RNA–Protein interactions for RNA: ENST00000314852.2

IMP3-201, Transcript of IMP3, U3 small nucleolar ribonucleoprotein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene IMP3, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP3-201ENST00000314852 PDZRN3Q9UPQ7 1066 aa23.68■■□□□ 1.38
IMP3-201ENST00000314852 TMPOP42166 694 aaKnown RBP23.67■■□□□ 1.38
IMP3-201ENST00000314852 PTPRMP28827 1452 aa23.66■■□□□ 1.38
IMP3-201ENST00000314852 NLRP1Q9C000 1473 aa23.65■■□□□ 1.38
IMP3-201ENST00000314852 SRPK2P78362 688 aaKnown RBP23.65■■□□□ 1.38
IMP3-201ENST00000314852 HDAC1Q13547 482 aaPredicted RBP23.65■■□□□ 1.38
IMP3-201ENST00000314852 MLECQ14165 292 aa23.65■■□□□ 1.38
IMP3-201ENST00000314852 PPP6R1Q9UPN7 881 aa23.65■■□□□ 1.38
IMP3-201ENST00000314852 TMEM131LA2VDJ0 1609 aa23.65■■□□□ 1.38
IMP3-201ENST00000314852 PNPLA6Q8IY17 1366 aa23.65■■□□□ 1.38
IMP3-201ENST00000314852 FTSJ3Q8IY81 847 aaKnown RBP23.64■■□□□ 1.38
IMP3-201ENST00000314852 DDX19BQ9UMR2 479 aa23.64■■□□□ 1.38
IMP3-201ENST00000314852 TBC1D32Q96NH3 1257 aa23.64■■□□□ 1.37
IMP3-201ENST00000314852 FYB1O15117 783 aa23.62■■□□□ 1.37
IMP3-201ENST00000314852 HDGFL2Q7Z4V5 671 aaPredicted RBP23.62■■□□□ 1.37
IMP3-201ENST00000314852 TRIM35Q9UPQ4 493 aa23.62■■□□□ 1.37
IMP3-201ENST00000314852 YTHDC2Q9H6S0 1430 aaKnown RBP23.62■■□□□ 1.37
IMP3-201ENST00000314852 PREX1Q8TCU6 1659 aa23.62■■□□□ 1.37
IMP3-201ENST00000314852 SEC24BO95487 1268 aa23.62■■□□□ 1.37
IMP3-201ENST00000314852 ZNF428Q96B54 188 aa23.62■■□□□ 1.37
IMP3-201ENST00000314852 IPO8O15397 1037 aaKnown RBP23.6■■□□□ 1.37
IMP3-201ENST00000314852 CD163L1Q9NR16 1453 aa23.6■■□□□ 1.37
IMP3-201ENST00000314852 BCL2L13Q9BXK5 485 aa23.6■■□□□ 1.37
IMP3-201ENST00000314852 SMC4Q9NTJ3 1288 aa23.6■■□□□ 1.37
IMP3-201ENST00000314852 EXOSC9Q06265 439 aaKnown RBP23.59■■□□□ 1.37
IMP3-201ENST00000314852 NUTM2DQ5VT03 806 aaPredicted RBP23.59■■□□□ 1.37
IMP3-201ENST00000314852 ATF7IPQ6VMQ6 1270 aa23.59■■□□□ 1.37
IMP3-201ENST00000314852 TNNQ9UQP3 1299 aa23.59■■□□□ 1.37
IMP3-201ENST00000314852 CDC42BPGQ6DT37 1551 aa23.59■■□□□ 1.37
IMP3-201ENST00000314852 U2SURPO15042 1029 aaKnown RBP23.59■■□□□ 1.37
IMP3-201ENST00000314852 DIAPH1O60610 1272 aaKnown RBP23.59■■□□□ 1.37
IMP3-201ENST00000314852 FRAT2O75474 233 aaPredicted RBP23.59■■□□□ 1.37
IMP3-201ENST00000314852 ALDH1L2Q3SY69 923 aa23.59■■□□□ 1.37
IMP3-201ENST00000314852 POGKQ9P215 609 aa23.59■■□□□ 1.37
IMP3-201ENST00000314852 KIF16BQ96L93 1317 aa23.58■■□□□ 1.37
IMP3-201ENST00000314852 FCHSD2O94868 740 aa23.58■■□□□ 1.37
IMP3-201ENST00000314852 GGNBP2Q9H3C7 697 aa23.58■■□□□ 1.37
IMP3-201ENST00000314852 BRPF1P55201 1214 aaPredicted RBP23.57■■□□□ 1.36
IMP3-201ENST00000314852 PRAM1Q96QH2 718 aa23.56■■□□□ 1.36
IMP3-201ENST00000314852 STK26Q9P289 416 aa23.56■■□□□ 1.36
IMP3-201ENST00000314852 TRIM27P14373 513 aa23.55■■□□□ 1.36
IMP3-201ENST00000314852 SSH1Q8WYL5 1049 aa23.55■■□□□ 1.36
IMP3-201ENST00000314852 DLC1Q96QB1 1528 aa23.55■■□□□ 1.36
IMP3-201ENST00000314852 SMC5Q8IY18 1101 aa23.55■■□□□ 1.36
IMP3-201ENST00000314852 RIPK4P57078 832 aa23.54■■□□□ 1.36
IMP3-201ENST00000314852 TSR2Q969E8 191 aaKnown RBP23.54■■□□□ 1.36
IMP3-201ENST00000314852 CHMP4BQ9H444 224 aaKnown RBP23.54■■□□□ 1.36
IMP3-201ENST00000314852 ALKQ9UM73 1620 aa23.54■■□□□ 1.36
IMP3-201ENST00000314852 MYO5BQ9ULV0 1848 aa23.54■■□□□ 1.36
IMP3-201ENST00000314852 SAFB2Q14151 953 aaKnown RBP eCLIP23.53■■□□□ 1.36
IMP3-201ENST00000314852 PPIP5K1Q6PFW1 1433 aa23.53■■□□□ 1.36
IMP3-201ENST00000314852 ANTXR1Q9H6X2 564 aa23.52■■□□□ 1.36
IMP3-201ENST00000314852 MINK1Q8N4C8 1332 aaPredicted RBP23.52■■□□□ 1.36
IMP3-201ENST00000314852 CALD1Q05682 793 aaKnown RBP23.52■■□□□ 1.36
IMP3-201ENST00000314852 ATP7BP35670 1465 aa23.51■■□□□ 1.35
IMP3-201ENST00000314852 KIF20BQ96Q89 1820 aa23.51■■□□□ 1.35
IMP3-201ENST00000314852 CDK19Q9BWU1 502 aa23.51■■□□□ 1.35
IMP3-201ENST00000314852 ZBTB40Q9NUA8 1239 aa23.5■■□□□ 1.35
IMP3-201ENST00000314852 NOB1Q9ULX3 412 aaKnown RBP23.5■■□□□ 1.35
IMP3-201ENST00000314852 ESF1Q9H501 851 aaKnown RBP23.49■■□□□ 1.35
IMP3-201ENST00000314852 ITPRIPQ8IWB1 547 aa23.49■■□□□ 1.35
IMP3-201ENST00000314852 IL27Q8NEV9 243 aa23.49■■□□□ 1.35
IMP3-201ENST00000314852 FBXO31Q5XUX0 539 aaPredicted RBP23.48■■□□□ 1.35
IMP3-201ENST00000314852 ARHGAP45Q92619 1136 aa23.47■■□□□ 1.35
IMP3-201ENST00000314852 TBC1D2Q9BYX2 928 aa23.47■■□□□ 1.35
IMP3-201ENST00000314852 FAM135BQ49AJ0 1406 aa23.46■■□□□ 1.35
IMP3-201ENST00000314852 CABP1Q9NZU7 370 aa23.45■■□□□ 1.35
IMP3-201ENST00000314852 TMEM57Q8N5G2 664 aa23.44■■□□□ 1.34
IMP3-201ENST00000314852 C22orf23Q9BZE7 217 aa23.44■■□□□ 1.34
IMP3-201ENST00000314852 RSPH6AQ9H0K4 717 aa23.44■■□□□ 1.34
IMP3-201ENST00000314852 FER1L4A9Z1Z3 1794 aa23.43■■□□□ 1.34
IMP3-201ENST00000314852 NUCB1Q02818 461 aa23.42■■□□□ 1.34
IMP3-201ENST00000314852 NFE2L2Q16236 605 aa23.42■■□□□ 1.34
IMP3-201ENST00000314852 POLKQ9UBT6 870 aa23.42■■□□□ 1.34
IMP3-201ENST00000314852 SPATA31D1Q6ZQQ2 1576 aa23.42■■□□□ 1.34
IMP3-201ENST00000314852 PIK3R4Q99570 1358 aa23.41■■□□□ 1.34
IMP3-201ENST00000314852 LRRC7Q96NW7 1537 aa23.4■■□□□ 1.34
IMP3-201ENST00000314852 STAG3Q9UJ98 1225 aa23.4■■□□□ 1.34
IMP3-201ENST00000314852 AATKQ6ZMQ8 1374 aa23.39■■□□□ 1.34
IMP3-201ENST00000314852 GNAI1P63096 354 aa23.39■■□□□ 1.34
IMP3-201ENST00000314852 SLKQ9H2G2 1235 aaPredicted RBP23.39■■□□□ 1.34
IMP3-201ENST00000314852 EDC4Q6P2E9 1401 aaKnown RBP23.38■■□□□ 1.33
IMP3-201ENST00000314852 GCC1Q96CN9 775 aa23.38■■□□□ 1.33
IMP3-201ENST00000314852 SIRT1Q96EB6 747 aa23.38■■□□□ 1.33
IMP3-201ENST00000314852 IFT57Q9NWB7 429 aa23.38■■□□□ 1.33
IMP3-201ENST00000314852 PRKAR2BP31323 418 aa23.38■■□□□ 1.33
IMP3-201ENST00000314852 LMOD3Q0VAK6 560 aa23.38■■□□□ 1.33
IMP3-201ENST00000314852 L1TD1Q5T7N2 865 aaKnown RBP23.38■■□□□ 1.33
IMP3-201ENST00000314852 CHMP5Q9NZZ3 219 aa23.38■■□□□ 1.33
IMP3-201ENST00000314852 CPSF1Q10570 1443 aaKnown RBP23.37■■□□□ 1.33
IMP3-201ENST00000314852 A2ML1A8K2U0 1454 aa23.37■■□□□ 1.33
IMP3-201ENST00000314852 EIF5BO60841 1220 aaKnown RBP23.37■■□□□ 1.33
IMP3-201ENST00000314852 RBM25P49756 843 aaKnown RBP23.37■■□□□ 1.33
IMP3-201ENST00000314852 BRPF3Q9ULD4 1205 aa23.37■■□□□ 1.33
IMP3-201ENST00000314852 PTCH1Q13635 1447 aa23.36■■□□□ 1.33
IMP3-201ENST00000314852 ADAMTSL3P82987 1691 aa23.36■■□□□ 1.33
IMP3-201ENST00000314852 CDK12Q9NYV4 1490 aaPredicted RBP23.35■■□□□ 1.33
IMP3-201ENST00000314852 C3P01024 1663 aa23.35■■□□□ 1.33
IMP3-201ENST00000314852 VAMP4O75379 141 aa23.35■■□□□ 1.33
IMP3-201ENST00000314852 ZNF853P0CG23 659 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms