RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 PTPRMP28827 1452 aa32.37■■■□□ 2.77
HOXB3-201ENST00000311626 WAPLQ7Z5K2 1190 aa32.36■■■□□ 2.77
HOXB3-201ENST00000311626 ARHGAP31Q2M1Z3 1444 aa32.36■■■□□ 2.77
HOXB3-201ENST00000311626 YTHDC2Q9H6S0 1430 aaKnown RBP32.36■■■□□ 2.77
HOXB3-201ENST00000311626 TRIM27P14373 513 aa32.35■■■□□ 2.77
HOXB3-201ENST00000311626 RTN4Q9NQC3 1192 aaKnown RBP32.35■■■□□ 2.77
HOXB3-201ENST00000311626 ITPRIPQ8IWB1 547 aa32.34■■■□□ 2.77
HOXB3-201ENST00000311626 CD163L1Q9NR16 1453 aa32.34■■■□□ 2.77
HOXB3-201ENST00000311626 NOB1Q9ULX3 412 aaKnown RBP32.33■■■□□ 2.77
HOXB3-201ENST00000311626 DIAPH1O60610 1272 aaKnown RBP32.33■■■□□ 2.77
HOXB3-201ENST00000311626 GSE1Q14687 1217 aa32.33■■■□□ 2.77
HOXB3-201ENST00000311626 CYB5RLQ6IPT4 315 aa32.32■■■□□ 2.77
HOXB3-201ENST00000311626 SLKQ9H2G2 1235 aaPredicted RBP32.32■■■□□ 2.77
HOXB3-201ENST00000311626 ADGRB2O60241 1585 aa32.32■■■□□ 2.76
HOXB3-201ENST00000311626 HDGFL2Q7Z4V5 671 aaPredicted RBP32.31■■■□□ 2.76
HOXB3-201ENST00000311626 COL3A1P02461 1466 aaPredicted RBP32.31■■■□□ 2.76
HOXB3-201ENST00000311626 ATAD2Q6PL18 1390 aa32.31■■■□□ 2.76
HOXB3-201ENST00000311626 RICTORQ6R327 1708 aa32.3■■■□□ 2.76
HOXB3-201ENST00000311626 TMEM131LA2VDJ0 1609 aa32.29■■■□□ 2.76
HOXB3-201ENST00000311626 ZFYVE9O95405 1425 aa32.29■■■□□ 2.76
HOXB3-201ENST00000311626 MLECQ14165 292 aa32.28■■■□□ 2.76
HOXB3-201ENST00000311626 VIRMAQ69YN4 1812 aaKnown RBP32.28■■■□□ 2.76
HOXB3-201ENST00000311626 PREX1Q8TCU6 1659 aa32.27■■■□□ 2.76
HOXB3-201ENST00000311626 TMEM57Q8N5G2 664 aa32.26■■■□□ 2.76
HOXB3-201ENST00000311626 NLRP1Q9C000 1473 aa32.26■■■□□ 2.75
HOXB3-201ENST00000311626 HMOX1P09601 288 aa32.26■■■□□ 2.75
HOXB3-201ENST00000311626 AAMPQ13685 434 aa32.25■■■□□ 2.75
HOXB3-201ENST00000311626 THUMPD2Q9BTF0 503 aaKnown RBP32.25■■■□□ 2.75
HOXB3-201ENST00000311626 ATF7IPQ6VMQ6 1270 aa32.25■■■□□ 2.75
HOXB3-201ENST00000311626 PRKAR2BP31323 418 aa32.23■■■□□ 2.75
HOXB3-201ENST00000311626 SPRYD3Q8NCJ5 442 aa32.23■■■□□ 2.75
HOXB3-201ENST00000311626 BRPF3Q9ULD4 1205 aa32.22■■■□□ 2.75
HOXB3-201ENST00000311626 NCBP3Q53F19 620 aaKnown RBP32.21■■■□□ 2.75
HOXB3-201ENST00000311626 ZRANB1Q9UGI0 708 aa32.21■■■□□ 2.75
HOXB3-201ENST00000311626 ALKQ9UM73 1620 aa32.2■■■□□ 2.75
HOXB3-201ENST00000311626 PHACTR3Q96KR7 559 aa32.2■■■□□ 2.74
HOXB3-201ENST00000311626 POLKQ9UBT6 870 aa32.2■■■□□ 2.74
HOXB3-201ENST00000311626 FAM69CQ0P6D2 419 aa32.19■■■□□ 2.74
HOXB3-201ENST00000311626 UPF2Q9HAU5 1272 aaKnown RBP32.19■■■□□ 2.74
HOXB3-201ENST00000311626 TBC1D32Q96NH3 1257 aa32.19■■■□□ 2.74
HOXB3-201ENST00000311626 BECN1Q14457 450 aa32.18■■■□□ 2.74
HOXB3-201ENST00000311626 CT47B1P0C2W7 299 aaPredicted RBP32.18■■■□□ 2.74
HOXB3-201ENST00000311626 NCKAP5LQ9HCH0 1330 aa32.17■■■□□ 2.74
HOXB3-201ENST00000311626 DDX19BQ9UMR2 479 aa32.17■■■□□ 2.74
HOXB3-201ENST00000311626 EMILIN1Q9Y6C2 1016 aa32.17■■■□□ 2.74
HOXB3-201ENST00000311626 ELL2O00472 640 aaPredicted RBP32.16■■■□□ 2.74
HOXB3-201ENST00000311626 MFAP1P55081 439 aaKnown RBP32.16■■■□□ 2.74
HOXB3-201ENST00000311626 ARHGEF40Q8TER5 1519 aa32.16■■■□□ 2.74
HOXB3-201ENST00000311626 RSPH6AQ9H0K4 717 aa32.14■■■□□ 2.74
HOXB3-201ENST00000311626 TBC1D2Q9BYX2 928 aa32.14■■■□□ 2.74
HOXB3-201ENST00000311626 NME9Q86XW9 330 aa32.13■■■□□ 2.73
HOXB3-201ENST00000311626 PNPLA6Q8IY17 1366 aa32.13■■■□□ 2.73
HOXB3-201ENST00000311626 IL16Q14005 1332 aa32.12■■■□□ 2.73
HOXB3-201ENST00000311626 FCHSD2O94868 740 aa32.12■■■□□ 2.73
HOXB3-201ENST00000311626 ZBTB40Q9NUA8 1239 aa32.11■■■□□ 2.73
HOXB3-201ENST00000311626 HDAC1Q13547 482 aaPredicted RBP32.1■■■□□ 2.73
HOXB3-201ENST00000311626 TSPYL6Q8N831 410 aa32.1■■■□□ 2.73
HOXB3-201ENST00000311626 TXNDC2Q86VQ3 553 aa32.09■■■□□ 2.73
HOXB3-201ENST00000311626 LRRC7Q96NW7 1537 aa32.09■■■□□ 2.73
HOXB3-201ENST00000311626 C1orf115Q9H7X2 142 aa32.08■■■□□ 2.73
HOXB3-201ENST00000311626 MED14O60244 1454 aa32.08■■■□□ 2.73
HOXB3-201ENST00000311626 ANKRD26Q9UPS8 1709 aa32.08■■■□□ 2.73
HOXB3-201ENST00000311626 LNPKQ9C0E8 428 aa32.07■■■□□ 2.72
HOXB3-201ENST00000311626 CLTCQ00610 1675 aaKnown RBP32.07■■■□□ 2.72
HOXB3-201ENST00000311626 PNNQ9H307 717 aaKnown RBP32.07■■■□□ 2.72
HOXB3-201ENST00000311626 RRS1Q15050 365 aaKnown RBP32.06■■■□□ 2.72
HOXB3-201ENST00000311626 IPO8O15397 1037 aaKnown RBP32.05■■■□□ 2.72
HOXB3-201ENST00000311626 ANTXR1Q9H6X2 564 aa32.04■■■□□ 2.72
HOXB3-201ENST00000311626 C22orf23Q9BZE7 217 aa32.04■■■□□ 2.72
HOXB3-201ENST00000311626 KIF16BQ96L93 1317 aa32.03■■■□□ 2.72
HOXB3-201ENST00000311626 SMC5Q8IY18 1101 aa32.03■■■□□ 2.72
HOXB3-201ENST00000311626 TSPOAP1O95153 1857 aa32.03■■■□□ 2.72
HOXB3-201ENST00000311626 RIMS2Q9UQ26 1411 aa32.02■■■□□ 2.72
HOXB3-201ENST00000311626 NFE2L2Q16236 605 aa32.02■■■□□ 2.72
HOXB3-201ENST00000311626 KIF20BQ96Q89 1820 aa32.02■■■□□ 2.72
HOXB3-201ENST00000311626 FAM135BQ49AJ0 1406 aa32.01■■■□□ 2.71
HOXB3-201ENST00000311626 A2ML1A8K2U0 1454 aa32.01■■■□□ 2.71
HOXB3-201ENST00000311626 FAM83GA6ND36 823 aa32■■■□□ 2.71
HOXB3-201ENST00000311626 VAMP4O75379 141 aa31.99■■■□□ 2.71
HOXB3-201ENST00000311626 DCTN1Q14203 1278 aa31.99■■■□□ 2.71
HOXB3-201ENST00000311626 ALDH1L2Q3SY69 923 aa31.98■■■□□ 2.71
HOXB3-201ENST00000311626 WASLO00401 505 aaPredicted RBP31.98■■■□□ 2.71
HOXB3-201ENST00000311626 IL13P35225 146 aa31.98■■■□□ 2.71
HOXB3-201ENST00000311626 METP08581 1390 aa31.98■■■□□ 2.71
HOXB3-201ENST00000311626 MAP2P11137 1827 aaKnown RBP31.98■■■□□ 2.71
HOXB3-201ENST00000311626 MBIPQ9NS73 344 aa31.97■■■□□ 2.71
HOXB3-201ENST00000311626 ZMYM3Q14202 1370 aa31.97■■■□□ 2.71
HOXB3-201ENST00000311626 PPIP5K1Q6PFW1 1433 aa31.97■■■□□ 2.71
HOXB3-201ENST00000311626 MRPL50Q8N5N7 158 aaKnown RBP31.96■■■□□ 2.71
HOXB3-201ENST00000311626 NUDT16Q96DE0 195 aaKnown RBP31.95■■■□□ 2.71
HOXB3-201ENST00000311626 NUCB1Q02818 461 aa31.95■■■□□ 2.7
HOXB3-201ENST00000311626 NUTM2FA1L443 756 aa31.94■■■□□ 2.7
HOXB3-201ENST00000311626 ANKRD45Q5TZF3 282 aa31.93■■■□□ 2.7
HOXB3-201ENST00000311626 C8orf58Q8NAV2 365 aa31.93■■■□□ 2.7
HOXB3-201ENST00000311626 ZBTB7BO15156 539 aaPredicted RBP31.92■■■□□ 2.7
HOXB3-201ENST00000311626 CHD1LQ86WJ1 897 aa31.92■■■□□ 2.7
HOXB3-201ENST00000311626 ARXQ96QS3 562 aa31.91■■■□□ 2.7
HOXB3-201ENST00000311626 COG3Q96JB2 828 aa31.9■■■□□ 2.7
HOXB3-201ENST00000311626 ATP7BP35670 1465 aa31.9■■■□□ 2.7
HOXB3-201ENST00000311626 GNAI1P63096 354 aa31.88■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms