RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 NFKBIBQ15653 356 aa7.65□□□□□ -1.19
PRKDC-201ENST00000314191 ZNF428Q96B54 188 aa7.65□□□□□ -1.19
PRKDC-201ENST00000314191 KIF21AQ7Z4S6 1674 aa7.65□□□□□ -1.19
PRKDC-201ENST00000314191 DMRT2Q9Y5R5 561 aa7.65□□□□□ -1.19
PRKDC-201ENST00000314191 EVA1CP58658 441 aa7.64□□□□□ -1.19
PRKDC-201ENST00000314191 POLKQ9UBT6 870 aa7.64□□□□□ -1.19
PRKDC-201ENST00000314191 USHBP1Q8N6Y0 703 aa7.64□□□□□ -1.19
PRKDC-201ENST00000314191 PTMAP06454 111 aaKnown RBP7.64□□□□□ -1.19
PRKDC-201ENST00000314191 GSE1Q14687 1217 aa7.64□□□□□ -1.19
PRKDC-201ENST00000314191 ANO2Q9NQ90 1003 aa7.64□□□□□ -1.19
PRKDC-201ENST00000314191 NEXNQ0ZGT2 675 aa7.64□□□□□ -1.19
PRKDC-201ENST00000314191 USP35Q9P2H5 1018 aa7.64□□□□□ -1.19
PRKDC-201ENST00000314191 DNMT1P26358 1616 aaKnown RBP7.64□□□□□ -1.19
PRKDC-201ENST00000314191 NPHP1O15259 732 aa7.64□□□□□ -1.19
PRKDC-201ENST00000314191 GNAI3P08754 354 aa7.64□□□□□ -1.19
PRKDC-201ENST00000314191 ANKRD36BQ8N2N9 1353 aa7.64□□□□□ -1.19
PRKDC-201ENST00000314191 LRPPRCP42704 1394 aaKnown RBP7.63□□□□□ -1.19
PRKDC-201ENST00000314191 UBTFL1P0CB47 393 aaPredicted RBP7.63□□□□□ -1.19
PRKDC-201ENST00000314191 TRIM27P14373 513 aa7.63□□□□□ -1.19
PRKDC-201ENST00000314191 GCC1Q96CN9 775 aa7.63□□□□□ -1.19
PRKDC-201ENST00000314191 FAM83GA6ND36 823 aa7.63□□□□□ -1.19
PRKDC-201ENST00000314191 TAF7LQ5H9L4 462 aa7.63□□□□□ -1.19
PRKDC-201ENST00000314191 PLEKHO1Q53GL0 409 aaPredicted RBP7.63□□□□□ -1.19
PRKDC-201ENST00000314191 TTC21BQ7Z4L5 1316 aa7.63□□□□□ -1.19
PRKDC-201ENST00000314191 HSP90AB2PQ58FF8 381 aa7.63□□□□□ -1.19
PRKDC-201ENST00000314191 ZNF530Q6P9A1 599 aaPredicted RBP7.63□□□□□ -1.19
PRKDC-201ENST00000314191 CHMP5Q9NZZ3 219 aa7.63□□□□□ -1.19
PRKDC-201ENST00000314191 F6X3S4 739 aa7.62□□□□□ -1.19
PRKDC-201ENST00000314191 ST18O60284 1047 aa7.62□□□□□ -1.19
PRKDC-201ENST00000314191 DDX58O95786 925 aaKnown RBP7.62□□□□□ -1.19
PRKDC-201ENST00000314191 L1TD1Q5T7N2 865 aaKnown RBP7.62□□□□□ -1.19
PRKDC-201ENST00000314191 PHF8Q9UPP1 1060 aa7.62□□□□□ -1.19
PRKDC-201ENST00000314191 KDM6BO15054 1643 aa7.62□□□□□ -1.19
PRKDC-201ENST00000314191 FOXO3O43524 673 aa7.62□□□□□ -1.19
PRKDC-201ENST00000314191 TNRQ92752 1358 aa7.62□□□□□ -1.19
PRKDC-201ENST00000314191 GOLGA6L4A6NEF3 574 aa7.62□□□□□ -1.19
PRKDC-201ENST00000314191 HDGFL1Q5TGJ6 251 aa7.62□□□□□ -1.19
PRKDC-201ENST00000314191 CHD1LQ86WJ1 897 aa7.62□□□□□ -1.19
PRKDC-201ENST00000314191 IFT57Q9NWB7 429 aa7.62□□□□□ -1.19
PRKDC-201ENST00000314191 ARHGEF12Q9NZN5 1544 aa7.62□□□□□ -1.19
PRKDC-201ENST00000314191 GOLGA6L3A6NEY3 463 aa7.62□□□□□ -1.19
PRKDC-201ENST00000314191 CDC45O75419 566 aa7.62□□□□□ -1.19
PRKDC-201ENST00000314191 POGZQ7Z3K3 1410 aa7.62□□□□□ -1.19
PRKDC-201ENST00000314191 FOXD4L6Q3SYB3 417 aaPredicted RBP7.62□□□□□ -1.19
PRKDC-201ENST00000314191 FOXD4L3Q6VB84 417 aaPredicted RBP7.62□□□□□ -1.19
PRKDC-201ENST00000314191 SURF6O75683 361 aaKnown RBP7.62□□□□□ -1.19
PRKDC-201ENST00000314191 NKTRP30414 1462 aaKnown RBP7.62□□□□□ -1.19
PRKDC-201ENST00000314191 REC8O95072 547 aa7.61□□□□□ -1.19
PRKDC-201ENST00000314191 NSD2O96028 1365 aa7.61□□□□□ -1.19
PRKDC-201ENST00000314191 IFIT2P09913 472 aaKnown RBP7.61□□□□□ -1.19
PRKDC-201ENST00000314191 INTS3Q68E01 1043 aaKnown RBP7.61□□□□□ -1.19
PRKDC-201ENST00000314191 RPAP2Q8IXW5 612 aaPredicted RBP7.61□□□□□ -1.19
PRKDC-201ENST00000314191 PCDHB15Q9Y5E8 787 aa7.61□□□□□ -1.19
PRKDC-201ENST00000314191 CTTNBP2Q8WZ74 1663 aa7.61□□□□□ -1.19
PRKDC-201ENST00000314191 NINLQ9Y2I6 1382 aa7.61□□□□□ -1.19
PRKDC-201ENST00000314191 SRCIN1Q9C0H9 1055 aa7.61□□□□□ -1.19
PRKDC-201ENST00000314191 POLR3AO14802 1390 aaPredicted RBP7.61□□□□□ -1.19
PRKDC-201ENST00000314191 COL17A1Q9UMD9 1497 aaPredicted RBP7.61□□□□□ -1.19
PRKDC-201ENST00000314191 RIC3Q7Z5B4 369 aa7.61□□□□□ -1.19
PRKDC-201ENST00000314191 PUS7Q96PZ0 661 aaKnown RBP7.61□□□□□ -1.19
PRKDC-201ENST00000314191 DDX49Q9Y6V7 483 aaKnown RBP7.61□□□□□ -1.19
PRKDC-201ENST00000314191 FRAT2O75474 233 aaPredicted RBP7.6□□□□□ -1.19
PRKDC-201ENST00000314191 RLBP1P12271 317 aa7.6□□□□□ -1.19
PRKDC-201ENST00000314191 GPATCH3Q96I76 525 aa7.6□□□□□ -1.19
PRKDC-201ENST00000314191 PLA2R1Q13018 1463 aa7.6□□□□□ -1.19
PRKDC-201ENST00000314191 DIAPH3Q9NSV4 1193 aa7.6□□□□□ -1.19
PRKDC-201ENST00000314191 AEBP1Q8IUX7 1158 aa7.6□□□□□ -1.19
PRKDC-201ENST00000314191 ZRSR1Q15695 479 aaKnown RBP7.6□□□□□ -1.19
PRKDC-201ENST00000314191 ABCA8O94911 1581 aa7.6□□□□□ -1.19
PRKDC-201ENST00000314191 GNAI2P04899 355 aa7.6□□□□□ -1.19
PRKDC-201ENST00000314191 ABCC11Q96J66 1382 aa7.6□□□□□ -1.19
PRKDC-201ENST00000314191 RIMS2Q9UQ26 1411 aa7.6□□□□□ -1.19
PRKDC-201ENST00000314191 SYTL4Q96C24 671 aaPredicted RBP7.6□□□□□ -1.19
PRKDC-201ENST00000314191 A0A1W2PP64 1363 aa7.6□□□□□ -1.19
PRKDC-201ENST00000314191 DDX54Q8TDD1 881 aaKnown RBP7.6□□□□□ -1.19
PRKDC-201ENST00000314191 MBIPQ9NS73 344 aa7.6□□□□□ -1.19
PRKDC-201ENST00000314191 G3BP1Q13283 466 aaKnown RBP eCLIP7.6□□□□□ -1.193e-7■■■□□ 17.6
PRKDC-201ENST00000314191 UHRF1BP1LA0JNW5 1464 aa7.59□□□□□ -1.19
PRKDC-201ENST00000314191 PHACTR3Q96KR7 559 aa7.59□□□□□ -1.19
PRKDC-201ENST00000314191 GNAT3A8MTJ3 354 aa7.59□□□□□ -1.19
PRKDC-201ENST00000314191 ALDH1L2Q3SY69 923 aa7.59□□□□□ -1.19
PRKDC-201ENST00000314191 TATP17735 454 aaPredicted RBP7.59□□□□□ -1.19
PRKDC-201ENST00000314191 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.59□□□□□ -1.197e-7■■■□□ 16
PRKDC-201ENST00000314191 IL1RAPL2Q9NP60 686 aa7.59□□□□□ -1.19
PRKDC-201ENST00000314191 NPATQ14207 1427 aa7.59□□□□□ -1.19
PRKDC-201ENST00000314191 KRT24Q2M2I5 525 aa7.59□□□□□ -1.19
PRKDC-201ENST00000314191 HSP90AB4PQ58FF6 505 aa7.59□□□□□ -1.19
PRKDC-201ENST00000314191 PIK3C2GO75747 1445 aa7.59□□□□□ -1.2
PRKDC-201ENST00000314191 C8orf58Q8NAV2 365 aa7.58□□□□□ -1.2
PRKDC-201ENST00000314191 HSP90B1P14625 803 aaKnown RBP7.58□□□□□ -1.2
PRKDC-201ENST00000314191 YEATS2Q9ULM3 1422 aa7.58□□□□□ -1.2
PRKDC-201ENST00000314191 EIF4A2Q14240 407 aaKnown RBP7.58□□□□□ -1.2
PRKDC-201ENST00000314191 TSPYL6Q8N831 410 aa7.58□□□□□ -1.2
PRKDC-201ENST00000314191 EXOC6BQ9Y2D4 811 aa7.58□□□□□ -1.2
PRKDC-201ENST00000314191 ZMYM3Q14202 1370 aa7.58□□□□□ -1.2
PRKDC-201ENST00000314191 ASXL1Q8IXJ9 1541 aa7.58□□□□□ -1.2
PRKDC-201ENST00000314191 PTMSP20962 102 aa7.58□□□□□ -1.2
PRKDC-201ENST00000314191 CCT4P50991 539 aaKnown RBP7.58□□□□□ -1.2
PRKDC-201ENST00000314191 SMARCA5O60264 1052 aaPredicted RBP7.58□□□□□ -1.2
PRKDC-201ENST00000314191 DNTTIP2Q5QJE6 756 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms