RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 ABTB2Q8N961 1025 aa14.69□□□□□ -0.06
TRIM59-201ENST00000309784 TTC21BQ7Z4L5 1316 aa14.68□□□□□ -0.06
TRIM59-201ENST00000309784 FOXO3O43524 673 aa14.68□□□□□ -0.06
TRIM59-201ENST00000309784 DIAPH1O60610 1272 aaKnown RBP14.68□□□□□ -0.06
TRIM59-201ENST00000309784 EMILIN1Q9Y6C2 1016 aa14.68□□□□□ -0.06
TRIM59-201ENST00000309784 DIP2AQ14689 1571 aa14.68□□□□□ -0.06
TRIM59-201ENST00000309784 MAPK8IP3Q9UPT6 1336 aa14.68□□□□□ -0.06
TRIM59-201ENST00000309784 ATP7BP35670 1465 aa14.68□□□□□ -0.06
TRIM59-201ENST00000309784 EDC4Q6P2E9 1401 aaKnown RBP14.67□□□□□ -0.06
TRIM59-201ENST00000309784 PLEKHG3A1L390 1219 aa14.67□□□□□ -0.06
TRIM59-201ENST00000309784 ORAI2Q96SN7 254 aa14.65□□□□□ -0.06
TRIM59-201ENST00000309784 AMPHP49418 695 aa14.65□□□□□ -0.06
TRIM59-201ENST00000309784 C19orf44Q9H6X5 657 aa14.65□□□□□ -0.06
TRIM59-201ENST00000309784 ZNF142P52746 1687 aaPredicted RBP14.64□□□□□ -0.07
TRIM59-201ENST00000309784 CD163L1Q9NR16 1453 aa14.64□□□□□ -0.07
TRIM59-201ENST00000309784 KNDC1Q76NI1 1749 aa14.64□□□□□ -0.07
TRIM59-201ENST00000309784 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.64□□□□□ -0.07
TRIM59-201ENST00000309784 HMOX1P09601 288 aa14.64□□□□□ -0.07
TRIM59-201ENST00000309784 CDCA7LQ96GN5 454 aa14.64□□□□□ -0.07
TRIM59-201ENST00000309784 POLR3AO14802 1390 aaPredicted RBP14.63□□□□□ -0.07
TRIM59-201ENST00000309784 POLKQ9UBT6 870 aa14.63□□□□□ -0.07
TRIM59-201ENST00000309784 TMEM94Q12767 1356 aa14.63□□□□□ -0.07
TRIM59-201ENST00000309784 LTV1Q96GA3 475 aaPredicted RBP14.63□□□□□ -0.07
TRIM59-201ENST00000309784 RUNDC1Q96C34 613 aa14.62□□□□□ -0.07
TRIM59-201ENST00000309784 CPSF1Q10570 1443 aaKnown RBP14.61□□□□□ -0.07
TRIM59-201ENST00000309784 TCP11L2Q8N4U5 519 aa14.61□□□□□ -0.07
TRIM59-201ENST00000309784 USP6P35125 1406 aa14.6□□□□□ -0.07
TRIM59-201ENST00000309784 GOLGA2Q08379 1002 aa14.6□□□□□ -0.07
TRIM59-201ENST00000309784 ZNF335Q9H4Z2 1342 aaPredicted RBP14.6□□□□□ -0.07
TRIM59-201ENST00000309784 ADGRL3Q9HAR2 1447 aa14.6□□□□□ -0.07
TRIM59-201ENST00000309784 TTC21AQ8NDW8 1320 aa14.59□□□□□ -0.07
TRIM59-201ENST00000309784 PNNQ9H307 717 aaKnown RBP14.59□□□□□ -0.07
TRIM59-201ENST00000309784 MSH6P52701 1360 aa14.59□□□□□ -0.07
TRIM59-201ENST00000309784 PDE3BQ13370 1112 aa14.59□□□□□ -0.07
TRIM59-201ENST00000309784 CADPS2Q86UW7 1296 aa14.59□□□□□ -0.07
TRIM59-201ENST00000309784 CDC42BPGQ6DT37 1551 aa14.59□□□□□ -0.07
TRIM59-201ENST00000309784 HAP1P54257 671 aaPredicted RBP14.58□□□□□ -0.08
TRIM59-201ENST00000309784 DDX17Q92841 729 aaKnown RBP14.57□□□□□ -0.08
TRIM59-201ENST00000309784 NKTRP30414 1462 aaKnown RBP14.57□□□□□ -0.08
TRIM59-201ENST00000309784 PRKAR2BP31323 418 aa14.57□□□□□ -0.08
TRIM59-201ENST00000309784 KRT28Q7Z3Y7 464 aa14.57□□□□□ -0.08
TRIM59-201ENST00000309784 LAS1LQ9Y4W2 734 aaKnown RBP14.56□□□□□ -0.08
TRIM59-201ENST00000309784 ANKARQ7Z5J8 1434 aa14.56□□□□□ -0.08
TRIM59-201ENST00000309784 XRN1Q8IZH2 1706 aaKnown RBP14.56□□□□□ -0.08
TRIM59-201ENST00000309784 DMRT2Q9Y5R5 561 aa14.56□□□□□ -0.08
TRIM59-201ENST00000309784 HSP90AB2PQ58FF8 381 aa14.55□□□□□ -0.08
TRIM59-201ENST00000309784 CHD2O14647 1828 aaKnown RBP14.54□□□□□ -0.08
TRIM59-201ENST00000309784 BLMP54132 1417 aaPredicted RBP14.54□□□□□ -0.08
TRIM59-201ENST00000309784 RCAN3Q9UKA8 241 aa14.54□□□□□ -0.08
TRIM59-201ENST00000309784 ITSN1Q15811 1721 aa14.54□□□□□ -0.08
TRIM59-201ENST00000309784 ADGRB2O60241 1585 aa14.54□□□□□ -0.08
TRIM59-201ENST00000309784 RIPK4P57078 832 aa14.54□□□□□ -0.08
TRIM59-201ENST00000309784 SULT6B1Q6IMI4 303 aa14.53□□□□□ -0.08
TRIM59-201ENST00000309784 LMTK3Q96Q04 1460 aa14.53□□□□□ -0.08
TRIM59-201ENST00000309784 USP32Q8NFA0 1604 aa14.53□□□□□ -0.08
TRIM59-201ENST00000309784 MAP3K19Q56UN5 1328 aa14.53□□□□□ -0.08
TRIM59-201ENST00000309784 CANXP27824 592 aaKnown RBP14.52□□□□□ -0.08
TRIM59-201ENST00000309784 RGPD8O14715 1765 aaPredicted RBP14.51□□□□□ -0.09
TRIM59-201ENST00000309784 SMG6Q86US8 1419 aaKnown RBP14.51□□□□□ -0.09
TRIM59-201ENST00000309784 FCHSD2O94868 740 aa14.51□□□□□ -0.09
TRIM59-201ENST00000309784 ZC3H6P61129 1189 aaKnown RBP14.51□□□□□ -0.09
TRIM59-201ENST00000309784 WWC1Q8IX03 1113 aa14.51□□□□□ -0.09
TRIM59-201ENST00000309784 PELP1Q8IZL8 1130 aaKnown RBP14.5□□□□□ -0.09
TRIM59-201ENST00000309784 KIF20BQ96Q89 1820 aa14.5□□□□□ -0.09
TRIM59-201ENST00000309784 EIF4A2Q14240 407 aaKnown RBP14.5□□□□□ -0.09
TRIM59-201ENST00000309784 E9PSI1 815 aa14.49□□□□□ -0.09
TRIM59-201ENST00000309784 AEBP2Q6ZN18 517 aaPredicted RBP14.49□□□□□ -0.09
TRIM59-201ENST00000309784 TMPOP42166 694 aaKnown RBP14.49□□□□□ -0.09
TRIM59-201ENST00000309784 NGEFQ8N5V2 710 aa14.49□□□□□ -0.09
TRIM59-201ENST00000309784 IL13P35225 146 aa14.48□□□□□ -0.09
TRIM59-201ENST00000309784 AATKQ6ZMQ8 1374 aa14.48□□□□□ -0.09
TRIM59-201ENST00000309784 NALCNQ8IZF0 1738 aa14.48□□□□□ -0.09
TRIM59-201ENST00000309784 NPHP3Q7Z494 1330 aa14.48□□□□□ -0.09
TRIM59-201ENST00000309784 AEBP1Q8IUX7 1158 aa14.48□□□□□ -0.09
TRIM59-201ENST00000309784 KCNH5Q8NCM2 988 aa14.48□□□□□ -0.09
TRIM59-201ENST00000309784 C1orf167Q5SNV9 1468 aa14.47□□□□□ -0.09
TRIM59-201ENST00000309784 CABLES1Q8TDN4 633 aa14.47□□□□□ -0.09
TRIM59-201ENST00000309784 PLIN1O60240 522 aa14.47□□□□□ -0.09
TRIM59-201ENST00000309784 CSB-PGBD3P0DP91 1061 aa14.47□□□□□ -0.09
TRIM59-201ENST00000309784 SLAIN2Q9P270 581 aa14.47□□□□□ -0.09
TRIM59-201ENST00000309784 INSRP06213 1382 aa14.46□□□□□ -0.09
TRIM59-201ENST00000309784 MAP2P11137 1827 aaKnown RBP14.46□□□□□ -0.09
TRIM59-201ENST00000309784 MYH16Q9H6N6 1097 aa14.46□□□□□ -0.09
TRIM59-201ENST00000309784 FLT4P35916 1363 aa14.46□□□□□ -0.09
TRIM59-201ENST00000309784 GCP02774 474 aa14.46□□□□□ -0.1
TRIM59-201ENST00000309784 SLFN5Q08AF3 891 aa14.46□□□□□ -0.1
TRIM59-201ENST00000309784 USHBP1Q8N6Y0 703 aa14.46□□□□□ -0.1
TRIM59-201ENST00000309784 OVOS2A0A0J9YW53 1432 aa14.45□□□□□ -0.1
TRIM59-201ENST00000309784 OVOS2Q6IE36 1432 aa14.45□□□□□ -0.1
TRIM59-201ENST00000309784 PHACTR3Q96KR7 559 aa14.45□□□□□ -0.1
TRIM59-201ENST00000309784 SPINK5Q9NQ38 1064 aaPredicted RBP14.45□□□□□ -0.1
TRIM59-201ENST00000309784 FMN2Q9NZ56 1722 aa14.45□□□□□ -0.1
TRIM59-201ENST00000309784 THUMPD2Q9BTF0 503 aaKnown RBP14.45□□□□□ -0.1
TRIM59-201ENST00000309784 RSPH6AQ9H0K4 717 aa14.45□□□□□ -0.1
TRIM59-201ENST00000309784 MON2Q7Z3U7 1717 aa14.45□□□□□ -0.1
TRIM59-201ENST00000309784 FRAT1Q92837 279 aaPredicted RBP14.44□□□□□ -0.1
TRIM59-201ENST00000309784 HOXC9P31274 260 aa14.44□□□□□ -0.1
TRIM59-201ENST00000309784 DUSP27Q5VZP5 1158 aa14.44□□□□□ -0.1
TRIM59-201ENST00000309784 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.44□□□□□ -0.1
TRIM59-201ENST00000309784 TSR2Q969E8 191 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms