RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CRBNQ96SW2 442 aa9.92□□□□□ -0.82
TRIM55-202ENST00000315962 PPIP5K1Q6PFW1 1433 aa9.92□□□□□ -0.82
TRIM55-202ENST00000315962 SLFN5Q08AF3 891 aa9.92□□□□□ -0.82
TRIM55-202ENST00000315962 C14orf37Q86TY3 774 aa9.92□□□□□ -0.82
TRIM55-202ENST00000315962 TSR2Q969E8 191 aaKnown RBP9.92□□□□□ -0.82
TRIM55-202ENST00000315962 NEFMP07197 916 aa9.91□□□□□ -0.82
TRIM55-202ENST00000315962 POLKQ9UBT6 870 aa9.91□□□□□ -0.82
TRIM55-202ENST00000315962 CD163L1Q9NR16 1453 aa9.91□□□□□ -0.82
TRIM55-202ENST00000315962 REREQ9P2R6 1566 aa9.91□□□□□ -0.82
TRIM55-202ENST00000315962 RUNDC1Q96C34 613 aa9.91□□□□□ -0.82
TRIM55-202ENST00000315962 THUMPD2Q9BTF0 503 aaKnown RBP9.91□□□□□ -0.82
TRIM55-202ENST00000315962 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.91□□□□□ -0.82
TRIM55-202ENST00000315962 ACEP12821 1306 aa9.91□□□□□ -0.82
TRIM55-202ENST00000315962 ZNF521Q96K83 1311 aa9.9□□□□□ -0.82
TRIM55-202ENST00000315962 ADAMTS13Q76LX8 1427 aa9.9□□□□□ -0.82
TRIM55-202ENST00000315962 DIAPH1O60610 1272 aaKnown RBP9.89□□□□□ -0.83
TRIM55-202ENST00000315962 XPCQ01831 940 aaPredicted RBP9.89□□□□□ -0.83
TRIM55-202ENST00000315962 NGDNQ8NEJ9 315 aaKnown RBP9.89□□□□□ -0.83
TRIM55-202ENST00000315962 CLUAP1Q96AJ1 413 aa9.89□□□□□ -0.83
TRIM55-202ENST00000315962 POLR3AO14802 1390 aaPredicted RBP9.89□□□□□ -0.83
TRIM55-202ENST00000315962 MYO3AQ8NEV4 1616 aa9.89□□□□□ -0.83
TRIM55-202ENST00000315962 PTPRUQ92729 1446 aa9.89□□□□□ -0.83
TRIM55-202ENST00000315962 PHACTR3Q96KR7 559 aa9.89□□□□□ -0.83
TRIM55-202ENST00000315962 RNF123Q5XPI4 1314 aa9.89□□□□□ -0.83
TRIM55-202ENST00000315962 ZBTB7CA1YPR0 619 aa9.89□□□□□ -0.83
TRIM55-202ENST00000315962 PDE4AP27815 886 aa9.89□□□□□ -0.83
TRIM55-202ENST00000315962 COG3Q96JB2 828 aa9.89□□□□□ -0.83
TRIM55-202ENST00000315962 TNNQ9UQP3 1299 aa9.89□□□□□ -0.83
TRIM55-202ENST00000315962 ELL2O00472 640 aaPredicted RBP9.88□□□□□ -0.83
TRIM55-202ENST00000315962 PRKAR2BP31323 418 aa9.88□□□□□ -0.83
TRIM55-202ENST00000315962 PUS7Q96PZ0 661 aaKnown RBP9.88□□□□□ -0.83
TRIM55-202ENST00000315962 PHF23Q9BUL5 403 aaPredicted RBP9.88□□□□□ -0.83
TRIM55-202ENST00000315962 TCERG1O14776 1098 aaKnown RBP9.87□□□□□ -0.83
TRIM55-202ENST00000315962 CANXP27824 592 aaKnown RBP9.87□□□□□ -0.83
TRIM55-202ENST00000315962 RIPK4P57078 832 aa9.87□□□□□ -0.83
TRIM55-202ENST00000315962 MAPK8IP3Q9UPT6 1336 aa9.87□□□□□ -0.83
TRIM55-202ENST00000315962 PANK1Q8TE04 598 aa9.86□□□□□ -0.83
TRIM55-202ENST00000315962 E9PSI1 815 aa9.86□□□□□ -0.83
TRIM55-202ENST00000315962 DCTN1Q14203 1278 aa9.86□□□□□ -0.83
TRIM55-202ENST00000315962 HSP90AB2PQ58FF8 381 aa9.86□□□□□ -0.83
TRIM55-202ENST00000315962 LMOD2Q6P5Q4 547 aa9.86□□□□□ -0.83
TRIM55-202ENST00000315962 ANKLE2Q86XL3 938 aa9.86□□□□□ -0.83
TRIM55-202ENST00000315962 FAM83GA6ND36 823 aa9.86□□□□□ -0.83
TRIM55-202ENST00000315962 HSPA2P54652 639 aa9.86□□□□□ -0.83
TRIM55-202ENST00000315962 AEBP1Q8IUX7 1158 aa9.86□□□□□ -0.83
TRIM55-202ENST00000315962 NRXN3Q9Y4C0 1643 aa9.85□□□□□ -0.83
TRIM55-202ENST00000315962 TMPOP42166 694 aaKnown RBP9.85□□□□□ -0.83
TRIM55-202ENST00000315962 LTV1Q96GA3 475 aaPredicted RBP9.85□□□□□ -0.83
TRIM55-202ENST00000315962 PLEKHG1Q9ULL1 1385 aa9.85□□□□□ -0.83
TRIM55-202ENST00000315962 PLEKHF1Q96S99 279 aa9.85□□□□□ -0.83
TRIM55-202ENST00000315962 TBX22Q9Y458 520 aa9.85□□□□□ -0.83
TRIM55-202ENST00000315962 COG6Q9Y2V7 657 aa9.84□□□□□ -0.83
TRIM55-202ENST00000315962 TRIM35Q9UPQ4 493 aa9.84□□□□□ -0.83
TRIM55-202ENST00000315962 NLRP1Q9C000 1473 aa9.83□□□□□ -0.84
TRIM55-202ENST00000315962 ESCO1Q5FWF5 840 aa9.83□□□□□ -0.84
TRIM55-202ENST00000315962 TTC21BQ7Z4L5 1316 aa9.83□□□□□ -0.84
TRIM55-202ENST00000315962 NLRP6P59044 892 aa9.83□□□□□ -0.84
TRIM55-202ENST00000315962 CPS1P31327 1500 aa9.83□□□□□ -0.84
TRIM55-202ENST00000315962 UBR1Q8IWV7 1749 aa9.83□□□□□ -0.84
TRIM55-202ENST00000315962 NINLQ9Y2I6 1382 aa9.83□□□□□ -0.84
TRIM55-202ENST00000315962 EXOSC9Q06265 439 aaKnown RBP9.83□□□□□ -0.84
TRIM55-202ENST00000315962 TRMT2AQ8IZ69 625 aaKnown RBP9.83□□□□□ -0.84
TRIM55-202ENST00000315962 BRPF3Q9ULD4 1205 aa9.83□□□□□ -0.84
TRIM55-202ENST00000315962 FOXO3O43524 673 aa9.82□□□□□ -0.84
TRIM55-202ENST00000315962 SULT6B1Q6IMI4 303 aa9.82□□□□□ -0.84
TRIM55-202ENST00000315962 BACH2Q9BYV9 841 aa9.82□□□□□ -0.84
TRIM55-202ENST00000315962 C3P01024 1663 aa9.82□□□□□ -0.84
TRIM55-202ENST00000315962 NSD2O96028 1365 aa9.82□□□□□ -0.84
TRIM55-202ENST00000315962 RGS3P49796 1198 aa9.82□□□□□ -0.84
TRIM55-202ENST00000315962 ABTB2Q8N961 1025 aa9.82□□□□□ -0.84
TRIM55-202ENST00000315962 ZNF692Q9BU19 519 aaPredicted RBP9.82□□□□□ -0.84
TRIM55-202ENST00000315962 DDX17Q92841 729 aaKnown RBP9.81□□□□□ -0.84
TRIM55-202ENST00000315962 ORAI2Q96SN7 254 aa9.81□□□□□ -0.84
TRIM55-202ENST00000315962 CPSF1Q10570 1443 aaKnown RBP9.81□□□□□ -0.84
TRIM55-202ENST00000315962 RLBP1P12271 317 aa9.81□□□□□ -0.84
TRIM55-202ENST00000315962 IL13P35225 146 aa9.81□□□□□ -0.84
TRIM55-202ENST00000315962 RSPH6AQ9H0K4 717 aa9.81□□□□□ -0.84
TRIM55-202ENST00000315962 ATP7BP35670 1465 aa9.8□□□□□ -0.84
TRIM55-202ENST00000315962 RARSP54136 660 aaKnown RBP9.8□□□□□ -0.84
TRIM55-202ENST00000315962 MIS18AQ9NYP9 233 aa9.8□□□□□ -0.84
TRIM55-202ENST00000315962 FAM135BQ49AJ0 1406 aa9.8□□□□□ -0.84
TRIM55-202ENST00000315962 NKTRP30414 1462 aaKnown RBP9.8□□□□□ -0.84
TRIM55-202ENST00000315962 EIF4A2Q14240 407 aaKnown RBP9.79□□□□□ -0.84
TRIM55-202ENST00000315962 AMPHP49418 695 aa9.79□□□□□ -0.84
TRIM55-202ENST00000315962 MCM10Q7L590 875 aa9.79□□□□□ -0.84
TRIM55-202ENST00000315962 USHBP1Q8N6Y0 703 aa9.79□□□□□ -0.84
TRIM55-202ENST00000315962 EDC4Q6P2E9 1401 aaKnown RBP9.79□□□□□ -0.84
TRIM55-202ENST00000315962 FCHSD2O94868 740 aa9.79□□□□□ -0.84
TRIM55-202ENST00000315962 SIRT1Q96EB6 747 aa9.79□□□□□ -0.84
TRIM55-202ENST00000315962 DAXXQ9UER7 740 aaPredicted RBP9.79□□□□□ -0.84
TRIM55-202ENST00000315962 INSRP06213 1382 aa9.79□□□□□ -0.84
TRIM55-202ENST00000315962 FER1L4A9Z1Z3 1794 aa9.78□□□□□ -0.84
TRIM55-202ENST00000315962 PLEKHG3A1L390 1219 aa9.78□□□□□ -0.84
TRIM55-202ENST00000315962 SETD1AO15047 1707 aaKnown RBP9.78□□□□□ -0.84
TRIM55-202ENST00000315962 PSME1Q06323 249 aa9.78□□□□□ -0.84
TRIM55-202ENST00000315962 KRT24Q2M2I5 525 aa9.78□□□□□ -0.84
TRIM55-202ENST00000315962 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.78□□□□□ -0.84
TRIM55-202ENST00000315962 MAP3K19Q56UN5 1328 aa9.78□□□□□ -0.84
TRIM55-202ENST00000315962 WDR63Q8IWG1 891 aa9.78□□□□□ -0.84
TRIM55-202ENST00000315962 TSPYL6Q8N831 410 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms