RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 DIAPH1O60610 1272 aaKnown RBP18.16■□□□□ 0.5
VAMP2-201ENST00000316509 DIP2AQ14689 1571 aa18.15■□□□□ 0.5
VAMP2-201ENST00000316509 AATKQ6ZMQ8 1374 aa18.15■□□□□ 0.5
VAMP2-201ENST00000316509 SPINK5Q9NQ38 1064 aaPredicted RBP18.15■□□□□ 0.5
VAMP2-201ENST00000316509 CEBPAP49715 358 aaPredicted RBP18.14■□□□□ 0.49
VAMP2-201ENST00000316509 ROBO2Q9HCK4 1378 aa18.14■□□□□ 0.49
VAMP2-201ENST00000316509 CRBNQ96SW2 442 aa18.14■□□□□ 0.49
VAMP2-201ENST00000316509 MYH16Q9H6N6 1097 aa18.14■□□□□ 0.49
VAMP2-201ENST00000316509 PLEKHF1Q96S99 279 aa18.13■□□□□ 0.49
VAMP2-201ENST00000316509 PLIN1O60240 522 aa18.13■□□□□ 0.49
VAMP2-201ENST00000316509 CT47B1P0C2W7 299 aaPredicted RBP18.13■□□□□ 0.49
VAMP2-201ENST00000316509 PLEKHG3A1L390 1219 aa18.12■□□□□ 0.49
VAMP2-201ENST00000316509 FCHSD2O94868 740 aa18.12■□□□□ 0.49
VAMP2-201ENST00000316509 PDE3AQ14432 1141 aa18.11■□□□□ 0.49
VAMP2-201ENST00000316509 POLKQ9UBT6 870 aa18.11■□□□□ 0.49
VAMP2-201ENST00000316509 IL16Q14005 1332 aa18.11■□□□□ 0.49
VAMP2-201ENST00000316509 FANCIQ9NVI1 1328 aa18.11■□□□□ 0.49
VAMP2-201ENST00000316509 MAPK8IP3Q9UPT6 1336 aa18.11■□□□□ 0.49
VAMP2-201ENST00000316509 PTCH1Q13635 1447 aa18.11■□□□□ 0.49
VAMP2-201ENST00000316509 U2SURPO15042 1029 aaKnown RBP18.1■□□□□ 0.49
VAMP2-201ENST00000316509 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.1■□□□□ 0.49
VAMP2-201ENST00000316509 PIK3R4Q99570 1358 aa18.1■□□□□ 0.49
VAMP2-201ENST00000316509 AAMPQ13685 434 aa18.1■□□□□ 0.49
VAMP2-201ENST00000316509 MON2Q7Z3U7 1717 aa18.09■□□□□ 0.49
VAMP2-201ENST00000316509 TCERG1O14776 1098 aaKnown RBP18.09■□□□□ 0.49
VAMP2-201ENST00000316509 COG3Q96JB2 828 aa18.09■□□□□ 0.49
VAMP2-201ENST00000316509 DMRT2Q9Y5R5 561 aa18.09■□□□□ 0.49
VAMP2-201ENST00000316509 AKAP12Q02952 1782 aa18.08■□□□□ 0.49
VAMP2-201ENST00000316509 TMPOP42166 694 aaKnown RBP18.08■□□□□ 0.48
VAMP2-201ENST00000316509 NEUROD2Q15784 382 aa18.08■□□□□ 0.48
VAMP2-201ENST00000316509 NEFMP07197 916 aa18.07■□□□□ 0.48
VAMP2-201ENST00000316509 AMOTL2Q9Y2J4 779 aa18.07■□□□□ 0.48
VAMP2-201ENST00000316509 RRP7AQ9Y3A4 280 aaKnown RBP18.07■□□□□ 0.48
VAMP2-201ENST00000316509 PTPRUQ92729 1446 aa18.07■□□□□ 0.48
VAMP2-201ENST00000316509 PRR36Q9H6K5 1346 aa18.07■□□□□ 0.48
VAMP2-201ENST00000316509 MS4A1P11836 297 aa18.06■□□□□ 0.48
VAMP2-201ENST00000316509 CDK12Q9NYV4 1490 aaPredicted RBP18.06■□□□□ 0.48
VAMP2-201ENST00000316509 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.06■□□□□ 0.48
VAMP2-201ENST00000316509 ITSN1Q15811 1721 aa18.05■□□□□ 0.48
VAMP2-201ENST00000316509 ADAMTSL3P82987 1691 aa18.05■□□□□ 0.48
VAMP2-201ENST00000316509 C20orf194Q5TEA3 1177 aa18.05■□□□□ 0.48
VAMP2-201ENST00000316509 SLC26A8Q96RN1 970 aa18.05■□□□□ 0.48
VAMP2-201ENST00000316509 CENPQQ7L2Z9 268 aaPredicted RBP18.04■□□□□ 0.48
VAMP2-201ENST00000316509 NME9Q86XW9 330 aa18.04■□□□□ 0.48
VAMP2-201ENST00000316509 TOPAZ1Q8N9V7 1692 aa18.04■□□□□ 0.48
VAMP2-201ENST00000316509 BCAR3O75815 825 aa18.03■□□□□ 0.48
VAMP2-201ENST00000316509 RARSP54136 660 aaKnown RBP18.03■□□□□ 0.48
VAMP2-201ENST00000316509 TTC21BQ7Z4L5 1316 aa18.02■□□□□ 0.48
VAMP2-201ENST00000316509 TRIM35Q9UPQ4 493 aa18.02■□□□□ 0.48
VAMP2-201ENST00000316509 RIMS1Q86UR5 1692 aaKnown RBP18.02■□□□□ 0.47
VAMP2-201ENST00000316509 IL13P35225 146 aa18.01■□□□□ 0.47
VAMP2-201ENST00000316509 RSPH6AQ9H0K4 717 aa18.01■□□□□ 0.47
VAMP2-201ENST00000316509 ACEP12821 1306 aa18.01■□□□□ 0.47
VAMP2-201ENST00000316509 TTC21AQ8NDW8 1320 aa18.01■□□□□ 0.47
VAMP2-201ENST00000316509 CEP170BQ9Y4F5 1589 aaPredicted RBP18.01■□□□□ 0.47
VAMP2-201ENST00000316509 CALD1Q05682 793 aaKnown RBP18.01■□□□□ 0.47
VAMP2-201ENST00000316509 RIPK4P57078 832 aa18■□□□□ 0.47
VAMP2-201ENST00000316509 KDM2BQ8NHM5 1336 aa18■□□□□ 0.47
VAMP2-201ENST00000316509 USP6P35125 1406 aa18■□□□□ 0.47
VAMP2-201ENST00000316509 MAP2P11137 1827 aaKnown RBP17.99■□□□□ 0.47
VAMP2-201ENST00000316509 ANKARQ7Z5J8 1434 aa17.99■□□□□ 0.47
VAMP2-201ENST00000316509 XRN1Q8IZH2 1706 aaKnown RBP17.98■□□□□ 0.47
VAMP2-201ENST00000316509 SSH2Q76I76 1423 aa17.98■□□□□ 0.47
VAMP2-201ENST00000316509 CANXP27824 592 aaKnown RBP17.98■□□□□ 0.47
VAMP2-201ENST00000316509 ANKLE2Q86XL3 938 aa17.98■□□□□ 0.47
VAMP2-201ENST00000316509 NCKAP5LQ9HCH0 1330 aa17.98■□□□□ 0.47
VAMP2-201ENST00000316509 NRKQ7Z2Y5 1582 aa17.98■□□□□ 0.47
VAMP2-201ENST00000316509 PPM1GO15355 546 aaPredicted RBP17.97■□□□□ 0.47
VAMP2-201ENST00000316509 USP31Q70CQ4 1352 aa17.97■□□□□ 0.47
VAMP2-201ENST00000316509 ZNF142P52746 1687 aaPredicted RBP17.97■□□□□ 0.47
VAMP2-201ENST00000316509 NFE2L2Q16236 605 aa17.97■□□□□ 0.47
VAMP2-201ENST00000316509 ZNF428Q96B54 188 aa17.97■□□□□ 0.47
VAMP2-201ENST00000316509 EMILIN1Q9Y6C2 1016 aa17.97■□□□□ 0.47
VAMP2-201ENST00000316509 OVOS2A0A0J9YW53 1432 aa17.96■□□□□ 0.47
VAMP2-201ENST00000316509 OVOS2Q6IE36 1432 aa17.96■□□□□ 0.47
VAMP2-201ENST00000316509 PRKAR2BP31323 418 aa17.96■□□□□ 0.47
VAMP2-201ENST00000316509 LMOD3Q0VAK6 560 aa17.96■□□□□ 0.47
VAMP2-201ENST00000316509 LRRC7Q96NW7 1537 aa17.95■□□□□ 0.46
VAMP2-201ENST00000316509 ZRANB1Q9UGI0 708 aa17.94■□□□□ 0.46
VAMP2-201ENST00000316509 PLPPR3Q6T4P5 718 aa17.93■□□□□ 0.46
VAMP2-201ENST00000316509 ZKSCAN2Q63HK3 967 aa17.91■□□□□ 0.46
VAMP2-201ENST00000316509 FBLN1P23142 703 aa17.91■□□□□ 0.46
VAMP2-201ENST00000316509 EXOSC9Q06265 439 aaKnown RBP17.91■□□□□ 0.46
VAMP2-201ENST00000316509 ALDH1L2Q3SY69 923 aa17.91■□□□□ 0.46
VAMP2-201ENST00000316509 CLUAP1Q96AJ1 413 aa17.91■□□□□ 0.46
VAMP2-201ENST00000316509 NGDNQ8NEJ9 315 aaKnown RBP17.9■□□□□ 0.46
VAMP2-201ENST00000316509 NALCNQ8IZF0 1738 aa17.9■□□□□ 0.46
VAMP2-201ENST00000316509 BRPF1P55201 1214 aaPredicted RBP17.9■□□□□ 0.46
VAMP2-201ENST00000316509 GNAI1P63096 354 aa17.9■□□□□ 0.46
VAMP2-201ENST00000316509 FRAT1Q92837 279 aaPredicted RBP17.9■□□□□ 0.46
VAMP2-201ENST00000316509 KCNA6P17658 529 aa17.89■□□□□ 0.45
VAMP2-201ENST00000316509 RRS1Q15050 365 aaKnown RBP17.89■□□□□ 0.45
VAMP2-201ENST00000316509 PMFBP1Q8TBY8 1022 aa17.89■□□□□ 0.45
VAMP2-201ENST00000316509 IFT57Q9NWB7 429 aa17.89■□□□□ 0.45
VAMP2-201ENST00000316509 SETD1BQ9UPS6 1966 aaKnown RBP17.89■□□□□ 0.45
VAMP2-201ENST00000316509 KIF24Q5T7B8 1368 aa17.88■□□□□ 0.45
VAMP2-201ENST00000316509 IPO8O15397 1037 aaKnown RBP17.88■□□□□ 0.45
VAMP2-201ENST00000316509 PDE4AP27815 886 aa17.88■□□□□ 0.45
VAMP2-201ENST00000316509 HMOX1P09601 288 aa17.87■□□□□ 0.45
VAMP2-201ENST00000316509 PANK1Q8TE04 598 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms