RNA–Protein interactions for RNA: ENST00000315091.7

TARDBP-202, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-202ENST00000315091 ITSN1Q15811 1721 aa16.66■□□□□ 0.26
TARDBP-202ENST00000315091 USP6P35125 1406 aa16.65■□□□□ 0.26
TARDBP-202ENST00000315091 NGEFQ8N5V2 710 aa16.65■□□□□ 0.26
TARDBP-202ENST00000315091 ZRANB1Q9UGI0 708 aa16.65■□□□□ 0.26
TARDBP-202ENST00000315091 SSH2Q76I76 1423 aa16.65■□□□□ 0.26
TARDBP-202ENST00000315091 ANKARQ7Z5J8 1434 aa16.65■□□□□ 0.26
TARDBP-202ENST00000315091 NRKQ7Z2Y5 1582 aa16.64■□□□□ 0.26
TARDBP-202ENST00000315091 POLKQ9UBT6 870 aa16.64■□□□□ 0.25
TARDBP-202ENST00000315091 TTC21BQ7Z4L5 1316 aa16.64■□□□□ 0.25
TARDBP-202ENST00000315091 AATKQ6ZMQ8 1374 aa16.64■□□□□ 0.25
TARDBP-202ENST00000315091 FBLN1P23142 703 aa16.63■□□□□ 0.25
TARDBP-202ENST00000315091 IRX6P78412 446 aaPredicted RBP16.63■□□□□ 0.25
TARDBP-202ENST00000315091 RUNDC1Q96C34 613 aa16.63■□□□□ 0.25
TARDBP-202ENST00000315091 COG3Q96JB2 828 aa16.62■□□□□ 0.25
TARDBP-202ENST00000315091 IQSEC2Q5JU85 1478 aa16.62■□□□□ 0.25
TARDBP-202ENST00000315091 FMN2Q9NZ56 1722 aa16.61■□□□□ 0.25
TARDBP-202ENST00000315091 U2AF1L5P0DN76 240 aaPredicted RBP16.61■□□□□ 0.25
TARDBP-202ENST00000315091 U2AF1Q01081 240 aaKnown RBP eCLIP16.61■□□□□ 0.253e-7■■■□□ 15.3
TARDBP-202ENST00000315091 ERICH6BQ5W0A0 696 aa16.61■□□□□ 0.25
TARDBP-202ENST00000315091 PMFBP1Q8TBY8 1022 aa16.61■□□□□ 0.25
TARDBP-202ENST00000315091 GOLGA2Q08379 1002 aa16.6■□□□□ 0.25
TARDBP-202ENST00000315091 NALCNQ8IZF0 1738 aa16.6■□□□□ 0.25
TARDBP-202ENST00000315091 OVOS2A0A0J9YW53 1432 aa16.6■□□□□ 0.25
TARDBP-202ENST00000315091 OVOS2Q6IE36 1432 aa16.6■□□□□ 0.25
TARDBP-202ENST00000315091 NWD1Q149M9 1564 aa16.59■□□□□ 0.25
TARDBP-202ENST00000315091 DUSP27Q5VZP5 1158 aa16.59■□□□□ 0.25
TARDBP-202ENST00000315091 ADGRL3Q9HAR2 1447 aa16.59■□□□□ 0.25
TARDBP-202ENST00000315091 DIAPH1O60610 1272 aaKnown RBP16.59■□□□□ 0.25
TARDBP-202ENST00000315091 TRMT2AQ8IZ69 625 aaKnown RBP16.59■□□□□ 0.25
TARDBP-202ENST00000315091 TCP11L2Q8N4U5 519 aa16.59■□□□□ 0.25
TARDBP-202ENST00000315091 PHF23Q9BUL5 403 aaPredicted RBP16.59■□□□□ 0.25
TARDBP-202ENST00000315091 RCAN3Q9UKA8 241 aa16.59■□□□□ 0.25
TARDBP-202ENST00000315091 RGPD8O14715 1765 aaPredicted RBP16.58■□□□□ 0.24
TARDBP-202ENST00000315091 SLFN5Q08AF3 891 aa16.58■□□□□ 0.24
TARDBP-202ENST00000315091 RBM33Q96EV2 1170 aaKnown RBP16.58■□□□□ 0.24
TARDBP-202ENST00000315091 PLEKHF1Q96S99 279 aa16.58■□□□□ 0.24
TARDBP-202ENST00000315091 EMILIN1Q9Y6C2 1016 aa16.58■□□□□ 0.24
TARDBP-202ENST00000315091 TTC21AQ8NDW8 1320 aa16.58■□□□□ 0.24
TARDBP-202ENST00000315091 NCBP3Q53F19 620 aaKnown RBP16.57■□□□□ 0.24
TARDBP-202ENST00000315091 NGDNQ8NEJ9 315 aaKnown RBP16.57■□□□□ 0.24
TARDBP-202ENST00000315091 CDK12Q9NYV4 1490 aaPredicted RBP16.57■□□□□ 0.24
TARDBP-202ENST00000315091 KDM4FA0A1W2PPD8 638 aa16.56■□□□□ 0.24
TARDBP-202ENST00000315091 U2SURPO15042 1029 aaKnown RBP16.56■□□□□ 0.24
TARDBP-202ENST00000315091 WWC1Q8IX03 1113 aa16.56■□□□□ 0.24
TARDBP-202ENST00000315091 SPINK5Q9NQ38 1064 aaPredicted RBP16.56■□□□□ 0.24
TARDBP-202ENST00000315091 USP31Q70CQ4 1352 aa16.56■□□□□ 0.24
TARDBP-202ENST00000315091 DMRT2Q9Y5R5 561 aa16.56■□□□□ 0.24
TARDBP-202ENST00000315091 MAP2P11137 1827 aaKnown RBP16.56■□□□□ 0.24
TARDBP-202ENST00000315091 PPM1GO15355 546 aaPredicted RBP16.55■□□□□ 0.24
TARDBP-202ENST00000315091 RRS1Q15050 365 aaKnown RBP16.54■□□□□ 0.24
TARDBP-202ENST00000315091 CCDC27Q2M243 656 aa16.54■□□□□ 0.24
TARDBP-202ENST00000315091 RRP7AQ9Y3A4 280 aaKnown RBP16.54■□□□□ 0.24
TARDBP-202ENST00000315091 E9PSI1 815 aa16.53■□□□□ 0.24
TARDBP-202ENST00000315091 IL13P35225 146 aa16.53■□□□□ 0.24
TARDBP-202ENST00000315091 RRP1P56182 461 aaKnown RBP16.52■□□□□ 0.24
TARDBP-202ENST00000315091 FCHSD2O94868 740 aa16.52■□□□□ 0.23
TARDBP-202ENST00000315091 PHF8Q9UPP1 1060 aa16.52■□□□□ 0.23
TARDBP-202ENST00000315091 HSPA2P54652 639 aa16.51■□□□□ 0.23
TARDBP-202ENST00000315091 NEUROD2Q15784 382 aa16.51■□□□□ 0.23
TARDBP-202ENST00000315091 WDR63Q8IWG1 891 aa16.5■□□□□ 0.23
TARDBP-202ENST00000315091 PPP4R2Q9NY27 417 aa16.5■□□□□ 0.23
TARDBP-202ENST00000315091 PROSER2Q86WR7 435 aaPredicted RBP16.49■□□□□ 0.23
TARDBP-202ENST00000315091 RSPH6AQ9H0K4 717 aa16.49■□□□□ 0.23
TARDBP-202ENST00000315091 PNNQ9H307 717 aaKnown RBP16.49■□□□□ 0.23
TARDBP-202ENST00000315091 PIK3C2AO00443 1686 aa16.49■□□□□ 0.23
TARDBP-202ENST00000315091 TMPOP42166 694 aaKnown RBP16.49■□□□□ 0.23
TARDBP-202ENST00000315091 C14orf37Q86TY3 774 aa16.48■□□□□ 0.23
TARDBP-202ENST00000315091 LMTK3Q96Q04 1460 aa16.48■□□□□ 0.23
TARDBP-202ENST00000315091 LRRC7Q96NW7 1537 aa16.48■□□□□ 0.23
TARDBP-202ENST00000315091 MAPK8IP3Q9UPT6 1336 aa16.47■□□□□ 0.23
TARDBP-202ENST00000315091 PRKAR2BP31323 418 aa16.46■□□□□ 0.23
TARDBP-202ENST00000315091 ESCO1Q5FWF5 840 aa16.46■□□□□ 0.23
TARDBP-202ENST00000315091 TRIM35Q9UPQ4 493 aa16.46■□□□□ 0.23
TARDBP-202ENST00000315091 NLRP6P59044 892 aa16.45■□□□□ 0.22
TARDBP-202ENST00000315091 C19orf44Q9H6X5 657 aa16.45■□□□□ 0.22
TARDBP-202ENST00000315091 PEAK1Q9H792 1746 aa16.45■□□□□ 0.22
TARDBP-202ENST00000315091 MAP3K19Q56UN5 1328 aa16.45■□□□□ 0.22
TARDBP-202ENST00000315091 USP54Q70EL1 1684 aa16.45■□□□□ 0.22
TARDBP-202ENST00000315091 EIF4A2Q14240 407 aaKnown RBP16.45■□□□□ 0.22
TARDBP-202ENST00000315091 NCOA3Q9Y6Q9 1424 aa16.44■□□□□ 0.22
TARDBP-202ENST00000315091 HMOX1P09601 288 aa16.44■□□□□ 0.22
TARDBP-202ENST00000315091 ORAI2Q96SN7 254 aa16.44■□□□□ 0.22
TARDBP-202ENST00000315091 MARF1Q9Y4F3 1742 aaKnown RBP16.44■□□□□ 0.22
TARDBP-202ENST00000315091 STRCP1A6NGW2 1772 aa16.44■□□□□ 0.22
TARDBP-202ENST00000315091 HSP90AB2PQ58FF8 381 aa16.43■□□□□ 0.22
TARDBP-202ENST00000315091 TMEM94Q12767 1356 aa16.43■□□□□ 0.22
TARDBP-202ENST00000315091 ABTB2Q8N961 1025 aa16.42■□□□□ 0.22
TARDBP-202ENST00000315091 PHACTR3Q96KR7 559 aa16.42■□□□□ 0.22
TARDBP-202ENST00000315091 SBNO1A3KN83 1393 aa16.42■□□□□ 0.22
TARDBP-202ENST00000315091 C1orf167Q5SNV9 1468 aa16.42■□□□□ 0.22
TARDBP-202ENST00000315091 SOX12O15370 315 aa16.42■□□□□ 0.22
TARDBP-202ENST00000315091 PLIN1O60240 522 aa16.42■□□□□ 0.22
TARDBP-202ENST00000315091 RIPK4P57078 832 aa16.42■□□□□ 0.22
TARDBP-202ENST00000315091 PAK3O75914 559 aaPredicted RBP16.41■□□□□ 0.22
TARDBP-202ENST00000315091 PSME1Q06323 249 aa16.41■□□□□ 0.22
TARDBP-202ENST00000315091 NUTM2GQ5VZR2 741 aa16.41■□□□□ 0.22
TARDBP-202ENST00000315091 FLT4P35916 1363 aa16.41■□□□□ 0.22
TARDBP-202ENST00000315091 DCCP43146 1447 aa16.4■□□□□ 0.22
TARDBP-202ENST00000315091 NFE2L2Q16236 605 aa16.4■□□□□ 0.22
TARDBP-202ENST00000315091 B4GALNT3Q6L9W6 998 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms