RNA–Protein interactions for RNA: ENST00000316087.12

SPATA9-202, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-202ENST00000316087 PHF12Q96QT6 1004 aa7.95□□□□□ -1.14
SPATA9-202ENST00000316087 IFT172Q9UG01 1749 aa7.95□□□□□ -1.14
SPATA9-202ENST00000316087 FANCAO15360 1455 aa7.94□□□□□ -1.14
SPATA9-202ENST00000316087 WDR63Q8IWG1 891 aa7.94□□□□□ -1.14
SPATA9-202ENST00000316087 CLUAP1Q96AJ1 413 aa7.94□□□□□ -1.14
SPATA9-202ENST00000316087 OTUD5Q96G74 571 aa7.94□□□□□ -1.14
SPATA9-202ENST00000316087 CFAP53Q96M91 514 aa7.94□□□□□ -1.14
SPATA9-202ENST00000316087 GPBP1L1Q9HC44 474 aaPredicted RBP7.94□□□□□ -1.14
SPATA9-202ENST00000316087 ATP7AQ04656 1500 aa7.94□□□□□ -1.14
SPATA9-202ENST00000316087 LMTK2Q8IWU2 1503 aa7.94□□□□□ -1.14
SPATA9-202ENST00000316087 NRXN1Q9ULB1 1477 aa7.94□□□□□ -1.14
SPATA9-202ENST00000316087 MKRN3Q13064 507 aaKnown RBP7.93□□□□□ -1.14
SPATA9-202ENST00000316087 ZMYND10O75800 440 aa7.93□□□□□ -1.14
SPATA9-202ENST00000316087 FAM43AQ8N2R8 423 aa7.93□□□□□ -1.14
SPATA9-202ENST00000316087 RUNDC1Q96C34 613 aa7.93□□□□□ -1.14
SPATA9-202ENST00000316087 RWDD1Q9H446 243 aaPredicted RBP7.93□□□□□ -1.14
SPATA9-202ENST00000316087 MYH16Q9H6N6 1097 aa7.93□□□□□ -1.14
SPATA9-202ENST00000316087 ISY1Q9ULR0 285 aaKnown RBP7.93□□□□□ -1.14
SPATA9-202ENST00000316087 RPGRIP1LQ68CZ1 1315 aa7.92□□□□□ -1.14
SPATA9-202ENST00000316087 ERVK-7P63135 1459 aa7.92□□□□□ -1.14
SPATA9-202ENST00000316087 ABCA9Q8IUA7 1624 aa7.92□□□□□ -1.14
SPATA9-202ENST00000316087 EFCAB6Q5THR3 1501 aa7.92□□□□□ -1.14
SPATA9-202ENST00000316087 STK25O00506 426 aa7.92□□□□□ -1.14
SPATA9-202ENST00000316087 PTMSP20962 102 aa7.92□□□□□ -1.14
SPATA9-202ENST00000316087 CDK11BP21127 795 aaKnown RBP7.92□□□□□ -1.14
SPATA9-202ENST00000316087 RGS22Q8NE09 1264 aa7.92□□□□□ -1.14
SPATA9-202ENST00000316087 CHMP4BQ9H444 224 aaKnown RBP7.92□□□□□ -1.14
SPATA9-202ENST00000316087 ABCA6Q8N139 1617 aa7.91□□□□□ -1.14
SPATA9-202ENST00000316087 CFAP74Q9C0B2 1584 aa7.91□□□□□ -1.14
SPATA9-202ENST00000316087 APAF1O14727 1248 aa7.91□□□□□ -1.14
SPATA9-202ENST00000316087 C20orf194Q5TEA3 1177 aa7.91□□□□□ -1.14
SPATA9-202ENST00000316087 PNNQ9H307 717 aaKnown RBP7.91□□□□□ -1.14
SPATA9-202ENST00000316087 POTEB2H3BUK9 544 aa7.9□□□□□ -1.14
SPATA9-202ENST00000316087 HMGB1P09429 215 aaKnown RBP7.9□□□□□ -1.14
SPATA9-202ENST00000316087 CCDC82Q8N4S0 544 aa7.9□□□□□ -1.14
SPATA9-202ENST00000316087 MTMR7Q9Y216 660 aa7.9□□□□□ -1.14
SPATA9-202ENST00000316087 TRAPPC8Q9Y2L5 1435 aa7.89□□□□□ -1.15
SPATA9-202ENST00000316087 ZC3H13Q5T200 1668 aaKnown RBP7.89□□□□□ -1.15
SPATA9-202ENST00000316087 RGS3P49796 1198 aa7.89□□□□□ -1.15
SPATA9-202ENST00000316087 WWC1Q8IX03 1113 aa7.89□□□□□ -1.15
SPATA9-202ENST00000316087 ADGRB3O60242 1522 aa7.88□□□□□ -1.15
SPATA9-202ENST00000316087 RIOK3O14730 519 aaKnown RBP7.88□□□□□ -1.15
SPATA9-202ENST00000316087 CADPS2Q86UW7 1296 aa7.88□□□□□ -1.15
SPATA9-202ENST00000316087 FRAT1Q92837 279 aaPredicted RBP7.88□□□□□ -1.15
SPATA9-202ENST00000316087 ABCC11Q96J66 1382 aa7.88□□□□□ -1.15
SPATA9-202ENST00000316087 SHPRHQ149N8 1683 aa7.88□□□□□ -1.15
SPATA9-202ENST00000316087 IQSEC2Q5JU85 1478 aa7.88□□□□□ -1.15
SPATA9-202ENST00000316087 MORC1Q86VD1 984 aa7.88□□□□□ -1.15
SPATA9-202ENST00000316087 ZNF428Q96B54 188 aa7.88□□□□□ -1.15
SPATA9-202ENST00000316087 QRICH2Q9H0J4 1663 aa7.87□□□□□ -1.15
SPATA9-202ENST00000316087 SENP3-EIF4A1A0A087X0R7 540 aa7.87□□□□□ -1.15
SPATA9-202ENST00000316087 HSP90B1P14625 803 aaKnown RBP7.87□□□□□ -1.15
SPATA9-202ENST00000316087 AEBP1Q8IUX7 1158 aa7.87□□□□□ -1.15
SPATA9-202ENST00000316087 KIF16BQ96L93 1317 aa7.87□□□□□ -1.15
SPATA9-202ENST00000316087 ZNF518AQ6AHZ1 1483 aa7.87□□□□□ -1.15
SPATA9-202ENST00000316087 REREQ9P2R6 1566 aa7.86□□□□□ -1.15
SPATA9-202ENST00000316087 MROH1Q8NDA8 1641 aa7.86□□□□□ -1.15
SPATA9-202ENST00000316087 POTEMA6NI47 508 aa7.86□□□□□ -1.15
SPATA9-202ENST00000316087 MNX1P50219 401 aaPredicted RBP7.86□□□□□ -1.15
SPATA9-202ENST00000316087 RARSP54136 660 aaKnown RBP7.86□□□□□ -1.15
SPATA9-202ENST00000316087 TBC1D32Q96NH3 1257 aa7.86□□□□□ -1.15
SPATA9-202ENST00000316087 TRAIPQ9BWF2 469 aa7.86□□□□□ -1.15
SPATA9-202ENST00000316087 IL16Q14005 1332 aa7.86□□□□□ -1.15
SPATA9-202ENST00000316087 ADGRB2O60241 1585 aa7.86□□□□□ -1.15
SPATA9-202ENST00000316087 PPLO60437 1756 aa7.86□□□□□ -1.15
SPATA9-202ENST00000316087 DDX11L8A8MPP1 907 aa7.85□□□□□ -1.15
SPATA9-202ENST00000316087 SEMA3EO15041 775 aa7.85□□□□□ -1.15
SPATA9-202ENST00000316087 IPO8O15397 1037 aaKnown RBP7.85□□□□□ -1.15
SPATA9-202ENST00000316087 FRAT2O75474 233 aaPredicted RBP7.85□□□□□ -1.15
SPATA9-202ENST00000316087 BCAR3O75815 825 aa7.85□□□□□ -1.15
SPATA9-202ENST00000316087 RBM25P49756 843 aaKnown RBP7.85□□□□□ -1.15
SPATA9-202ENST00000316087 ZKSCAN2Q63HK3 967 aa7.85□□□□□ -1.15
SPATA9-202ENST00000316087 CCDC146Q8IYE0 955 aa7.85□□□□□ -1.15
SPATA9-202ENST00000316087 RYDENQ9NUL5 291 aaKnown RBP7.85□□□□□ -1.15
SPATA9-202ENST00000316087 DDX19BQ9UMR2 479 aa7.85□□□□□ -1.15
SPATA9-202ENST00000316087 NSD3Q9BZ95 1437 aa7.85□□□□□ -1.15
SPATA9-202ENST00000316087 MED14O60244 1454 aa7.84□□□□□ -1.15
SPATA9-202ENST00000316087 EVC2Q86UK5 1308 aa7.84□□□□□ -1.15
SPATA9-202ENST00000316087 TESPA1A2RU30 521 aaPredicted RBP7.84□□□□□ -1.15
SPATA9-202ENST00000316087 HDAC1Q13547 482 aaPredicted RBP7.84□□□□□ -1.15
SPATA9-202ENST00000316087 FOXD4L5Q5VV16 416 aaPredicted RBP7.84□□□□□ -1.15
SPATA9-202ENST00000316087 FTSJ3Q8IY81 847 aaKnown RBP7.84□□□□□ -1.15
SPATA9-202ENST00000316087 ANKRD36BQ8N2N9 1353 aa7.84□□□□□ -1.15
SPATA9-202ENST00000316087 FOXD4L4Q8WXT5 416 aaPredicted RBP7.84□□□□□ -1.15
SPATA9-202ENST00000316087 KDM4CQ9H3R0 1056 aa7.84□□□□□ -1.15
SPATA9-202ENST00000316087 PPRC1Q5VV67 1664 aaKnown RBP7.84□□□□□ -1.15
SPATA9-202ENST00000316087 NLRP1Q9C000 1473 aa7.84□□□□□ -1.15
SPATA9-202ENST00000316087 KIF3BO15066 747 aa7.84□□□□□ -1.15
SPATA9-202ENST00000316087 MVPQ14764 893 aaKnown RBP7.84□□□□□ -1.15
SPATA9-202ENST00000316087 BARGINQ6ZT62 677 aa7.84□□□□□ -1.15
SPATA9-202ENST00000316087 TCP11L2Q8N4U5 519 aa7.84□□□□□ -1.15
SPATA9-202ENST00000316087 C14orf93Q9H972 538 aaKnown RBP7.84□□□□□ -1.15
SPATA9-202ENST00000316087 CHMP5Q9NZZ3 219 aa7.84□□□□□ -1.15
SPATA9-202ENST00000316087 METRNQ9UJH8 293 aa7.84□□□□□ -1.15
SPATA9-202ENST00000316087 USP19O94966 1318 aa7.83□□□□□ -1.16
SPATA9-202ENST00000316087 IGHDP01880 384 aa7.83□□□□□ -1.16
SPATA9-202ENST00000316087 CALD1Q05682 793 aaKnown RBP7.83□□□□□ -1.16
SPATA9-202ENST00000316087 SKOR2Q2VWA4 1001 aaPredicted RBP7.83□□□□□ -1.16
SPATA9-202ENST00000316087 CFAP70Q5T0N1 1121 aa7.83□□□□□ -1.16
SPATA9-202ENST00000316087 POTEGQ6S5H5 508 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms