RNA–Protein interactions for RNA: ENST00000312635.10

USP15-202, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 1 (best) BASIC

Gene USP15, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-202ENST00000312635 NPHP3Q7Z494 1330 aa12.3□□□□□ -0.44
USP15-202ENST00000312635 FYB1O15117 783 aa12.3□□□□□ -0.44
USP15-202ENST00000312635 MYBBP1AQ9BQG0 1328 aaKnown RBP12.3□□□□□ -0.44
USP15-202ENST00000312635 BRINP3Q76B58 766 aa12.29□□□□□ -0.44
USP15-202ENST00000312635 MORC1Q86VD1 984 aa12.29□□□□□ -0.44
USP15-202ENST00000312635 TOM1O60784 492 aa12.29□□□□□ -0.44
USP15-202ENST00000312635 SCAF1Q9H7N4 1312 aaKnown RBP12.29□□□□□ -0.44
USP15-202ENST00000312635 USP31Q70CQ4 1352 aa12.29□□□□□ -0.44
USP15-202ENST00000312635 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.28□□□□□ -0.44
USP15-202ENST00000312635 SBNO1A3KN83 1393 aa12.28□□□□□ -0.44
USP15-202ENST00000312635 FOXO3O43524 673 aa12.27□□□□□ -0.44
USP15-202ENST00000312635 KRT28Q7Z3Y7 464 aa12.27□□□□□ -0.44
USP15-202ENST00000312635 KIF20BQ96Q89 1820 aa12.27□□□□□ -0.45
USP15-202ENST00000312635 CERKQ8TCT0 537 aa12.27□□□□□ -0.45
USP15-202ENST00000312635 COG3Q96JB2 828 aa12.27□□□□□ -0.45
USP15-202ENST00000312635 ANKRD26Q9UPS8 1709 aa12.27□□□□□ -0.45
USP15-202ENST00000312635 GGNBP2Q9H3C7 697 aa12.26□□□□□ -0.45
USP15-202ENST00000312635 NLRP13Q86W25 1043 aa12.26□□□□□ -0.45
USP15-202ENST00000312635 NME9Q86XW9 330 aa12.26□□□□□ -0.45
USP15-202ENST00000312635 OVOS2A0A0J9YW53 1432 aa12.25□□□□□ -0.45
USP15-202ENST00000312635 OVOS2Q6IE36 1432 aa12.25□□□□□ -0.45
USP15-202ENST00000312635 PPP2R1AP30153 589 aa12.25□□□□□ -0.45
USP15-202ENST00000312635 USP54Q70EL1 1684 aa12.24□□□□□ -0.45
USP15-202ENST00000312635 AATKQ6ZMQ8 1374 aa12.24□□□□□ -0.45
USP15-202ENST00000312635 SOS2Q07890 1332 aaPredicted RBP12.24□□□□□ -0.45
USP15-202ENST00000312635 PXDNQ92626 1479 aa12.24□□□□□ -0.45
USP15-202ENST00000312635 TRPM3Q9HCF6 1732 aaPredicted RBP12.24□□□□□ -0.45
USP15-202ENST00000312635 PAK3O75914 559 aaPredicted RBP12.23□□□□□ -0.45
USP15-202ENST00000312635 CNGB1Q14028 1251 aaPredicted RBP12.23□□□□□ -0.45
USP15-202ENST00000312635 ABTB2Q8N961 1025 aa12.23□□□□□ -0.45
USP15-202ENST00000312635 NHSL1Q5SYE7 1610 aa12.22□□□□□ -0.45
USP15-202ENST00000312635 TNS3Q68CZ2 1445 aa12.22□□□□□ -0.45
USP15-202ENST00000312635 ARHGEF10O15013 1369 aa12.22□□□□□ -0.45
USP15-202ENST00000312635 AHDC1Q5TGY3 1603 aaPredicted RBP12.22□□□□□ -0.45
USP15-202ENST00000312635 PIK3C2AO00443 1686 aa12.22□□□□□ -0.45
USP15-202ENST00000312635 NLRP6P59044 892 aa12.22□□□□□ -0.45
USP15-202ENST00000312635 SPATA31A3Q5VYP0 1347 aa12.21□□□□□ -0.45
USP15-202ENST00000312635 UBAP1LF5GYI3 381 aa12.21□□□□□ -0.46
USP15-202ENST00000312635 KCNH5Q8NCM2 988 aa12.21□□□□□ -0.46
USP15-202ENST00000312635 ZRANB1Q9UGI0 708 aa12.21□□□□□ -0.46
USP15-202ENST00000312635 ROBO1Q9Y6N7 1651 aa12.2□□□□□ -0.46
USP15-202ENST00000312635 XPCQ01831 940 aaPredicted RBP12.2□□□□□ -0.46
USP15-202ENST00000312635 MRS2Q9HD23 443 aa12.2□□□□□ -0.46
USP15-202ENST00000312635 USP19O94966 1318 aa12.2□□□□□ -0.46
USP15-202ENST00000312635 ALS2Q96Q42 1657 aa12.2□□□□□ -0.46
USP15-202ENST00000312635 CFAP53Q96M91 514 aa12.19□□□□□ -0.46
USP15-202ENST00000312635 SMG6Q86US8 1419 aaKnown RBP12.19□□□□□ -0.46
USP15-202ENST00000312635 SLIT3O75094 1523 aa12.18□□□□□ -0.46
USP15-202ENST00000312635 DDX17Q92841 729 aaKnown RBP12.18□□□□□ -0.46
USP15-202ENST00000312635 LRRC59Q96AG4 307 aaKnown RBP12.18□□□□□ -0.46
USP15-202ENST00000312635 KIF24Q5T7B8 1368 aa12.18□□□□□ -0.46
USP15-202ENST00000312635 TNNT2P45379 298 aaPredicted RBP12.18□□□□□ -0.46
USP15-202ENST00000312635 MED1Q15648 1581 aaPredicted RBP12.18□□□□□ -0.46
USP15-202ENST00000312635 INSRP06213 1382 aa12.17□□□□□ -0.46
USP15-202ENST00000312635 MTHFSP49914 203 aa12.17□□□□□ -0.46
USP15-202ENST00000312635 LMOD2Q6P5Q4 547 aa12.17□□□□□ -0.46
USP15-202ENST00000312635 POLKQ9UBT6 870 aa12.17□□□□□ -0.46
USP15-202ENST00000312635 PNPLA6Q8IY17 1366 aa12.16□□□□□ -0.46
USP15-202ENST00000312635 MARF1Q9Y4F3 1742 aaKnown RBP12.16□□□□□ -0.46
USP15-202ENST00000312635 NUTM2GQ5VZR2 741 aa12.15□□□□□ -0.46
USP15-202ENST00000312635 CDK12Q9NYV4 1490 aaPredicted RBP12.15□□□□□ -0.46
USP15-202ENST00000312635 PIP4K2BP78356 416 aa12.15□□□□□ -0.46
USP15-202ENST00000312635 CCDC184Q52MB2 194 aa12.15□□□□□ -0.46
USP15-202ENST00000312635 RTL1A6NKG5 1358 aa12.15□□□□□ -0.46
USP15-202ENST00000312635 GCP02774 474 aa12.14□□□□□ -0.47
USP15-202ENST00000312635 NFAT5O94916 1531 aa12.14□□□□□ -0.47
USP15-202ENST00000312635 PNISRQ8TF01 805 aaKnown RBP12.14□□□□□ -0.47
USP15-202ENST00000312635 PHLPP1O60346 1717 aa12.13□□□□□ -0.47
USP15-202ENST00000312635 FLT4P35916 1363 aa12.13□□□□□ -0.47
USP15-202ENST00000312635 MAP3K19Q56UN5 1328 aa12.13□□□□□ -0.47
USP15-202ENST00000312635 NUDCQ9Y266 331 aa12.13□□□□□ -0.47
USP15-202ENST00000312635 EMILIN1Q9Y6C2 1016 aa12.13□□□□□ -0.47
USP15-202ENST00000312635 COL16A1Q07092 1604 aaPredicted RBP12.12□□□□□ -0.47
USP15-202ENST00000312635 RRS1Q15050 365 aaKnown RBP12.12□□□□□ -0.47
USP15-202ENST00000312635 ABCC6O95255 1503 aa12.12□□□□□ -0.47
USP15-202ENST00000312635 COL3A1P02461 1466 aaPredicted RBP12.12□□□□□ -0.47
USP15-202ENST00000312635 DIAPH1O60610 1272 aaKnown RBP12.11□□□□□ -0.47
USP15-202ENST00000312635 AMPHP49418 695 aa12.11□□□□□ -0.47
USP15-202ENST00000312635 WDR43Q15061 677 aaKnown RBP eCLIP12.11□□□□□ -0.47
USP15-202ENST00000312635 ARHGEF25Q86VW2 580 aa12.11□□□□□ -0.47
USP15-202ENST00000312635 COL22A1Q8NFW1 1626 aaPredicted RBP12.11□□□□□ -0.47
USP15-202ENST00000312635 PHRF1Q9P1Y6 1649 aaKnown RBP12.11□□□□□ -0.47
USP15-202ENST00000312635 CPDO75976 1380 aa12.11□□□□□ -0.47
USP15-202ENST00000312635 PPM1GO15355 546 aaPredicted RBP12.1□□□□□ -0.47
USP15-202ENST00000312635 FBLN1P23142 703 aa12.1□□□□□ -0.47
USP15-202ENST00000312635 IP6K1Q92551 441 aa12.1□□□□□ -0.47
USP15-202ENST00000312635 CRYBG1Q9Y4K1 1723 aa12.1□□□□□ -0.47
USP15-202ENST00000312635 SOX12O15370 315 aa12.1□□□□□ -0.47
USP15-202ENST00000312635 MAP2P11137 1827 aaKnown RBP12.09□□□□□ -0.47
USP15-202ENST00000312635 HOXC9P31274 260 aa12.09□□□□□ -0.47
USP15-202ENST00000312635 HAP1P54257 671 aaPredicted RBP12.09□□□□□ -0.47
USP15-202ENST00000312635 FAM9BQ8IZU0 186 aa12.09□□□□□ -0.47
USP15-202ENST00000312635 BLMP54132 1417 aaPredicted RBP12.08□□□□□ -0.47
USP15-202ENST00000312635 IL13P35225 146 aa12.08□□□□□ -0.48
USP15-202ENST00000312635 PNNQ9H307 717 aaKnown RBP12.08□□□□□ -0.48
USP15-202ENST00000312635 JCADQ9P266 1359 aa12.08□□□□□ -0.48
USP15-202ENST00000312635 PEAK1Q9H792 1746 aa12.08□□□□□ -0.48
USP15-202ENST00000312635 CABLES1Q8TDN4 633 aa12.07□□□□□ -0.48
USP15-202ENST00000312635 SHPRHQ149N8 1683 aa12.07□□□□□ -0.48
USP15-202ENST00000312635 ABCA3Q99758 1704 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms