RNA–Protein interactions for RNA: ENST00000312492.2

HOXC5-201, Transcript of homeobox C5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC5, Length 1,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5-201ENST00000312492 NME9Q86XW9 330 aa22.52■■□□□ 1.2
HOXC5-201ENST00000312492 COL3A1P02461 1466 aaPredicted RBP22.51■■□□□ 1.19
HOXC5-201ENST00000312492 USP6P35125 1406 aa22.5■■□□□ 1.19
HOXC5-201ENST00000312492 MAP2P11137 1827 aaKnown RBP22.5■■□□□ 1.19
HOXC5-201ENST00000312492 COG3Q96JB2 828 aa22.49■■□□□ 1.19
HOXC5-201ENST00000312492 TTC21BQ7Z4L5 1316 aa22.47■■□□□ 1.19
HOXC5-201ENST00000312492 APAF1O14727 1248 aa22.47■■□□□ 1.19
HOXC5-201ENST00000312492 ADGRL3Q9HAR2 1447 aa22.47■■□□□ 1.19
HOXC5-201ENST00000312492 NGEFQ8N5V2 710 aa22.46■■□□□ 1.19
HOXC5-201ENST00000312492 AATKQ6ZMQ8 1374 aa22.45■■□□□ 1.18
HOXC5-201ENST00000312492 PNPLA6Q8IY17 1366 aa22.45■■□□□ 1.18
HOXC5-201ENST00000312492 NGDNQ8NEJ9 315 aaKnown RBP22.45■■□□□ 1.18
HOXC5-201ENST00000312492 PMFBP1Q8TBY8 1022 aa22.45■■□□□ 1.18
HOXC5-201ENST00000312492 RUNDC1Q96C34 613 aa22.45■■□□□ 1.18
HOXC5-201ENST00000312492 CDCA7LQ96GN5 454 aa22.44■■□□□ 1.18
HOXC5-201ENST00000312492 ZRANB1Q9UGI0 708 aa22.44■■□□□ 1.18
HOXC5-201ENST00000312492 SSH2Q76I76 1423 aa22.43■■□□□ 1.18
HOXC5-201ENST00000312492 ZNF521Q96K83 1311 aa22.43■■□□□ 1.18
HOXC5-201ENST00000312492 U2AF1L5P0DN76 240 aaPredicted RBP22.43■■□□□ 1.18
HOXC5-201ENST00000312492 U2AF1Q01081 240 aaKnown RBP eCLIP22.43■■□□□ 1.18
HOXC5-201ENST00000312492 POLKQ9UBT6 870 aa22.43■■□□□ 1.18
HOXC5-201ENST00000312492 IQSEC2Q5JU85 1478 aa22.42■■□□□ 1.18
HOXC5-201ENST00000312492 TTC21AQ8NDW8 1320 aa22.42■■□□□ 1.18
HOXC5-201ENST00000312492 DIAPH1O60610 1272 aaKnown RBP22.42■■□□□ 1.18
HOXC5-201ENST00000312492 CDK12Q9NYV4 1490 aaPredicted RBP22.41■■□□□ 1.18
HOXC5-201ENST00000312492 OVOS2A0A0J9YW53 1432 aa22.41■■□□□ 1.18
HOXC5-201ENST00000312492 OVOS2Q6IE36 1432 aa22.41■■□□□ 1.18
HOXC5-201ENST00000312492 U2SURPO15042 1029 aaKnown RBP22.41■■□□□ 1.18
HOXC5-201ENST00000312492 GOLGA2Q08379 1002 aa22.4■■□□□ 1.18
HOXC5-201ENST00000312492 RBM33Q96EV2 1170 aaKnown RBP22.4■■□□□ 1.18
HOXC5-201ENST00000312492 PPM1GO15355 546 aaPredicted RBP22.39■■□□□ 1.17
HOXC5-201ENST00000312492 C14orf37Q86TY3 774 aa22.39■■□□□ 1.17
HOXC5-201ENST00000312492 FBLN1P23142 703 aa22.38■■□□□ 1.17
HOXC5-201ENST00000312492 IRX6P78412 446 aaPredicted RBP22.38■■□□□ 1.17
HOXC5-201ENST00000312492 KDM4FA0A1W2PPD8 638 aa22.38■■□□□ 1.17
HOXC5-201ENST00000312492 EMILIN1Q9Y6C2 1016 aa22.37■■□□□ 1.17
HOXC5-201ENST00000312492 PIK3C2AO00443 1686 aa22.37■■□□□ 1.17
HOXC5-201ENST00000312492 RNF123Q5XPI4 1314 aa22.37■■□□□ 1.17
HOXC5-201ENST00000312492 ERICH6BQ5W0A0 696 aa22.36■■□□□ 1.17
HOXC5-201ENST00000312492 TCP11L2Q8N4U5 519 aa22.36■■□□□ 1.17
HOXC5-201ENST00000312492 RCAN3Q9UKA8 241 aa22.36■■□□□ 1.17
HOXC5-201ENST00000312492 PROSER2Q86WR7 435 aaPredicted RBP22.35■■□□□ 1.17
HOXC5-201ENST00000312492 PHF8Q9UPP1 1060 aa22.34■■□□□ 1.17
HOXC5-201ENST00000312492 USP31Q70CQ4 1352 aa22.34■■□□□ 1.17
HOXC5-201ENST00000312492 HSPA2P54652 639 aa22.34■■□□□ 1.17
HOXC5-201ENST00000312492 PNNQ9H307 717 aaKnown RBP22.34■■□□□ 1.17
HOXC5-201ENST00000312492 LMTK3Q96Q04 1460 aa22.33■■□□□ 1.17
HOXC5-201ENST00000312492 RRS1Q15050 365 aaKnown RBP22.33■■□□□ 1.16
HOXC5-201ENST00000312492 USP54Q70EL1 1684 aa22.32■■□□□ 1.16
HOXC5-201ENST00000312492 SLFN5Q08AF3 891 aa22.32■■□□□ 1.16
HOXC5-201ENST00000312492 NCBP3Q53F19 620 aaKnown RBP22.32■■□□□ 1.16
HOXC5-201ENST00000312492 STRCP1A6NGW2 1772 aa22.32■■□□□ 1.16
HOXC5-201ENST00000312492 DUSP27Q5VZP5 1158 aa22.31■■□□□ 1.16
HOXC5-201ENST00000312492 WWC1Q8IX03 1113 aa22.31■■□□□ 1.16
HOXC5-201ENST00000312492 MAPK8IP3Q9UPT6 1336 aa22.31■■□□□ 1.16
HOXC5-201ENST00000312492 NEUROD2Q15784 382 aa22.31■■□□□ 1.16
HOXC5-201ENST00000312492 RRP7AQ9Y3A4 280 aaKnown RBP22.31■■□□□ 1.16
HOXC5-201ENST00000312492 LRRC7Q96NW7 1537 aa22.31■■□□□ 1.16
HOXC5-201ENST00000312492 E9PSI1 815 aa22.3■■□□□ 1.16
HOXC5-201ENST00000312492 PLEKHF1Q96S99 279 aa22.3■■□□□ 1.16
HOXC5-201ENST00000312492 CCDC27Q2M243 656 aa22.29■■□□□ 1.16
HOXC5-201ENST00000312492 ESCO1Q5FWF5 840 aa22.29■■□□□ 1.16
HOXC5-201ENST00000312492 MARF1Q9Y4F3 1742 aaKnown RBP22.28■■□□□ 1.16
HOXC5-201ENST00000312492 FCHSD2O94868 740 aa22.28■■□□□ 1.16
HOXC5-201ENST00000312492 IL13P35225 146 aa22.28■■□□□ 1.16
HOXC5-201ENST00000312492 TRMT2AQ8IZ69 625 aaKnown RBP22.28■■□□□ 1.16
HOXC5-201ENST00000312492 PHF23Q9BUL5 403 aaPredicted RBP22.28■■□□□ 1.16
HOXC5-201ENST00000312492 PEAK1Q9H792 1746 aa22.28■■□□□ 1.16
HOXC5-201ENST00000312492 STRCQ7RTU9 1775 aa22.27■■□□□ 1.16
HOXC5-201ENST00000312492 RRP1P56182 461 aaKnown RBP22.27■■□□□ 1.15
HOXC5-201ENST00000312492 KIF1AQ12756 1690 aa22.26■■□□□ 1.15
HOXC5-201ENST00000312492 WDR63Q8IWG1 891 aa22.25■■□□□ 1.15
HOXC5-201ENST00000312492 C19orf44Q9H6X5 657 aa22.25■■□□□ 1.15
HOXC5-201ENST00000312492 NCOA3Q9Y6Q9 1424 aa22.25■■□□□ 1.15
HOXC5-201ENST00000312492 PAK3O75914 559 aaPredicted RBP22.24■■□□□ 1.15
HOXC5-201ENST00000312492 NEFMP07197 916 aa22.24■■□□□ 1.15
HOXC5-201ENST00000312492 NLRP6P59044 892 aa22.24■■□□□ 1.15
HOXC5-201ENST00000312492 RSPH6AQ9H0K4 717 aa22.24■■□□□ 1.15
HOXC5-201ENST00000312492 SPINK5Q9NQ38 1064 aaPredicted RBP22.24■■□□□ 1.15
HOXC5-201ENST00000312492 DMRT2Q9Y5R5 561 aa22.24■■□□□ 1.15
HOXC5-201ENST00000312492 TMEM94Q12767 1356 aa22.23■■□□□ 1.15
HOXC5-201ENST00000312492 SOX12O15370 315 aa22.23■■□□□ 1.15
HOXC5-201ENST00000312492 TMPOP42166 694 aaKnown RBP22.23■■□□□ 1.15
HOXC5-201ENST00000312492 PELP1Q8IZL8 1130 aaKnown RBP22.23■■□□□ 1.15
HOXC5-201ENST00000312492 ABTB2Q8N961 1025 aa22.23■■□□□ 1.15
HOXC5-201ENST00000312492 PRKAR2BP31323 418 aa22.22■■□□□ 1.15
HOXC5-201ENST00000312492 PSME1Q06323 249 aa22.22■■□□□ 1.15
HOXC5-201ENST00000312492 PPP4R2Q9NY27 417 aa22.22■■□□□ 1.15
HOXC5-201ENST00000312492 DCCP43146 1447 aa22.22■■□□□ 1.15
HOXC5-201ENST00000312492 SBNO1A3KN83 1393 aa22.21■■□□□ 1.15
HOXC5-201ENST00000312492 C1orf167Q5SNV9 1468 aa22.21■■□□□ 1.15
HOXC5-201ENST00000312492 HMOX1P09601 288 aa22.2■■□□□ 1.14
HOXC5-201ENST00000312492 MAP3K19Q56UN5 1328 aa22.2■■□□□ 1.14
HOXC5-201ENST00000312492 AEBP2Q6ZN18 517 aaPredicted RBP22.2■■□□□ 1.14
HOXC5-201ENST00000312492 ORAI2Q96SN7 254 aa22.2■■□□□ 1.14
HOXC5-201ENST00000312492 FLT4P35916 1363 aa22.19■■□□□ 1.14
HOXC5-201ENST00000312492 ATF3P18847 181 aa22.19■■□□□ 1.14
HOXC5-201ENST00000312492 EIF4A2Q14240 407 aaKnown RBP22.19■■□□□ 1.14
HOXC5-201ENST00000312492 NUTM2GQ5VZR2 741 aa22.19■■□□□ 1.14
HOXC5-201ENST00000312492 RGPD1P0DJD0 1748 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms