RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 MCM2P49736 904 aa5.89□□□□□ -1.47
PTPN13-201ENST00000316707 UNC13BO14795 1591 aa5.89□□□□□ -1.47
PTPN13-201ENST00000316707 REC8O95072 547 aa5.89□□□□□ -1.47
PTPN13-201ENST00000316707 ERBB4Q15303 1308 aa5.89□□□□□ -1.47
PTPN13-201ENST00000316707 KIAA2012Q0VF49 1180 aa5.88□□□□□ -1.47
PTPN13-201ENST00000316707 SASS6Q6UVJ0 657 aa5.88□□□□□ -1.47
PTPN13-201ENST00000316707 TTC37Q6PGP7 1564 aa5.88□□□□□ -1.47
PTPN13-201ENST00000316707 CROCC2H7BZ55 1655 aa5.88□□□□□ -1.47
PTPN13-201ENST00000316707 ARHGAP31Q2M1Z3 1444 aa5.88□□□□□ -1.47
PTPN13-201ENST00000316707 ERVK-7P63135 1459 aa5.88□□□□□ -1.47
PTPN13-201ENST00000316707 PHF14O94880 888 aa5.88□□□□□ -1.47
PTPN13-201ENST00000316707 LNPKQ9C0E8 428 aa5.88□□□□□ -1.47
PTPN13-201ENST00000316707 EVC2Q86UK5 1308 aa5.88□□□□□ -1.47
PTPN13-201ENST00000316707 NSD3Q9BZ95 1437 aa5.88□□□□□ -1.47
PTPN13-201ENST00000316707 MYOM2P54296 1465 aa5.88□□□□□ -1.47
PTPN13-201ENST00000316707 PRIMPOLQ96LW4 560 aa5.88□□□□□ -1.47
PTPN13-201ENST00000316707 FAM13BQ9NYF5 915 aa5.88□□□□□ -1.47
PTPN13-201ENST00000316707 PLCH2O75038 1416 aa5.87□□□□□ -1.47
PTPN13-201ENST00000316707 R3HCC1Q9Y3T6 440 aaKnown RBP5.87□□□□□ -1.47
PTPN13-201ENST00000316707 TPM3P06753 285 aa5.87□□□□□ -1.47
PTPN13-201ENST00000316707 INTS3Q68E01 1043 aaKnown RBP5.87□□□□□ -1.47
PTPN13-201ENST00000316707 ARHGAP5Q13017 1502 aa5.87□□□□□ -1.47
PTPN13-201ENST00000316707 PTMAP06454 111 aaKnown RBP5.87□□□□□ -1.47
PTPN13-201ENST00000316707 TMEM57Q8N5G2 664 aa5.87□□□□□ -1.47
PTPN13-201ENST00000316707 TMPOP42166 694 aaKnown RBP5.87□□□□□ -1.47
PTPN13-201ENST00000316707 ANKRD45Q5TZF3 282 aa5.87□□□□□ -1.47
PTPN13-201ENST00000316707 TERF2IPQ9NYB0 399 aa5.87□□□□□ -1.47
PTPN13-201ENST00000316707 SSFA2P28290 1259 aa5.86□□□□□ -1.47
PTPN13-201ENST00000316707 LMOD3Q0VAK6 560 aa5.86□□□□□ -1.47
PTPN13-201ENST00000316707 UVSSAQ2YD98 709 aa5.86□□□□□ -1.47
PTPN13-201ENST00000316707 C14orf93Q9H972 538 aaKnown RBP5.86□□□□□ -1.47
PTPN13-201ENST00000316707 NEURL4Q96JN8 1562 aa5.86□□□□□ -1.47
PTPN13-201ENST00000316707 TRPM2O94759 1503 aa5.86□□□□□ -1.47
PTPN13-201ENST00000316707 FCHSD2O94868 740 aa5.86□□□□□ -1.47
PTPN13-201ENST00000316707 GNAI1P63096 354 aa5.86□□□□□ -1.47
PTPN13-201ENST00000316707 UTP14CQ5TAP6 766 aaKnown RBP5.86□□□□□ -1.47
PTPN13-201ENST00000316707 RPAP2Q8IXW5 612 aaPredicted RBP5.86□□□□□ -1.47
PTPN13-201ENST00000316707 NOB1Q9ULX3 412 aaKnown RBP5.86□□□□□ -1.47
PTPN13-201ENST00000316707 IQGAP3Q86VI3 1631 aa5.86□□□□□ -1.47
PTPN13-201ENST00000316707 TRAPPC8Q9Y2L5 1435 aa5.86□□□□□ -1.47
PTPN13-201ENST00000316707 RIPK4P57078 832 aa5.86□□□□□ -1.47
PTPN13-201ENST00000316707 CAVIN1Q6NZI2 390 aaKnown RBP5.86□□□□□ -1.47
PTPN13-201ENST00000316707 SLC12A5Q9H2X9 1139 aa5.86□□□□□ -1.47
PTPN13-201ENST00000316707 ANKRD36BQ8N2N9 1353 aa5.86□□□□□ -1.47
PTPN13-201ENST00000316707 LRSAM1Q6UWE0 723 aa5.86□□□□□ -1.47
PTPN13-201ENST00000316707 KIF24Q5T7B8 1368 aa5.86□□□□□ -1.47
PTPN13-201ENST00000316707 ZNF518AQ6AHZ1 1483 aa5.86□□□□□ -1.47
PTPN13-201ENST00000316707 U2SURPO15042 1029 aaKnown RBP5.85□□□□□ -1.47
PTPN13-201ENST00000316707 TBC1D9Q6ZT07 1266 aa5.85□□□□□ -1.47
PTPN13-201ENST00000316707 TNNQ9UQP3 1299 aa5.85□□□□□ -1.47
PTPN13-201ENST00000316707 SYCP2Q9BX26 1530 aa5.85□□□□□ -1.47
PTPN13-201ENST00000316707 IQSEC2Q5JU85 1478 aa5.85□□□□□ -1.47
PTPN13-201ENST00000316707 UQCRHLA0A096LP55 91 aa5.85□□□□□ -1.47
PTPN13-201ENST00000316707 CYP2E1P05181 493 aaPredicted RBP5.85□□□□□ -1.47
PTPN13-201ENST00000316707 UQCRHP07919 91 aa5.85□□□□□ -1.47
PTPN13-201ENST00000316707 EPB41L2O43491 1005 aaKnown RBP5.85□□□□□ -1.47
PTPN13-201ENST00000316707 MCCP23508 829 aa5.85□□□□□ -1.47
PTPN13-201ENST00000316707 ZSCAN23Q3MJ62 389 aa5.85□□□□□ -1.47
PTPN13-201ENST00000316707 REREQ9P2R6 1566 aa5.85□□□□□ -1.47
PTPN13-201ENST00000316707 PIK3R4Q99570 1358 aa5.85□□□□□ -1.47
PTPN13-201ENST00000316707 NOS1P29475 1434 aa5.85□□□□□ -1.47
PTPN13-201ENST00000316707 DIAPH1O60610 1272 aaKnown RBP5.85□□□□□ -1.47
PTPN13-201ENST00000316707 KIF20AO95235 890 aa5.85□□□□□ -1.47
PTPN13-201ENST00000316707 LMBRD1Q9NUN5 540 aa5.85□□□□□ -1.47
PTPN13-201ENST00000316707 KIF3BO15066 747 aa5.84□□□□□ -1.47
PTPN13-201ENST00000316707 VGFO15240 615 aaPredicted RBP5.84□□□□□ -1.47
PTPN13-201ENST00000316707 LETM1O95202 739 aaPredicted RBP5.84□□□□□ -1.47
PTPN13-201ENST00000316707 CHAF1AQ13111 956 aaPredicted RBP5.84□□□□□ -1.47
PTPN13-201ENST00000316707 ADGRF5Q8IZF2 1346 aa5.84□□□□□ -1.47
PTPN13-201ENST00000316707 RNF17Q9BXT8 1623 aaKnown RBP5.84□□□□□ -1.47
PTPN13-201ENST00000316707 HMMRO75330 724 aa5.84□□□□□ -1.47
PTPN13-201ENST00000316707 GAS2L2Q8NHY3 880 aa5.84□□□□□ -1.47
PTPN13-201ENST00000316707 TSR2Q969E8 191 aaKnown RBP5.84□□□□□ -1.47
PTPN13-201ENST00000316707 CCDC94Q9BW85 323 aaPredicted RBP5.84□□□□□ -1.47
PTPN13-201ENST00000316707 MCTP1Q6DN14 999 aa5.84□□□□□ -1.47
PTPN13-201ENST00000316707 KIF2CQ99661 725 aa5.84□□□□□ -1.47
PTPN13-201ENST00000316707 DIAPH3Q9NSV4 1193 aa5.84□□□□□ -1.47
PTPN13-201ENST00000316707 ATAD2Q6PL18 1390 aa5.84□□□□□ -1.48
PTPN13-201ENST00000316707 PDIA4P13667 645 aaKnown RBP5.84□□□□□ -1.48
PTPN13-201ENST00000316707 DCTPP1Q9H773 170 aa5.84□□□□□ -1.48
PTPN13-201ENST00000316707 ATP6V1DQ9Y5K8 247 aa5.84□□□□□ -1.48
PTPN13-201ENST00000316707 YEATS2Q9ULM3 1422 aa5.84□□□□□ -1.48
PTPN13-201ENST00000316707 PBRM1Q86U86 1689 aa5.83□□□□□ -1.48
PTPN13-201ENST00000316707 ZBTB7BO15156 539 aaPredicted RBP5.83□□□□□ -1.48
PTPN13-201ENST00000316707 INTS4Q96HW7 963 aaKnown RBP5.83□□□□□ -1.48
PTPN13-201ENST00000316707 GTPBP4Q9BZE4 634 aaKnown RBP5.83□□□□□ -1.48
PTPN13-201ENST00000316707 SAMD9LQ8IVG5 1584 aa5.83□□□□□ -1.48
PTPN13-201ENST00000316707 PRPF40AO75400 957 aaKnown RBP5.83□□□□□ -1.48
PTPN13-201ENST00000316707 DNTTIP2Q5QJE6 756 aaKnown RBP5.83□□□□□ -1.48
PTPN13-201ENST00000316707 TAF3Q5VWG9 929 aa5.83□□□□□ -1.48
PTPN13-201ENST00000316707 ANAPC15P60006 121 aa5.83□□□□□ -1.48
PTPN13-201ENST00000316707 TSPY26PQ9H489 355 aa5.83□□□□□ -1.48
PTPN13-201ENST00000316707 MADDQ8WXG6 1647 aa5.83□□□□□ -1.48
PTPN13-201ENST00000316707 PPIP5K1Q6PFW1 1433 aa5.83□□□□□ -1.48
PTPN13-201ENST00000316707 TRAK1Q9UPV9 953 aa5.83□□□□□ -1.48
PTPN13-201ENST00000316707 MYRIPQ8NFW9 859 aa5.82□□□□□ -1.48
PTPN13-201ENST00000316707 XPCQ01831 940 aaPredicted RBP5.82□□□□□ -1.48
PTPN13-201ENST00000316707 HDGFL2Q7Z4V5 671 aaPredicted RBP5.82□□□□□ -1.48
PTPN13-201ENST00000316707 PDCL2Q8N4E4 241 aa5.82□□□□□ -1.48
PTPN13-201ENST00000316707 RBSNQ9H1K0 784 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms