa30.47■■■□□ 2.47
APBA3-201ENST00000316757 MAPK8IP3Q9UPT6 1336 aa30.47■■■□□ 2.47
APBA3-201ENST00000316757 MYH16Q9H6N6 1097 aa30.47■■■□□ 2.47
APBA3-201ENST00000316757 POLKQ9UBT6 870 aa30.47■■■□□ 2.47
APBA3-201ENST00000316757 ANKARQ7Z5J8 1434 aa30.47■■■□□ 2.47
APBA3-201ENST00000316757 NME9Q86XW9 330 aa30.46■■■□□ 2.47
APBA3-201ENST00000316757 NWD1Q149M9 1564 aa30.46■■■□□ 2.47
APBA3-201ENST00000316757 TMPOP42166 694 aaKnown RBP30.45■■■□□ 2.47
APBA3-201ENST00000316757 USP6P35125 1406 aa30.45■■■□□ 2.47
APBA3-201ENST00000316757 KDM2BQ8NHM5 1336 aa30.45■■■□□ 2.47
APBA3-201ENST00000316757 PDE3AQ14432 1141 aa30.45■■■□□ 2.46
APBA3-201ENST00000316757 MS4A1P11836 297 aa30.42■■■□□ 2.46
APBA3-201ENST00000316757 RARSP54136 660 aaKnown RBP30.42■■■□□ 2.46
APBA3-201ENST00000316757 CENPQQ7L2Z9 268 aaPredicted RBP30.42■■■□□ 2.46
APBA3-201ENST00000316757 AATKQ6ZMQ8 1374 aa30.41■■■□□ 2.46
APBA3-201ENST00000316757 COG3Q96JB2 828 aa30.4■■■□□ 2.46
APBA3-201ENST00000316757 MSH5O43196 834 aa30.4■■■□□ 2.46
APBA3-201ENST00000316757 FCHSD2O94868 740 aa30.4■■■□□ 2.46
APBA3-201ENST00000316757 TTC21BQ7Z4L5 1316 aa30.39■■■□□ 2.46
APBA3-201ENST00000316757 TRIM35Q9UPQ4 493 aa30.39■■■□□ 2.46
APBA3-201ENST00000316757 LRRC7Q96NW7 1537 aa30.39■■■□□ 2.46
APBA3-201ENST00000316757 CDK12Q9NYV4 1490 aaPredicted RBP30.38■■■□□ 2.45
APBA3-201ENST00000316757 CANXP27824 592 aaKnown RBP30.38■■■□□ 2.45
APBA3-201ENST00000316757 ZRANB1Q9UGI0 708 aa30.38■■■□□ 2.45
APBA3-201ENST00000316757 FBLN1P23142 703 aa30.37■■■□□ 2.45
APBA3-201ENST00000316757 SSH2Q76I76 1423 aa30.37■■■□□ 2.45
APBA3-201ENST00000316757 ADGRL3Q9HAR2 1447 aa30.37■■■□□ 2.45
APBA3-201ENST00000316757 PPM1GO15355 546 aaPredicted RBP30.37■■■□□ 2.45
APBA3-201ENST00000316757 IL16Q14005 1332 aa30.36■■■□□ 2.45
APBA3-201ENST00000316757 CT47B1P0C2W7 299 aaPredicted RBP30.35■■■□□ 2.45
APBA3-201ENST00000316757 PMFBP1Q8TBY8 1022 aa30.35■■■□□ 2.45
APBA3-201ENST00000316757 OVOS2A0A0J9YW53 1432 aa30.34■■■□□ 2.45
APBA3-201ENST00000316757 OVOS2Q6IE36 1432 aa30.34■■■□□ 2.45
APBA3-201ENST00000316757 RIPK4P57078 832 aa30.34■■■□□ 2.45
APBA3-201ENST00000316757 ANP32EQ9BTT0 268 aa30.34■■■□□ 2.45
APBA3-201ENST00000316757 EMILIN1Q9Y6C2 1016 aa30.34■■■□□ 2.45
APBA3-201ENST00000316757 RSPH6AQ9H0K4 717 aa30.33■■■□□ 2.45
APBA3-201ENST00000316757 NGDNQ8NEJ9 315 aaKnown RBP30.32■■■□□ 2.44
APBA3-201ENST00000316757 TTC21AQ8NDW8 1320 aa30.31■■■□□ 2.44
APBA3-201ENST00000316757 FRAT1Q92837 279 aaPredicted RBP30.31■■■□□ 2.44
APBA3-201ENST00000316757 PIK3C2AO00443 1686 aa30.3■■■□□ 2.44
APBA3-201ENST00000316757 NEFMP07197 916 aa30.3■■■□□ 2.44
APBA3-201ENST00000316757 PRKAR2BP31323 418 aa30.29■■■□□ 2.44
APBA3-201ENST00000316757 IL13P35225 146 aa30.29■■■□□ 2.44
APBA3-201ENST00000316757 PANK1Q8TE04 598 aa30.29■■■□□ 2.44
APBA3-201ENST00000316757 PDE4AP27815 886 aa30.28■■■□□ 2.44
APBA3-201ENST00000316757 TSR2Q969E8 191 aaKnown RBP30.27■■■□□ 2.44
APBA3-201ENST00000316757 RBM33Q96EV2 1170 aaKnown RBP30.27■■■□□ 2.44
APBA3-201ENST00000316757 COG6Q9Y2V7 657 aa30.26■■■□□ 2.43
APBA3-201ENST00000316757 USP54Q70EL1 1684 aa30.26■■■□□ 2.43
APBA3-201ENST00000316757 BACH2Q9BYV9 841 aa30.26■■■□□ 2.43
APBA3-201ENST00000316757 AAMPQ13685 434 aa30.25■■■□□ 2.43
APBA3-201ENST00000316757 EXOSC9Q06265 439 aaKnown RBP30.24■■■□□ 2.43
APBA3-201ENST00000316757 CLUAP1Q96AJ1 413 aa30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms