RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 STAG3Q9UJ98 1225 aa22.62■■□□□ 1.21
SPSB4-201ENST00000310546 NINLQ9Y2I6 1382 aa22.61■■□□□ 1.21
SPSB4-201ENST00000310546 FOXD4L1Q9NU39 408 aa22.61■■□□□ 1.21
SPSB4-201ENST00000310546 STK26Q9P289 416 aa22.61■■□□□ 1.21
SPSB4-201ENST00000310546 NEURL4Q96JN8 1562 aa22.61■■□□□ 1.21
SPSB4-201ENST00000310546 HSP90AB1P08238 724 aaKnown RBP22.58■■□□□ 1.21
SPSB4-201ENST00000310546 SKOR2Q2VWA4 1001 aaPredicted RBP22.58■■□□□ 1.21
SPSB4-201ENST00000310546 WWC1Q8IX03 1113 aa22.58■■□□□ 1.21
SPSB4-201ENST00000310546 RARSP54136 660 aaKnown RBP22.58■■□□□ 1.21
SPSB4-201ENST00000310546 IFT172Q9UG01 1749 aa22.58■■□□□ 1.21
SPSB4-201ENST00000310546 CAMSAP1Q5T5Y3 1602 aa22.58■■□□□ 1.2
SPSB4-201ENST00000310546 NOS1P29475 1434 aa22.57■■□□□ 1.2
SPSB4-201ENST00000310546 SCAF11Q99590 1463 aaKnown RBP22.57■■□□□ 1.2
SPSB4-201ENST00000310546 AGLP35573 1532 aa22.56■■□□□ 1.2
SPSB4-201ENST00000310546 ZMYM3Q14202 1370 aa22.56■■□□□ 1.2
SPSB4-201ENST00000310546 PPP1R9BQ96SB3 815 aa22.56■■□□□ 1.2
SPSB4-201ENST00000310546 RRP7AQ9Y3A4 280 aaKnown RBP22.56■■□□□ 1.2
SPSB4-201ENST00000310546 MYOM2P54296 1465 aa22.55■■□□□ 1.2
SPSB4-201ENST00000310546 DDIT3P35638 169 aa22.55■■□□□ 1.2
SPSB4-201ENST00000310546 ADGRB3O60242 1522 aa22.55■■□□□ 1.2
SPSB4-201ENST00000310546 ESF1Q9H501 851 aaKnown RBP22.54■■□□□ 1.2
SPSB4-201ENST00000310546 MAP7D2Q96T17 732 aa22.54■■□□□ 1.2
SPSB4-201ENST00000310546 KIAA1210Q9ULL0 1709 aa22.54■■□□□ 1.2
SPSB4-201ENST00000310546 CEBPAP49715 358 aaPredicted RBP22.54■■□□□ 1.2
SPSB4-201ENST00000310546 PIK3C2GO75747 1445 aa22.53■■□□□ 1.2
SPSB4-201ENST00000310546 RAB3GAP1Q15042 981 aa22.53■■□□□ 1.2
SPSB4-201ENST00000310546 UQCRHLA0A096LP55 91 aa22.52■■□□□ 1.2
SPSB4-201ENST00000310546 UQCRHP07919 91 aa22.52■■□□□ 1.2
SPSB4-201ENST00000310546 XPCQ01831 940 aaPredicted RBP22.52■■□□□ 1.2
SPSB4-201ENST00000310546 AAMPQ13685 434 aa22.52■■□□□ 1.2
SPSB4-201ENST00000310546 PRDM10Q9NQV6 1147 aa22.52■■□□□ 1.2
SPSB4-201ENST00000310546 DDX49Q9Y6V7 483 aaKnown RBP22.51■■□□□ 1.19
SPSB4-201ENST00000310546 SMC5Q8IY18 1101 aa22.5■■□□□ 1.19
SPSB4-201ENST00000310546 ZHX1Q9UKY1 873 aaPredicted RBP22.5■■□□□ 1.19
SPSB4-201ENST00000310546 TERF1P54274 439 aa22.49■■□□□ 1.19
SPSB4-201ENST00000310546 CIZ1Q9ULV3 898 aaPredicted RBP22.49■■□□□ 1.19
SPSB4-201ENST00000310546 NRXN1Q9ULB1 1477 aa22.48■■□□□ 1.19
SPSB4-201ENST00000310546 SYNMO15061 1565 aa22.48■■□□□ 1.19
SPSB4-201ENST00000310546 PPLO60437 1756 aa22.48■■□□□ 1.19
SPSB4-201ENST00000310546 NCOA3Q9Y6Q9 1424 aa22.48■■□□□ 1.19
SPSB4-201ENST00000310546 FTSJ3Q8IY81 847 aaKnown RBP22.48■■□□□ 1.19
SPSB4-201ENST00000310546 GOLGA6L22H0YM25 854 aa22.47■■□□□ 1.19
SPSB4-201ENST00000310546 NCLP19338 710 aaKnown RBP22.47■■□□□ 1.19
SPSB4-201ENST00000310546 PTMSP20962 102 aa22.46■■□□□ 1.19
SPSB4-201ENST00000310546 ASXL1Q8IXJ9 1541 aa22.46■■□□□ 1.19
SPSB4-201ENST00000310546 SSFA2P28290 1259 aa22.46■■□□□ 1.19
SPSB4-201ENST00000310546 SNX21Q969T3 373 aa22.46■■□□□ 1.19
SPSB4-201ENST00000310546 MVPQ14764 893 aaKnown RBP22.45■■□□□ 1.18
SPSB4-201ENST00000310546 NGEFQ8N5V2 710 aa22.45■■□□□ 1.18
SPSB4-201ENST00000310546 ZC3H13Q5T200 1668 aaKnown RBP22.45■■□□□ 1.18
SPSB4-201ENST00000310546 CDCA8Q53HL2 280 aa22.45■■□□□ 1.18
SPSB4-201ENST00000310546 PIK3C2BO00750 1634 aa22.44■■□□□ 1.18
SPSB4-201ENST00000310546 TNNT2P45379 298 aaPredicted RBP22.44■■□□□ 1.18
SPSB4-201ENST00000310546 SMAP1Q8IYB5 467 aaPredicted RBP22.44■■□□□ 1.18
SPSB4-201ENST00000310546 CD2BP2O95400 341 aaKnown RBP22.43■■□□□ 1.18
SPSB4-201ENST00000310546 RBM25P49756 843 aaKnown RBP22.43■■□□□ 1.18
SPSB4-201ENST00000310546 ARHGAP31Q2M1Z3 1444 aa22.43■■□□□ 1.18
SPSB4-201ENST00000310546 NOL7Q9UMY1 257 aaKnown RBP22.42■■□□□ 1.18
SPSB4-201ENST00000310546 KLHL40Q2TBA0 621 aa22.41■■□□□ 1.18
SPSB4-201ENST00000310546 CAVIN1Q6NZI2 390 aaKnown RBP22.4■■□□□ 1.18
SPSB4-201ENST00000310546 VGFO15240 615 aaPredicted RBP22.4■■□□□ 1.18
SPSB4-201ENST00000310546 DZIP1LQ8IYY4 767 aaKnown RBP22.4■■□□□ 1.18
SPSB4-201ENST00000310546 TCP11L2Q8N4U5 519 aa22.39■■□□□ 1.18
SPSB4-201ENST00000310546 C14orf93Q9H972 538 aaKnown RBP22.39■■□□□ 1.18
SPSB4-201ENST00000310546 CLTCQ00610 1675 aaKnown RBP22.39■■□□□ 1.17
SPSB4-201ENST00000310546 ZBTB7CA1YPR0 619 aa22.39■■□□□ 1.17
SPSB4-201ENST00000310546 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.39■■□□□ 1.17
SPSB4-201ENST00000310546 RPGRIP1LQ68CZ1 1315 aa22.39■■□□□ 1.17
SPSB4-201ENST00000310546 ZNF500O60304 480 aaPredicted RBP22.38■■□□□ 1.17
SPSB4-201ENST00000310546 RBM42Q9BTD8 480 aaKnown RBP22.38■■□□□ 1.17
SPSB4-201ENST00000310546 MYOM1P52179 1685 aa22.38■■□□□ 1.17
SPSB4-201ENST00000310546 ZKSCAN2Q63HK3 967 aa22.38■■□□□ 1.17
SPSB4-201ENST00000310546 MTERF4Q7Z6M4 381 aaKnown RBP22.37■■□□□ 1.17
SPSB4-201ENST00000310546 ITPRIPQ8IWB1 547 aa22.37■■□□□ 1.17
SPSB4-201ENST00000310546 SLC52A1Q9NWF4 448 aa22.37■■□□□ 1.17
SPSB4-201ENST00000310546 DYNC1I1O14576 645 aa22.37■■□□□ 1.17
SPSB4-201ENST00000310546 BAG4O95429 457 aaKnown RBP22.37■■□□□ 1.17
SPSB4-201ENST00000310546 SLC12A5Q9H2X9 1139 aa22.37■■□□□ 1.17
SPSB4-201ENST00000310546 PREX1Q8TCU6 1659 aa22.37■■□□□ 1.17
SPSB4-201ENST00000310546 ERVK-7P63135 1459 aa22.37■■□□□ 1.17
SPSB4-201ENST00000310546 MYO5BQ9ULV0 1848 aa22.36■■□□□ 1.17
SPSB4-201ENST00000310546 KDM5AP29375 1690 aaKnown RBP22.36■■□□□ 1.17
SPSB4-201ENST00000310546 K7ELQ4 463 aaPredicted RBP22.36■■□□□ 1.17
SPSB4-201ENST00000310546 HS1BP3Q53T59 392 aa22.36■■□□□ 1.17
SPSB4-201ENST00000310546 MCTP1Q6DN14 999 aa22.36■■□□□ 1.17
SPSB4-201ENST00000310546 LNPKQ9C0E8 428 aa22.36■■□□□ 1.17
SPSB4-201ENST00000310546 SETBP1Q9Y6X0 1596 aa22.36■■□□□ 1.17
SPSB4-201ENST00000310546 RBSNQ9H1K0 784 aa22.36■■□□□ 1.17
SPSB4-201ENST00000310546 NEXMIFQ5QGS0 1516 aa22.35■■□□□ 1.17
SPSB4-201ENST00000310546 GAS2L2Q8NHY3 880 aa22.35■■□□□ 1.17
SPSB4-201ENST00000310546 PPP6R1Q9UPN7 881 aa22.35■■□□□ 1.17
SPSB4-201ENST00000310546 ZSCAN23Q3MJ62 389 aa22.34■■□□□ 1.17
SPSB4-201ENST00000310546 KIF2CQ99661 725 aa22.34■■□□□ 1.17
SPSB4-201ENST00000310546 ADGRB1O14514 1584 aa22.34■■□□□ 1.17
SPSB4-201ENST00000310546 CABP2Q9NPB3 220 aa22.34■■□□□ 1.17
SPSB4-201ENST00000310546 ZKSCAN5Q9Y2L8 839 aa22.34■■□□□ 1.17
SPSB4-201ENST00000310546 IBTKQ9P2D0 1353 aaPredicted RBP22.33■■□□□ 1.17
SPSB4-201ENST00000310546 MINK1Q8N4C8 1332 aaPredicted RBP22.33■■□□□ 1.17
SPSB4-201ENST00000310546 RUNDC1Q96C34 613 aa22.33■■□□□ 1.17
SPSB4-201ENST00000310546 FGD1P98174 961 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms