RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 PDCL3Q9H2J4 239 aa12.28□□□□□ -0.44
RBFOX1-201ENST00000311745 PRDM10Q9NQV6 1147 aa12.28□□□□□ -0.44
RBFOX1-201ENST00000311745 A0A1W2PP64 1363 aa12.27□□□□□ -0.45
RBFOX1-201ENST00000311745 AKAP12Q02952 1782 aa12.27□□□□□ -0.45
RBFOX1-201ENST00000311745 ABCC11Q96J66 1382 aa12.26□□□□□ -0.45
RBFOX1-201ENST00000311745 MON2Q7Z3U7 1717 aa12.26□□□□□ -0.45
RBFOX1-201ENST00000311745 MED14O60244 1454 aa12.26□□□□□ -0.45
RBFOX1-201ENST00000311745 SLC4A3P48751 1232 aa12.26□□□□□ -0.45
RBFOX1-201ENST00000311745 C20orf194Q5TEA3 1177 aa12.26□□□□□ -0.45
RBFOX1-201ENST00000311745 FTSJ3Q8IY81 847 aaKnown RBP12.26□□□□□ -0.45
RBFOX1-201ENST00000311745 ZNF830Q96NB3 372 aaPredicted RBP12.26□□□□□ -0.45
RBFOX1-201ENST00000311745 SLFN5Q08AF3 891 aa12.26□□□□□ -0.45
RBFOX1-201ENST00000311745 PLIN1O60240 522 aa12.25□□□□□ -0.45
RBFOX1-201ENST00000311745 CCDC146Q8IYE0 955 aa12.25□□□□□ -0.45
RBFOX1-201ENST00000311745 TOPAZ1Q8N9V7 1692 aa12.24□□□□□ -0.45
RBFOX1-201ENST00000311745 CDC42BPGQ6DT37 1551 aa12.24□□□□□ -0.45
RBFOX1-201ENST00000311745 CPS1P31327 1500 aa12.24□□□□□ -0.45
RBFOX1-201ENST00000311745 CABP2Q9NPB3 220 aa12.24□□□□□ -0.45
RBFOX1-201ENST00000311745 NRKQ7Z2Y5 1582 aa12.23□□□□□ -0.45
RBFOX1-201ENST00000311745 PPP6R1Q9UPN7 881 aa12.23□□□□□ -0.45
RBFOX1-201ENST00000311745 C3P01024 1663 aa12.23□□□□□ -0.45
RBFOX1-201ENST00000311745 RIMS2Q9UQ26 1411 aa12.23□□□□□ -0.45
RBFOX1-201ENST00000311745 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.22□□□□□ -0.45
RBFOX1-201ENST00000311745 ANP32BQ92688 251 aaKnown RBP12.21□□□□□ -0.45
RBFOX1-201ENST00000311745 EVC2Q86UK5 1308 aa12.21□□□□□ -0.45
RBFOX1-201ENST00000311745 NSD2O96028 1365 aa12.21□□□□□ -0.45
RBFOX1-201ENST00000311745 MAP2P11137 1827 aaKnown RBP12.21□□□□□ -0.45
RBFOX1-201ENST00000311745 NKTRP30414 1462 aaKnown RBP12.21□□□□□ -0.45
RBFOX1-201ENST00000311745 APAF1O14727 1248 aa12.21□□□□□ -0.45
RBFOX1-201ENST00000311745 DDRGK1Q96HY6 314 aa12.21□□□□□ -0.45
RBFOX1-201ENST00000311745 NINLQ9Y2I6 1382 aa12.21□□□□□ -0.46
RBFOX1-201ENST00000311745 E9PSI1 815 aa12.21□□□□□ -0.46
RBFOX1-201ENST00000311745 KDM2BQ8NHM5 1336 aa12.2□□□□□ -0.46
RBFOX1-201ENST00000311745 METP08581 1390 aa12.2□□□□□ -0.46
RBFOX1-201ENST00000311745 NCLP19338 710 aaKnown RBP12.2□□□□□ -0.46
RBFOX1-201ENST00000311745 WDR43Q15061 677 aaKnown RBP eCLIP12.2□□□□□ -0.46
RBFOX1-201ENST00000311745 C14orf37Q86TY3 774 aa12.2□□□□□ -0.46
RBFOX1-201ENST00000311745 TECPR2O15040 1411 aa12.2□□□□□ -0.46
RBFOX1-201ENST00000311745 PRAM1Q96QH2 718 aa12.19□□□□□ -0.46
RBFOX1-201ENST00000311745 CRBNQ96SW2 442 aa12.19□□□□□ -0.46
RBFOX1-201ENST00000311745 FRAT2O75474 233 aaPredicted RBP12.19□□□□□ -0.46
RBFOX1-201ENST00000311745 HOMEZQ8IX15 550 aa12.19□□□□□ -0.46
RBFOX1-201ENST00000311745 ZMYM3Q14202 1370 aa12.19□□□□□ -0.46
RBFOX1-201ENST00000311745 CDK11BP21127 795 aaKnown RBP12.19□□□□□ -0.46
RBFOX1-201ENST00000311745 SENP3Q9H4L4 574 aaPredicted RBP12.18□□□□□ -0.46
RBFOX1-201ENST00000311745 PNPLA6Q8IY17 1366 aa12.18□□□□□ -0.46
RBFOX1-201ENST00000311745 GOLGA2Q08379 1002 aa12.18□□□□□ -0.46
RBFOX1-201ENST00000311745 VIRMAQ69YN4 1812 aaKnown RBP12.18□□□□□ -0.46
RBFOX1-201ENST00000311745 ITSN1Q15811 1721 aa12.17□□□□□ -0.46
RBFOX1-201ENST00000311745 CPSF1Q10570 1443 aaKnown RBP12.17□□□□□ -0.46
RBFOX1-201ENST00000311745 SAFB2Q14151 953 aaKnown RBP eCLIP12.17□□□□□ -0.46
RBFOX1-201ENST00000311745 WWC1Q8IX03 1113 aa12.17□□□□□ -0.46
RBFOX1-201ENST00000311745 STK26Q9P289 416 aa12.17□□□□□ -0.46
RBFOX1-201ENST00000311745 ATP7BP35670 1465 aa12.17□□□□□ -0.46
RBFOX1-201ENST00000311745 CGNL1Q0VF96 1302 aa12.17□□□□□ -0.46
RBFOX1-201ENST00000311745 NALCNQ8IZF0 1738 aa12.17□□□□□ -0.46
RBFOX1-201ENST00000311745 MTHFSP49914 203 aa12.17□□□□□ -0.46
RBFOX1-201ENST00000311745 SKAP1Q86WV1 359 aa12.17□□□□□ -0.46
RBFOX1-201ENST00000311745 PLEKHF1Q96S99 279 aa12.17□□□□□ -0.46
RBFOX1-201ENST00000311745 FAM13BQ9NYF5 915 aa12.17□□□□□ -0.46
RBFOX1-201ENST00000311745 ADAMTS13Q76LX8 1427 aa12.16□□□□□ -0.46
RBFOX1-201ENST00000311745 FYB1O15117 783 aa12.16□□□□□ -0.46
RBFOX1-201ENST00000311745 MORC1Q86VD1 984 aa12.16□□□□□ -0.46
RBFOX1-201ENST00000311745 DLG5Q8TDM6 1919 aa12.16□□□□□ -0.46
RBFOX1-201ENST00000311745 MINK1Q8N4C8 1332 aaPredicted RBP12.15□□□□□ -0.46
RBFOX1-201ENST00000311745 ATAD2Q6PL18 1390 aa12.15□□□□□ -0.46
RBFOX1-201ENST00000311745 CLCN1P35523 988 aa12.15□□□□□ -0.46
RBFOX1-201ENST00000311745 MARF1Q9Y4F3 1742 aaKnown RBP12.15□□□□□ -0.46
RBFOX1-201ENST00000311745 CNPY4Q8N129 248 aa12.15□□□□□ -0.46
RBFOX1-201ENST00000311745 LRRC7Q96NW7 1537 aa12.14□□□□□ -0.47
RBFOX1-201ENST00000311745 TNNT2P45379 298 aaPredicted RBP12.14□□□□□ -0.47
RBFOX1-201ENST00000311745 FER1L4A9Z1Z3 1794 aa12.14□□□□□ -0.47
RBFOX1-201ENST00000311745 WAPLQ7Z5K2 1190 aa12.14□□□□□ -0.47
RBFOX1-201ENST00000311745 TMEM51Q9NW97 253 aa12.14□□□□□ -0.47
RBFOX1-201ENST00000311745 BCAR3O75815 825 aa12.13□□□□□ -0.47
RBFOX1-201ENST00000311745 TEX2Q8IWB9 1127 aa12.13□□□□□ -0.47
RBFOX1-201ENST00000311745 CDK19Q9BWU1 502 aa12.13□□□□□ -0.47
RBFOX1-201ENST00000311745 RGPD8O14715 1765 aaPredicted RBP12.13□□□□□ -0.47
RBFOX1-201ENST00000311745 RIMS1Q86UR5 1692 aaKnown RBP12.12□□□□□ -0.47
RBFOX1-201ENST00000311745 PEAK1Q9H792 1746 aa12.12□□□□□ -0.47
RBFOX1-201ENST00000311745 FAM135BQ49AJ0 1406 aa12.12□□□□□ -0.47
RBFOX1-201ENST00000311745 PTPRUQ92729 1446 aa12.12□□□□□ -0.47
RBFOX1-201ENST00000311745 RGPD1P0DJD0 1748 aa12.12□□□□□ -0.47
RBFOX1-201ENST00000311745 CCDC27Q2M243 656 aa12.12□□□□□ -0.47
RBFOX1-201ENST00000311745 DNTTIP2Q5QJE6 756 aaKnown RBP12.12□□□□□ -0.47
RBFOX1-201ENST00000311745 RUNDC1Q96C34 613 aa12.12□□□□□ -0.47
RBFOX1-201ENST00000311745 SLIT1O75093 1534 aa12.11□□□□□ -0.47
RBFOX1-201ENST00000311745 CERS3Q8IU89 383 aa12.11□□□□□ -0.47
RBFOX1-201ENST00000311745 ARHGAP23Q9P227 1491 aa12.11□□□□□ -0.47
RBFOX1-201ENST00000311745 PPP4R3BQ5MIZ7 849 aa12.11□□□□□ -0.47
RBFOX1-201ENST00000311745 TCP11L2Q8N4U5 519 aa12.11□□□□□ -0.47
RBFOX1-201ENST00000311745 GGNBP2Q9H3C7 697 aa12.1□□□□□ -0.47
RBFOX1-201ENST00000311745 POGKQ9P215 609 aa12.1□□□□□ -0.47
RBFOX1-201ENST00000311745 XRN1Q8IZH2 1706 aaKnown RBP12.1□□□□□ -0.47
RBFOX1-201ENST00000311745 TMEM2Q9UHN6 1383 aa12.1□□□□□ -0.47
RBFOX1-201ENST00000311745 TNRQ92752 1358 aa12.1□□□□□ -0.47
RBFOX1-201ENST00000311745 MLECQ14165 292 aa12.1□□□□□ -0.47
RBFOX1-201ENST00000311745 NGEFQ8N5V2 710 aa12.1□□□□□ -0.47
RBFOX1-201ENST00000311745 RRP7AQ9Y3A4 280 aaKnown RBP12.1□□□□□ -0.47
RBFOX1-201ENST00000311745 ROBO2Q9HCK4 1378 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms