RNA–Protein interactions for RNA: ENST00000314797.10

COPG1-201, Transcript of coatomer protein complex subunit gamma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPG1, Length 3,078 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-201ENST00000314797 PHF23Q9BUL5 403 aaPredicted RBP11.21□□□□□ -0.62
COPG1-201ENST00000314797 SLC26A8Q96RN1 970 aa11.2□□□□□ -0.62
COPG1-201ENST00000314797 MAP2P11137 1827 aaKnown RBP11.2□□□□□ -0.62
COPG1-201ENST00000314797 CFAP53Q96M91 514 aa11.2□□□□□ -0.62
COPG1-201ENST00000314797 ANKLE2Q86XL3 938 aa11.19□□□□□ -0.62
COPG1-201ENST00000314797 RGPD8O14715 1765 aaPredicted RBP11.19□□□□□ -0.62
COPG1-201ENST00000314797 BCANQ96GW7 911 aa11.19□□□□□ -0.62
COPG1-201ENST00000314797 CDK12Q9NYV4 1490 aaPredicted RBP11.19□□□□□ -0.62
COPG1-201ENST00000314797 USP6P35125 1406 aa11.18□□□□□ -0.62
COPG1-201ENST00000314797 CCDC27Q2M243 656 aa11.18□□□□□ -0.62
COPG1-201ENST00000314797 GGNBP2Q9H3C7 697 aa11.18□□□□□ -0.62
COPG1-201ENST00000314797 OVOS2A0A0J9YW53 1432 aa11.17□□□□□ -0.62
COPG1-201ENST00000314797 OVOS2Q6IE36 1432 aa11.17□□□□□ -0.62
COPG1-201ENST00000314797 NPHP4O75161 1426 aaPredicted RBP11.17□□□□□ -0.62
COPG1-201ENST00000314797 RUNDC1Q96C34 613 aa11.17□□□□□ -0.62
COPG1-201ENST00000314797 MARF1Q9Y4F3 1742 aaKnown RBP11.17□□□□□ -0.62
COPG1-201ENST00000314797 DAXXQ9UER7 740 aaPredicted RBP11.17□□□□□ -0.62
COPG1-201ENST00000314797 DUSP27Q5VZP5 1158 aa11.16□□□□□ -0.62
COPG1-201ENST00000314797 CDCA7LQ96GN5 454 aa11.16□□□□□ -0.62
COPG1-201ENST00000314797 SLFN5Q08AF3 891 aa11.16□□□□□ -0.62
COPG1-201ENST00000314797 PLEKHF1Q96S99 279 aa11.16□□□□□ -0.62
COPG1-201ENST00000314797 USP31Q70CQ4 1352 aa11.16□□□□□ -0.62
COPG1-201ENST00000314797 GOLGA2Q08379 1002 aa11.15□□□□□ -0.62
COPG1-201ENST00000314797 RCAN3Q9UKA8 241 aa11.15□□□□□ -0.63
COPG1-201ENST00000314797 PIK3C2AO00443 1686 aa11.14□□□□□ -0.63
COPG1-201ENST00000314797 APAF1O14727 1248 aa11.14□□□□□ -0.63
COPG1-201ENST00000314797 KCNA6P17658 529 aa11.14□□□□□ -0.63
COPG1-201ENST00000314797 TNNT2P45379 298 aaPredicted RBP11.14□□□□□ -0.63
COPG1-201ENST00000314797 POLKQ9UBT6 870 aa11.14□□□□□ -0.63
COPG1-201ENST00000314797 RGPD1P0DJD0 1748 aa11.14□□□□□ -0.63
COPG1-201ENST00000314797 NCKAP5LQ9HCH0 1330 aa11.14□□□□□ -0.63
COPG1-201ENST00000314797 PPP4R2Q9NY27 417 aa11.14□□□□□ -0.63
COPG1-201ENST00000314797 ACEP12821 1306 aa11.14□□□□□ -0.63
COPG1-201ENST00000314797 TTC21AQ8NDW8 1320 aa11.14□□□□□ -0.63
COPG1-201ENST00000314797 ADGRL3Q9HAR2 1447 aa11.13□□□□□ -0.63
COPG1-201ENST00000314797 CCDC146Q8IYE0 955 aa11.13□□□□□ -0.63
COPG1-201ENST00000314797 TTC21BQ7Z4L5 1316 aa11.13□□□□□ -0.63
COPG1-201ENST00000314797 RRP1P56182 461 aaKnown RBP11.12□□□□□ -0.63
COPG1-201ENST00000314797 WWC1Q8IX03 1113 aa11.12□□□□□ -0.63
COPG1-201ENST00000314797 E9PSI1 815 aa11.12□□□□□ -0.63
COPG1-201ENST00000314797 WDR63Q8IWG1 891 aa11.12□□□□□ -0.63
COPG1-201ENST00000314797 PEAK1Q9H792 1746 aa11.12□□□□□ -0.63
COPG1-201ENST00000314797 NME9Q86XW9 330 aa11.12□□□□□ -0.63
COPG1-201ENST00000314797 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.11□□□□□ -0.63
COPG1-201ENST00000314797 DIAPH1O60610 1272 aaKnown RBP11.1□□□□□ -0.63
COPG1-201ENST00000314797 TCP11L2Q8N4U5 519 aa11.1□□□□□ -0.63
COPG1-201ENST00000314797 PLPPR3Q6T4P5 718 aa11.1□□□□□ -0.63
COPG1-201ENST00000314797 COG3Q96JB2 828 aa11.1□□□□□ -0.63
COPG1-201ENST00000314797 PNNQ9H307 717 aaKnown RBP11.1□□□□□ -0.63
COPG1-201ENST00000314797 SENP3-EIF4A1A0A087X0R7 540 aa11.1□□□□□ -0.63
COPG1-201ENST00000314797 FCHSD2O94868 740 aa11.1□□□□□ -0.63
COPG1-201ENST00000314797 SALL2Q9Y467 1007 aaPredicted RBP11.1□□□□□ -0.63
COPG1-201ENST00000314797 PHRF1Q9P1Y6 1649 aaKnown RBP11.09□□□□□ -0.63
COPG1-201ENST00000314797 NCOA3Q9Y6Q9 1424 aa11.09□□□□□ -0.63
COPG1-201ENST00000314797 IL13P35225 146 aa11.09□□□□□ -0.63
COPG1-201ENST00000314797 SPINK5Q9NQ38 1064 aaPredicted RBP11.09□□□□□ -0.63
COPG1-201ENST00000314797 KIF24Q5T7B8 1368 aa11.08□□□□□ -0.64
COPG1-201ENST00000314797 U2AF1L5P0DN76 240 aaPredicted RBP11.08□□□□□ -0.64
COPG1-201ENST00000314797 U2AF1Q01081 240 aaKnown RBP eCLIP11.08□□□□□ -0.64
COPG1-201ENST00000314797 MST1RQ04912 1400 aa11.08□□□□□ -0.64
COPG1-201ENST00000314797 STRCP1A6NGW2 1772 aa11.08□□□□□ -0.64
COPG1-201ENST00000314797 KIF1AQ12756 1690 aa11.08□□□□□ -0.64
COPG1-201ENST00000314797 IRX6P78412 446 aaPredicted RBP11.07□□□□□ -0.64
COPG1-201ENST00000314797 DMRT2Q9Y5R5 561 aa11.07□□□□□ -0.64
COPG1-201ENST00000314797 IL16Q14005 1332 aa11.07□□□□□ -0.64
COPG1-201ENST00000314797 RSPH6AQ9H0K4 717 aa11.07□□□□□ -0.64
COPG1-201ENST00000314797 ZRANB1Q9UGI0 708 aa11.07□□□□□ -0.64
COPG1-201ENST00000314797 TRPM3Q9HCF6 1732 aaPredicted RBP11.06□□□□□ -0.64
COPG1-201ENST00000314797 EMILIN1Q9Y6C2 1016 aa11.05□□□□□ -0.64
COPG1-201ENST00000314797 DCCP43146 1447 aa11.05□□□□□ -0.64
COPG1-201ENST00000314797 TMPOP42166 694 aaKnown RBP11.05□□□□□ -0.64
COPG1-201ENST00000314797 TRIM35Q9UPQ4 493 aa11.05□□□□□ -0.64
COPG1-201ENST00000314797 DLG5Q8TDM6 1919 aa11.04□□□□□ -0.64
COPG1-201ENST00000314797 STRCQ7RTU9 1775 aa11.04□□□□□ -0.64
COPG1-201ENST00000314797 NFAT5O94916 1531 aa11.03□□□□□ -0.64
COPG1-201ENST00000314797 CT47B1P0C2W7 299 aaPredicted RBP11.03□□□□□ -0.64
COPG1-201ENST00000314797 SBNO1A3KN83 1393 aa11.03□□□□□ -0.64
COPG1-201ENST00000314797 FBLN1P23142 703 aa11.03□□□□□ -0.64
COPG1-201ENST00000314797 LMTK3Q96Q04 1460 aa11.02□□□□□ -0.64
COPG1-201ENST00000314797 U2SURPO15042 1029 aaKnown RBP11.02□□□□□ -0.65
COPG1-201ENST00000314797 SLIT3O75094 1523 aa11.02□□□□□ -0.65
COPG1-201ENST00000314797 XIRP1Q702N8 1843 aaKnown RBP11.02□□□□□ -0.65
COPG1-201ENST00000314797 NGDNQ8NEJ9 315 aaKnown RBP11.01□□□□□ -0.65
COPG1-201ENST00000314797 PMFBP1Q8TBY8 1022 aa11.01□□□□□ -0.65
COPG1-201ENST00000314797 MYH16Q9H6N6 1097 aa11.01□□□□□ -0.65
COPG1-201ENST00000314797 MAPK8IP3Q9UPT6 1336 aa11.01□□□□□ -0.65
COPG1-201ENST00000314797 ARHGEF10O15013 1369 aa11.01□□□□□ -0.65
COPG1-201ENST00000314797 FLT4P35916 1363 aa11.01□□□□□ -0.65
COPG1-201ENST00000314797 KDRP35968 1356 aa11.01□□□□□ -0.65
COPG1-201ENST00000314797 LTN1O94822 1766 aa11.01□□□□□ -0.65
COPG1-201ENST00000314797 RRS1Q15050 365 aaKnown RBP11.01□□□□□ -0.65
COPG1-201ENST00000314797 PHF8Q9UPP1 1060 aa11.01□□□□□ -0.65
COPG1-201ENST00000314797 RTL1A6NKG5 1358 aa11.01□□□□□ -0.65
COPG1-201ENST00000314797 ALS2Q96Q42 1657 aa11.01□□□□□ -0.65
COPG1-201ENST00000314797 RRP7AQ9Y3A4 280 aaKnown RBP11□□□□□ -0.65
COPG1-201ENST00000314797 NUTM2FA1L443 756 aa11□□□□□ -0.65
COPG1-201ENST00000314797 EIF4A2Q14240 407 aaKnown RBP11□□□□□ -0.65
COPG1-201ENST00000314797 NFE2L2Q16236 605 aa11□□□□□ -0.65
COPG1-201ENST00000314797 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.99□□□□□ -0.65
COPG1-201ENST00000314797 C1orf167Q5SNV9 1468 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms