RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 CEP152O94986 1710 aa13.85□□□□□ -0.19
PTPN7-201ENST00000309017 ZNF692Q9BU19 519 aaPredicted RBP13.84□□□□□ -0.19
PTPN7-201ENST00000309017 CALD1Q05682 793 aaKnown RBP13.84□□□□□ -0.19
PTPN7-201ENST00000309017 MCTP1Q6DN14 999 aa13.83□□□□□ -0.19
PTPN7-201ENST00000309017 KIAA1211Q6ZU35 1233 aa13.83□□□□□ -0.19
PTPN7-201ENST00000309017 ZMYND15Q9H091 742 aa13.83□□□□□ -0.19
PTPN7-201ENST00000309017 ZNF518AQ6AHZ1 1483 aa13.83□□□□□ -0.2
PTPN7-201ENST00000309017 DIAPH1O60610 1272 aaKnown RBP13.83□□□□□ -0.2
PTPN7-201ENST00000309017 BMP2KLQ5H9B9 411 aa13.83□□□□□ -0.2
PTPN7-201ENST00000309017 CHMP4BQ9H444 224 aaKnown RBP13.83□□□□□ -0.2
PTPN7-201ENST00000309017 APBB1O00213 710 aa13.83□□□□□ -0.2
PTPN7-201ENST00000309017 CCDC173Q0VFZ6 552 aa13.83□□□□□ -0.2
PTPN7-201ENST00000309017 TRIM35Q9UPQ4 493 aa13.83□□□□□ -0.2
PTPN7-201ENST00000309017 TBC1D9Q6ZT07 1266 aa13.82□□□□□ -0.2
PTPN7-201ENST00000309017 CD2BP2O95400 341 aaKnown RBP13.82□□□□□ -0.2
PTPN7-201ENST00000309017 IQSEC2Q5JU85 1478 aa13.82□□□□□ -0.2
PTPN7-201ENST00000309017 C14orf93Q9H972 538 aaKnown RBP13.82□□□□□ -0.2
PTPN7-201ENST00000309017 RTEL1-TNFRSF6BF6WH68 1400 aa13.82□□□□□ -0.2
PTPN7-201ENST00000309017 SBNO2Q9Y2G9 1366 aa13.81□□□□□ -0.2
PTPN7-201ENST00000309017 CAVIN1Q6NZI2 390 aaKnown RBP13.81□□□□□ -0.2
PTPN7-201ENST00000309017 GAS2L2Q8NHY3 880 aa13.81□□□□□ -0.2
PTPN7-201ENST00000309017 TPM2P07951 284 aa13.81□□□□□ -0.2
PTPN7-201ENST00000309017 GCC1Q96CN9 775 aa13.8□□□□□ -0.2
PTPN7-201ENST00000309017 ABCC1P33527 1531 aa13.8□□□□□ -0.2
PTPN7-201ENST00000309017 CDC45O75419 566 aa13.8□□□□□ -0.2
PTPN7-201ENST00000309017 MINK1Q8N4C8 1332 aaPredicted RBP13.8□□□□□ -0.2
PTPN7-201ENST00000309017 ABCC11Q96J66 1382 aa13.8□□□□□ -0.2
PTPN7-201ENST00000309017 ABCA6Q8N139 1617 aa13.8□□□□□ -0.2
PTPN7-201ENST00000309017 THUMPD2Q9BTF0 503 aaKnown RBP13.8□□□□□ -0.2
PTPN7-201ENST00000309017 TERF2IPQ9NYB0 399 aa13.8□□□□□ -0.2
PTPN7-201ENST00000309017 MAP3K4Q9Y6R4 1608 aa13.8□□□□□ -0.2
PTPN7-201ENST00000309017 ZSCAN30Q86W11 494 aa13.79□□□□□ -0.2
PTPN7-201ENST00000309017 ARID3AQ99856 593 aa13.79□□□□□ -0.2
PTPN7-201ENST00000309017 BAG4O95429 457 aaKnown RBP13.79□□□□□ -0.2
PTPN7-201ENST00000309017 HMOX1P09601 288 aa13.79□□□□□ -0.2
PTPN7-201ENST00000309017 PRKAR2BP31323 418 aa13.79□□□□□ -0.2
PTPN7-201ENST00000309017 FOXD4L5Q5VV16 416 aaPredicted RBP13.79□□□□□ -0.2
PTPN7-201ENST00000309017 FOXD4L4Q8WXT5 416 aaPredicted RBP13.79□□□□□ -0.2
PTPN7-201ENST00000309017 ANKRD36BQ8N2N9 1353 aa13.78□□□□□ -0.2
PTPN7-201ENST00000309017 MYOM2P54296 1465 aa13.78□□□□□ -0.2
PTPN7-201ENST00000309017 RBM10P98175 930 aaKnown RBP13.78□□□□□ -0.2
PTPN7-201ENST00000309017 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.78□□□□□ -0.2
PTPN7-201ENST00000309017 ALDH1L2Q3SY69 923 aa13.77□□□□□ -0.21
PTPN7-201ENST00000309017 R3HCC1Q9Y3T6 440 aaKnown RBP13.77□□□□□ -0.21
PTPN7-201ENST00000309017 NSD2O96028 1365 aa13.77□□□□□ -0.21
PTPN7-201ENST00000309017 VGFO15240 615 aaPredicted RBP13.77□□□□□ -0.21
PTPN7-201ENST00000309017 KLHL40Q2TBA0 621 aa13.77□□□□□ -0.21
PTPN7-201ENST00000309017 HDGFL2Q7Z4V5 671 aaPredicted RBP13.77□□□□□ -0.21
PTPN7-201ENST00000309017 ZBTB7CA1YPR0 619 aa13.76□□□□□ -0.21
PTPN7-201ENST00000309017 CASC1Q6TDU7 716 aa13.76□□□□□ -0.21
PTPN7-201ENST00000309017 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.76□□□□□ -0.21
PTPN7-201ENST00000309017 PLEKHF1Q96S99 279 aa13.76□□□□□ -0.21
PTPN7-201ENST00000309017 FAM13BQ9NYF5 915 aa13.76□□□□□ -0.21
PTPN7-201ENST00000309017 TET3O43151 1660 aa13.76□□□□□ -0.21
PTPN7-201ENST00000309017 IL16Q14005 1332 aa13.76□□□□□ -0.21
PTPN7-201ENST00000309017 DDIT3P35638 169 aa13.76□□□□□ -0.21
PTPN7-201ENST00000309017 NUCB2P80303 420 aa13.76□□□□□ -0.21
PTPN7-201ENST00000309017 SHROOM2Q13796 1616 aa13.75□□□□□ -0.21
PTPN7-201ENST00000309017 CYB5RLQ6IPT4 315 aa13.75□□□□□ -0.21
PTPN7-201ENST00000309017 ZFYVE16Q7Z3T8 1539 aa13.75□□□□□ -0.21
PTPN7-201ENST00000309017 SHPRHQ149N8 1683 aa13.75□□□□□ -0.21
PTPN7-201ENST00000309017 CFAP65Q6ZU64 1925 aaKnown RBP13.75□□□□□ -0.21
PTPN7-201ENST00000309017 PRPF40AO75400 957 aaKnown RBP13.75□□□□□ -0.21
PTPN7-201ENST00000309017 RABEP1Q15276 862 aa13.75□□□□□ -0.21
PTPN7-201ENST00000309017 CD109Q6YHK3 1445 aa13.75□□□□□ -0.21
PTPN7-201ENST00000309017 PTMAP06454 111 aaKnown RBP13.75□□□□□ -0.21
PTPN7-201ENST00000309017 TRHP20396 242 aaPredicted RBP13.75□□□□□ -0.21
PTPN7-201ENST00000309017 FBLN1P23142 703 aa13.75□□□□□ -0.21
PTPN7-201ENST00000309017 NCBP3Q53F19 620 aaKnown RBP13.75□□□□□ -0.21
PTPN7-201ENST00000309017 KIF2CQ99661 725 aa13.75□□□□□ -0.21
PTPN7-201ENST00000309017 FANCAO15360 1455 aa13.74□□□□□ -0.21
PTPN7-201ENST00000309017 ERCC6L2Q5T890 1561 aa13.74□□□□□ -0.21
PTPN7-201ENST00000309017 NCOA3Q9Y6Q9 1424 aa13.74□□□□□ -0.21
PTPN7-201ENST00000309017 ATP7AQ04656 1500 aa13.74□□□□□ -0.21
PTPN7-201ENST00000309017 ZBTB7BO15156 539 aaPredicted RBP13.74□□□□□ -0.21
PTPN7-201ENST00000309017 NPM1P06748 294 aaKnown RBP eCLIP13.74□□□□□ -0.21
PTPN7-201ENST00000309017 KIAA1210Q9ULL0 1709 aa13.74□□□□□ -0.21
PTPN7-201ENST00000309017 A0A1W2PP64 1363 aa13.73□□□□□ -0.21
PTPN7-201ENST00000309017 FYB1O15117 783 aa13.73□□□□□ -0.21
PTPN7-201ENST00000309017 ST18O60284 1047 aa13.73□□□□□ -0.21
PTPN7-201ENST00000309017 ADGRL1O94910 1474 aa13.73□□□□□ -0.21
PTPN7-201ENST00000309017 TPRNQ4KMQ1 711 aa13.73□□□□□ -0.21
PTPN7-201ENST00000309017 TSPYL6Q8N831 410 aa13.73□□□□□ -0.21
PTPN7-201ENST00000309017 KIF1BO60333 1816 aa13.72□□□□□ -0.21
PTPN7-201ENST00000309017 TWISTNBQ3B726 338 aaPredicted RBP13.72□□□□□ -0.21
PTPN7-201ENST00000309017 ZSCAN23Q3MJ62 389 aa13.72□□□□□ -0.21
PTPN7-201ENST00000309017 CFAP44Q96MT7 982 aa13.72□□□□□ -0.21
PTPN7-201ENST00000309017 PDCL3Q9H2J4 239 aa13.72□□□□□ -0.21
PTPN7-201ENST00000309017 FCHSD2O94868 740 aa13.71□□□□□ -0.21
PTPN7-201ENST00000309017 GNAI1P63096 354 aa13.71□□□□□ -0.21
PTPN7-201ENST00000309017 XPCQ01831 940 aaPredicted RBP13.71□□□□□ -0.21
PTPN7-201ENST00000309017 INTS3Q68E01 1043 aaKnown RBP13.71□□□□□ -0.21
PTPN7-201ENST00000309017 RNF214Q8ND24 703 aa13.71□□□□□ -0.21
PTPN7-201ENST00000309017 RBM27Q9P2N5 1060 aaKnown RBP13.71□□□□□ -0.21
PTPN7-201ENST00000309017 PPIP5K1Q6PFW1 1433 aa13.71□□□□□ -0.21
PTPN7-201ENST00000309017 NOL8Q76FK4 1167 aaKnown RBP13.71□□□□□ -0.21
PTPN7-201ENST00000309017 PRAM1Q96QH2 718 aa13.71□□□□□ -0.22
PTPN7-201ENST00000309017 PPP1R9BQ96SB3 815 aa13.71□□□□□ -0.22
PTPN7-201ENST00000309017 API5Q9BZZ5 524 aaKnown RBP13.71□□□□□ -0.22
PTPN7-201ENST00000309017 DNTTIP2Q5QJE6 756 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms