RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 ARXQ96QS3 562 aa10.6□□□□□ -0.71
COL6A5-202ENST00000312481 FAM13BQ9NYF5 915 aa10.6□□□□□ -0.71
COL6A5-202ENST00000312481 DACH1Q9UI36 760 aa10.6□□□□□ -0.71
COL6A5-202ENST00000312481 REREQ9P2R6 1566 aa10.6□□□□□ -0.71
COL6A5-202ENST00000312481 SYNE3Q6ZMZ3 975 aa10.6□□□□□ -0.71
COL6A5-202ENST00000312481 PLCB2Q00722 1185 aa10.6□□□□□ -0.71
COL6A5-202ENST00000312481 SF3A1Q15459 793 aaKnown RBP10.59□□□□□ -0.71
COL6A5-202ENST00000312481 NFKBIBQ15653 356 aa10.59□□□□□ -0.71
COL6A5-202ENST00000312481 CCDC73Q6ZRK6 1079 aa10.59□□□□□ -0.71
COL6A5-202ENST00000312481 ZFYVE9O95405 1425 aa10.59□□□□□ -0.71
COL6A5-202ENST00000312481 NOC3LQ8WTT2 800 aaKnown RBP10.59□□□□□ -0.71
COL6A5-202ENST00000312481 TRIM29Q14134 588 aa10.59□□□□□ -0.71
COL6A5-202ENST00000312481 AMOTL1Q8IY63 956 aa10.59□□□□□ -0.71
COL6A5-202ENST00000312481 PLEKHG5O94827 1062 aa10.59□□□□□ -0.71
COL6A5-202ENST00000312481 SASS6Q6UVJ0 657 aa10.59□□□□□ -0.71
COL6A5-202ENST00000312481 CNTROBQ8N137 903 aa10.59□□□□□ -0.71
COL6A5-202ENST00000312481 ZSCAN31Q96LW9 406 aaPredicted RBP10.59□□□□□ -0.71
COL6A5-202ENST00000312481 ZNF396Q96N95 335 aaPredicted RBP10.59□□□□□ -0.71
COL6A5-202ENST00000312481 CFAP45Q9UL16 551 aa10.59□□□□□ -0.71
COL6A5-202ENST00000312481 POGZQ7Z3K3 1410 aa10.59□□□□□ -0.71
COL6A5-202ENST00000312481 SAFBQ15424 915 aaKnown RBP eCLIP10.58□□□□□ -0.72
COL6A5-202ENST00000312481 GTPBP4Q9BZE4 634 aaKnown RBP10.58□□□□□ -0.72
COL6A5-202ENST00000312481 CLASP1Q7Z460 1538 aa10.58□□□□□ -0.72
COL6A5-202ENST00000312481 TUBBP07437 444 aa10.58□□□□□ -0.72
COL6A5-202ENST00000312481 CCDC192P0DO97 292 aa10.58□□□□□ -0.72
COL6A5-202ENST00000312481 CCDC27Q2M243 656 aa10.58□□□□□ -0.72
COL6A5-202ENST00000312481 CREBRFQ8IUR6 639 aa10.58□□□□□ -0.72
COL6A5-202ENST00000312481 DDX11Q96FC9 970 aa10.58□□□□□ -0.72
COL6A5-202ENST00000312481 TRDNQ13061 729 aa10.57□□□□□ -0.72
COL6A5-202ENST00000312481 TMX4Q9H1E5 349 aaPredicted RBP10.57□□□□□ -0.72
COL6A5-202ENST00000312481 BRMS1Q9HCU9 246 aa10.57□□□□□ -0.72
COL6A5-202ENST00000312481 CRBNQ96SW2 442 aa10.57□□□□□ -0.72
COL6A5-202ENST00000312481 GOLGA6L9A6NEM1 432 aa10.57□□□□□ -0.72
COL6A5-202ENST00000312481 CTAGE5O15320 804 aa10.57□□□□□ -0.72
COL6A5-202ENST00000312481 AKAP17AQ02040 695 aaKnown RBP10.57□□□□□ -0.72
COL6A5-202ENST00000312481 EPB41L2O43491 1005 aaKnown RBP10.57□□□□□ -0.72
COL6A5-202ENST00000312481 EIF3JO75822 258 aaKnown RBP10.56□□□□□ -0.72
COL6A5-202ENST00000312481 PYM1Q9BRP8 204 aaKnown RBP10.56□□□□□ -0.72
COL6A5-202ENST00000312481 CDKL5O76039 1030 aa10.56□□□□□ -0.72
COL6A5-202ENST00000312481 TERF1P54274 439 aa10.56□□□□□ -0.72
COL6A5-202ENST00000312481 GORABQ5T7V8 394 aa10.56□□□□□ -0.72
COL6A5-202ENST00000312481 CBFA2T2O43439 604 aa10.56□□□□□ -0.72
COL6A5-202ENST00000312481 FCHSD2O94868 740 aa10.56□□□□□ -0.72
COL6A5-202ENST00000312481 ANKRD45Q5TZF3 282 aa10.56□□□□□ -0.72
COL6A5-202ENST00000312481 SPHKAPQ2M3C7 1700 aa10.56□□□□□ -0.72
COL6A5-202ENST00000312481 SMC3Q9UQE7 1217 aa10.56□□□□□ -0.72
COL6A5-202ENST00000312481 CEP89Q96ST8 783 aa10.55□□□□□ -0.72
COL6A5-202ENST00000312481 CCDC30Q5VVM6 783 aa10.55□□□□□ -0.72
COL6A5-202ENST00000312481 SMARCE1Q969G3 411 aa10.55□□□□□ -0.72
COL6A5-202ENST00000312481 GBP3Q9H0R5 595 aa10.55□□□□□ -0.72
COL6A5-202ENST00000312481 CEP152O94986 1710 aa10.55□□□□□ -0.72
COL6A5-202ENST00000312481 POLR3GO15318 223 aaPredicted RBP10.55□□□□□ -0.72
COL6A5-202ENST00000312481 ABCC5O15440 1437 aa10.55□□□□□ -0.72
COL6A5-202ENST00000312481 RAB11FIP3O75154 756 aa10.55□□□□□ -0.72
COL6A5-202ENST00000312481 SH2B1Q9NRF2 756 aaPredicted RBP10.55□□□□□ -0.72
COL6A5-202ENST00000312481 ADGRL1O94910 1474 aa10.55□□□□□ -0.72
COL6A5-202ENST00000312481 PREX2Q70Z35 1606 aa10.55□□□□□ -0.72
COL6A5-202ENST00000312481 C11orf95C9JLR9 678 aaPredicted RBP10.54□□□□□ -0.72
COL6A5-202ENST00000312481 C1orf141Q5JVX7 400 aa10.54□□□□□ -0.72
COL6A5-202ENST00000312481 RPAP2Q8IXW5 612 aaPredicted RBP10.54□□□□□ -0.72
COL6A5-202ENST00000312481 TRAK2O60296 914 aa10.54□□□□□ -0.72
COL6A5-202ENST00000312481 KINO60870 393 aaKnown RBP10.54□□□□□ -0.72
COL6A5-202ENST00000312481 ERLIN1O75477 346 aa10.54□□□□□ -0.72
COL6A5-202ENST00000312481 AMPHP49418 695 aa10.54□□□□□ -0.72
COL6A5-202ENST00000312481 MVPQ14764 893 aaKnown RBP10.54□□□□□ -0.72
COL6A5-202ENST00000312481 OLFM4Q6UX06 510 aa10.54□□□□□ -0.72
COL6A5-202ENST00000312481 ARHGAP45Q92619 1136 aa10.54□□□□□ -0.72
COL6A5-202ENST00000312481 PTPRCP08575 1304 aa10.54□□□□□ -0.72
COL6A5-202ENST00000312481 TET3O43151 1660 aa10.54□□□□□ -0.72
COL6A5-202ENST00000312481 ANKRD36BQ8N2N9 1353 aa10.54□□□□□ -0.72
COL6A5-202ENST00000312481 SART3Q15020 963 aaKnown RBP10.53□□□□□ -0.72
COL6A5-202ENST00000312481 ZSCAN30Q86W11 494 aa10.53□□□□□ -0.72
COL6A5-202ENST00000312481 HNRNPMP52272 730 aaKnown RBP eCLIP10.53□□□□□ -0.72
COL6A5-202ENST00000312481 ATF7IPQ6VMQ6 1270 aa10.53□□□□□ -0.72
COL6A5-202ENST00000312481 POTEB2H3BUK9 544 aa10.53□□□□□ -0.72
COL6A5-202ENST00000312481 PRIMPOLQ96LW4 560 aa10.53□□□□□ -0.72
COL6A5-202ENST00000312481 PRG4Q92954 1404 aaPredicted RBP10.53□□□□□ -0.72
COL6A5-202ENST00000312481 CDK13Q14004 1512 aaKnown RBP10.53□□□□□ -0.72
COL6A5-202ENST00000312481 TSPY26PQ9H489 355 aa10.53□□□□□ -0.72
COL6A5-202ENST00000312481 K7ELQ4 463 aaPredicted RBP10.52□□□□□ -0.72
COL6A5-202ENST00000312481 UVSSAQ2YD98 709 aa10.52□□□□□ -0.72
COL6A5-202ENST00000312481 PARD3Q8TEW0 1356 aa10.52□□□□□ -0.73
COL6A5-202ENST00000312481 TTC37Q6PGP7 1564 aa10.52□□□□□ -0.73
COL6A5-202ENST00000312481 HMGB1P09429 215 aaKnown RBP10.52□□□□□ -0.73
COL6A5-202ENST00000312481 ABCC2Q92887 1545 aa10.52□□□□□ -0.73
COL6A5-202ENST00000312481 GPATCH8Q9UKJ3 1502 aaKnown RBP10.52□□□□□ -0.73
COL6A5-202ENST00000312481 TTC21BQ7Z4L5 1316 aa10.52□□□□□ -0.73
COL6A5-202ENST00000312481 PPP2R1AP30153 589 aa10.52□□□□□ -0.73
COL6A5-202ENST00000312481 ANAPC15P60006 121 aa10.52□□□□□ -0.73
COL6A5-202ENST00000312481 FAM193AP78312 1265 aa10.51□□□□□ -0.73
COL6A5-202ENST00000312481 TEFQ10587 303 aa10.51□□□□□ -0.73
COL6A5-202ENST00000312481 TPD52L1Q16890 204 aaPredicted RBP10.51□□□□□ -0.73
COL6A5-202ENST00000312481 RUFY1Q96T51 708 aa10.51□□□□□ -0.73
COL6A5-202ENST00000312481 ZNHIT6Q9NWK9 470 aaKnown RBP10.51□□□□□ -0.73
COL6A5-202ENST00000312481 IFIT2P09913 472 aaKnown RBP10.51□□□□□ -0.73
COL6A5-202ENST00000312481 EXOC6Q8TAG9 804 aa10.51□□□□□ -0.73
COL6A5-202ENST00000312481 SCAND2PQ9GZW5 306 aaPredicted RBP10.51□□□□□ -0.73
COL6A5-202ENST00000312481 C9orf78Q9NZ63 289 aaPredicted RBP10.51□□□□□ -0.73
COL6A5-202ENST00000312481 ZNF518AQ6AHZ1 1483 aa10.51□□□□□ -0.73
COL6A5-202ENST00000312481 CLASRPQ8N2M8 674 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms