RNA–Protein interactions for RNA: ENST00000310325.9

CTSF-201, Transcript of cathepsin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSF, Length 2,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-201ENST00000310325 AKAP12Q02952 1782 aa29.85■■■□□ 2.37
CTSF-201ENST00000310325 ITSN1Q15811 1721 aa29.85■■■□□ 2.37
CTSF-201ENST00000310325 NUDT16Q96DE0 195 aaKnown RBP29.85■■■□□ 2.37
CTSF-201ENST00000310325 SLIT1O75093 1534 aa29.85■■■□□ 2.37
CTSF-201ENST00000310325 ROBO2Q9HCK4 1378 aa29.85■■■□□ 2.37
CTSF-201ENST00000310325 U2SURPO15042 1029 aaKnown RBP29.84■■■□□ 2.37
CTSF-201ENST00000310325 TRHP20396 242 aaPredicted RBP29.83■■■□□ 2.37
CTSF-201ENST00000310325 ARHGAP23Q9P227 1491 aa29.83■■■□□ 2.37
CTSF-201ENST00000310325 BCAR3O75815 825 aa29.81■■■□□ 2.36
CTSF-201ENST00000310325 PLEKHF1Q96S99 279 aa29.81■■■□□ 2.36
CTSF-201ENST00000310325 CCDC61Q9Y6R9 512 aa29.81■■■□□ 2.36
CTSF-201ENST00000310325 MAP2P11137 1827 aaKnown RBP29.81■■■□□ 2.36
CTSF-201ENST00000310325 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.81■■■□□ 2.36
CTSF-201ENST00000310325 DIAPH1O60610 1272 aaKnown RBP29.81■■■□□ 2.36
CTSF-201ENST00000310325 EID1Q9Y6B2 187 aa29.8■■■□□ 2.36
CTSF-201ENST00000310325 TOPAZ1Q8N9V7 1692 aa29.76■■■□□ 2.36
CTSF-201ENST00000310325 MAPK8IP3Q9UPT6 1336 aa29.76■■■□□ 2.35
CTSF-201ENST00000310325 POLKQ9UBT6 870 aa29.76■■■□□ 2.35
CTSF-201ENST00000310325 PRR36Q9H6K5 1346 aa29.75■■■□□ 2.35
CTSF-201ENST00000310325 TCERG1O14776 1098 aaKnown RBP29.74■■■□□ 2.35
CTSF-201ENST00000310325 MYH16Q9H6N6 1097 aa29.74■■■□□ 2.35
CTSF-201ENST00000310325 NCKAP5LQ9HCH0 1330 aa29.74■■■□□ 2.35
CTSF-201ENST00000310325 PTPRUQ92729 1446 aa29.74■■■□□ 2.35
CTSF-201ENST00000310325 PNNQ9H307 717 aaKnown RBP29.74■■■□□ 2.35
CTSF-201ENST00000310325 TMPOP42166 694 aaKnown RBP29.73■■■□□ 2.35
CTSF-201ENST00000310325 NME9Q86XW9 330 aa29.73■■■□□ 2.35
CTSF-201ENST00000310325 LRRC7Q96NW7 1537 aa29.72■■■□□ 2.35
CTSF-201ENST00000310325 SLC26A8Q96RN1 970 aa29.71■■■□□ 2.35
CTSF-201ENST00000310325 ZNF692Q9BU19 519 aaPredicted RBP29.71■■■□□ 2.35
CTSF-201ENST00000310325 AATKQ6ZMQ8 1374 aa29.71■■■□□ 2.35
CTSF-201ENST00000310325 DIP2AQ14689 1571 aa29.71■■■□□ 2.35
CTSF-201ENST00000310325 PLPPR3Q6T4P5 718 aa29.71■■■□□ 2.35
CTSF-201ENST00000310325 KDM2BQ8NHM5 1336 aa29.71■■■□□ 2.35
CTSF-201ENST00000310325 PDE3AQ14432 1141 aa29.7■■■□□ 2.34
CTSF-201ENST00000310325 NRKQ7Z2Y5 1582 aa29.7■■■□□ 2.34
CTSF-201ENST00000310325 CDK12Q9NYV4 1490 aaPredicted RBP29.69■■■□□ 2.34
CTSF-201ENST00000310325 RARSP54136 660 aaKnown RBP29.69■■■□□ 2.34
CTSF-201ENST00000310325 THEMISQ8N1K5 641 aaPredicted RBP29.69■■■□□ 2.34
CTSF-201ENST00000310325 PPM1GO15355 546 aaPredicted RBP29.68■■■□□ 2.34
CTSF-201ENST00000310325 FBLN1P23142 703 aa29.68■■■□□ 2.34
CTSF-201ENST00000310325 FCHSD2O94868 740 aa29.67■■■□□ 2.34
CTSF-201ENST00000310325 COG3Q96JB2 828 aa29.67■■■□□ 2.34
CTSF-201ENST00000310325 TBX22Q9Y458 520 aa29.67■■■□□ 2.34
CTSF-201ENST00000310325 CENPQQ7L2Z9 268 aaPredicted RBP29.67■■■□□ 2.34
CTSF-201ENST00000310325 TRIM35Q9UPQ4 493 aa29.67■■■□□ 2.34
CTSF-201ENST00000310325 CANXP27824 592 aaKnown RBP29.66■■■□□ 2.34
CTSF-201ENST00000310325 ZRANB1Q9UGI0 708 aa29.66■■■□□ 2.34
CTSF-201ENST00000310325 PTCH1Q13635 1447 aa29.66■■■□□ 2.34
CTSF-201ENST00000310325 MS4A1P11836 297 aa29.65■■■□□ 2.34
CTSF-201ENST00000310325 EMILIN1Q9Y6C2 1016 aa29.65■■■□□ 2.34
CTSF-201ENST00000310325 AMOTL2Q9Y2J4 779 aa29.64■■■□□ 2.33
CTSF-201ENST00000310325 IL16Q14005 1332 aa29.63■■■□□ 2.33
CTSF-201ENST00000310325 MSH5O43196 834 aa29.62■■■□□ 2.33
CTSF-201ENST00000310325 RSPH6AQ9H0K4 717 aa29.62■■■□□ 2.33
CTSF-201ENST00000310325 RIPK4P57078 832 aa29.62■■■□□ 2.33
CTSF-201ENST00000310325 PLEKHG3A1L390 1219 aa29.61■■■□□ 2.33
CTSF-201ENST00000310325 CT47B1P0C2W7 299 aaPredicted RBP29.61■■■□□ 2.33
CTSF-201ENST00000310325 CEP170BQ9Y4F5 1589 aaPredicted RBP29.6■■■□□ 2.33
CTSF-201ENST00000310325 XRN1Q8IZH2 1706 aaKnown RBP29.6■■■□□ 2.33
CTSF-201ENST00000310325 FRAT1Q92837 279 aaPredicted RBP29.59■■■□□ 2.33
CTSF-201ENST00000310325 ACEP12821 1306 aa29.59■■■□□ 2.33
CTSF-201ENST00000310325 PRKAR2BP31323 418 aa29.59■■■□□ 2.33
CTSF-201ENST00000310325 RIMS1Q86UR5 1692 aaKnown RBP29.58■■■□□ 2.33
CTSF-201ENST00000310325 NEFMP07197 916 aa29.58■■■□□ 2.33
CTSF-201ENST00000310325 IL13P35225 146 aa29.58■■■□□ 2.33
CTSF-201ENST00000310325 TTC21BQ7Z4L5 1316 aa29.58■■■□□ 2.33
CTSF-201ENST00000310325 TSR2Q969E8 191 aaKnown RBP29.57■■■□□ 2.32
CTSF-201ENST00000310325 USP6P35125 1406 aa29.57■■■□□ 2.32
CTSF-201ENST00000310325 PANK1Q8TE04 598 aa29.57■■■□□ 2.32
CTSF-201ENST00000310325 NALCNQ8IZF0 1738 aa29.55■■■□□ 2.32
CTSF-201ENST00000310325 NUTM2FA1L443 756 aa29.55■■■□□ 2.32
CTSF-201ENST00000310325 OVOS2A0A0J9YW53 1432 aa29.54■■■□□ 2.32
CTSF-201ENST00000310325 RRS1Q15050 365 aaKnown RBP29.54■■■□□ 2.32
CTSF-201ENST00000310325 OVOS2Q6IE36 1432 aa29.54■■■□□ 2.32
CTSF-201ENST00000310325 COG6Q9Y2V7 657 aa29.54■■■□□ 2.32
CTSF-201ENST00000310325 ANP32EQ9BTT0 268 aa29.54■■■□□ 2.32
CTSF-201ENST00000310325 BCL2L13Q9BXK5 485 aa29.53■■■□□ 2.32
CTSF-201ENST00000310325 HMOX1P09601 288 aa29.52■■■□□ 2.32
CTSF-201ENST00000310325 PDE4AP27815 886 aa29.52■■■□□ 2.32
CTSF-201ENST00000310325 EXOSC9Q06265 439 aaKnown RBP29.52■■■□□ 2.32
CTSF-201ENST00000310325 CLUAP1Q96AJ1 413 aa29.52■■■□□ 2.32
CTSF-201ENST00000310325 SKAP1Q86WV1 359 aa29.51■■■□□ 2.31
CTSF-201ENST00000310325 RGPD8O14715 1765 aaPredicted RBP29.5■■■□□ 2.31
CTSF-201ENST00000310325 NFE2L2Q16236 605 aa29.5■■■□□ 2.31
CTSF-201ENST00000310325 BACH2Q9BYV9 841 aa29.5■■■□□ 2.31
CTSF-201ENST00000310325 AAMPQ13685 434 aa29.49■■■□□ 2.31
CTSF-201ENST00000310325 SSH2Q76I76 1423 aa29.49■■■□□ 2.31
CTSF-201ENST00000310325 PIK3R4Q99570 1358 aa29.48■■■□□ 2.31
CTSF-201ENST00000310325 PHACTR3Q96KR7 559 aa29.48■■■□□ 2.31
CTSF-201ENST00000310325 ZNF142P52746 1687 aaPredicted RBP29.48■■■□□ 2.31
CTSF-201ENST00000310325 ANP32AP39687 249 aaKnown RBP29.47■■■□□ 2.31
CTSF-201ENST00000310325 RLBP1P12271 317 aa29.46■■■□□ 2.31
CTSF-201ENST00000310325 DLG5Q8TDM6 1919 aa29.45■■■□□ 2.31
CTSF-201ENST00000310325 TNNQ9UQP3 1299 aa29.45■■■□□ 2.31
CTSF-201ENST00000310325 ZKSCAN2Q63HK3 967 aa29.44■■■□□ 2.3
CTSF-201ENST00000310325 TTC21AQ8NDW8 1320 aa29.44■■■□□ 2.3
CTSF-201ENST00000310325 USP31Q70CQ4 1352 aa29.44■■■□□ 2.3
CTSF-201ENST00000310325 SMC4Q9NTJ3 1288 aa29.44■■■□□ 2.3
CTSF-201ENST00000310325 PEAK1Q9H792 1746 aa29.42■■■□□ 2.3
CTSF-201ENST00000310325 FMN2Q9NZ56 1722 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms