RNA–Protein interactions for RNA: ENST00000307588.7

CCDC110-201, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC110, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-201ENST00000307588 APAF1O14727 1248 aa21.72■■□□□ 1.07
CCDC110-201ENST00000307588 ACEP12821 1306 aa21.72■■□□□ 1.07
CCDC110-201ENST00000307588 RNF123Q5XPI4 1314 aa21.72■■□□□ 1.07
CCDC110-201ENST00000307588 FBLN1P23142 703 aa21.7■■□□□ 1.06
CCDC110-201ENST00000307588 RGPD8O14715 1765 aaPredicted RBP21.7■■□□□ 1.06
CCDC110-201ENST00000307588 PNPLA6Q8IY17 1366 aa21.7■■□□□ 1.06
CCDC110-201ENST00000307588 USP6P35125 1406 aa21.68■■□□□ 1.06
CCDC110-201ENST00000307588 SSH2Q76I76 1423 aa21.67■■□□□ 1.06
CCDC110-201ENST00000307588 POLKQ9UBT6 870 aa21.67■■□□□ 1.06
CCDC110-201ENST00000307588 NALCNQ8IZF0 1738 aa21.67■■□□□ 1.06
CCDC110-201ENST00000307588 FMN2Q9NZ56 1722 aa21.67■■□□□ 1.06
CCDC110-201ENST00000307588 IQSEC2Q5JU85 1478 aa21.67■■□□□ 1.06
CCDC110-201ENST00000307588 TTC21BQ7Z4L5 1316 aa21.66■■□□□ 1.06
CCDC110-201ENST00000307588 ANKARQ7Z5J8 1434 aa21.65■■□□□ 1.06
CCDC110-201ENST00000307588 MAP2P11137 1827 aaKnown RBP21.65■■□□□ 1.06
CCDC110-201ENST00000307588 RUNDC1Q96C34 613 aa21.65■■□□□ 1.06
CCDC110-201ENST00000307588 RBM33Q96EV2 1170 aaKnown RBP21.64■■□□□ 1.06
CCDC110-201ENST00000307588 PMFBP1Q8TBY8 1022 aa21.64■■□□□ 1.05
CCDC110-201ENST00000307588 AATKQ6ZMQ8 1374 aa21.63■■□□□ 1.05
CCDC110-201ENST00000307588 U2AF1L5P0DN76 240 aaPredicted RBP21.62■■□□□ 1.05
CCDC110-201ENST00000307588 U2AF1Q01081 240 aaKnown RBP eCLIP21.62■■□□□ 1.05
CCDC110-201ENST00000307588 COG3Q96JB2 828 aa21.62■■□□□ 1.05
CCDC110-201ENST00000307588 DUSP27Q5VZP5 1158 aa21.62■■□□□ 1.05
CCDC110-201ENST00000307588 NWD1Q149M9 1564 aa21.61■■□□□ 1.05
CCDC110-201ENST00000307588 GOLGA2Q08379 1002 aa21.61■■□□□ 1.05
CCDC110-201ENST00000307588 NGEFQ8N5V2 710 aa21.61■■□□□ 1.05
CCDC110-201ENST00000307588 SPINK5Q9NQ38 1064 aaPredicted RBP21.61■■□□□ 1.05
CCDC110-201ENST00000307588 TRMT2AQ8IZ69 625 aaKnown RBP21.61■■□□□ 1.05
CCDC110-201ENST00000307588 RCAN3Q9UKA8 241 aa21.61■■□□□ 1.05
CCDC110-201ENST00000307588 DMRT2Q9Y5R5 561 aa21.61■■□□□ 1.05
CCDC110-201ENST00000307588 EMILIN1Q9Y6C2 1016 aa21.61■■□□□ 1.05
CCDC110-201ENST00000307588 OVOS2A0A0J9YW53 1432 aa21.61■■□□□ 1.05
CCDC110-201ENST00000307588 OVOS2Q6IE36 1432 aa21.61■■□□□ 1.05
CCDC110-201ENST00000307588 TCP11L2Q8N4U5 519 aa21.6■■□□□ 1.05
CCDC110-201ENST00000307588 SLFN5Q08AF3 891 aa21.6■■□□□ 1.05
CCDC110-201ENST00000307588 DIAPH1O60610 1272 aaKnown RBP21.59■■□□□ 1.05
CCDC110-201ENST00000307588 ERICH6BQ5W0A0 696 aa21.59■■□□□ 1.05
CCDC110-201ENST00000307588 PLEKHF1Q96S99 279 aa21.59■■□□□ 1.05
CCDC110-201ENST00000307588 PHF23Q9BUL5 403 aaPredicted RBP21.59■■□□□ 1.05
CCDC110-201ENST00000307588 ADGRL3Q9HAR2 1447 aa21.59■■□□□ 1.05
CCDC110-201ENST00000307588 WWC1Q8IX03 1113 aa21.58■■□□□ 1.05
CCDC110-201ENST00000307588 U2SURPO15042 1029 aaKnown RBP21.58■■□□□ 1.04
CCDC110-201ENST00000307588 CDK12Q9NYV4 1490 aaPredicted RBP21.57■■□□□ 1.04
CCDC110-201ENST00000307588 KDM4FA0A1W2PPD8 638 aa21.57■■□□□ 1.04
CCDC110-201ENST00000307588 RRP7AQ9Y3A4 280 aaKnown RBP21.57■■□□□ 1.04
CCDC110-201ENST00000307588 PPM1GO15355 546 aaPredicted RBP21.57■■□□□ 1.04
CCDC110-201ENST00000307588 RRS1Q15050 365 aaKnown RBP21.56■■□□□ 1.04
CCDC110-201ENST00000307588 NGDNQ8NEJ9 315 aaKnown RBP21.56■■□□□ 1.04
CCDC110-201ENST00000307588 TTC21AQ8NDW8 1320 aa21.55■■□□□ 1.04
CCDC110-201ENST00000307588 USP31Q70CQ4 1352 aa21.54■■□□□ 1.04
CCDC110-201ENST00000307588 RRP1P56182 461 aaKnown RBP21.54■■□□□ 1.04
CCDC110-201ENST00000307588 NEUROD2Q15784 382 aa21.53■■□□□ 1.04
CCDC110-201ENST00000307588 PIK3C2AO00443 1686 aa21.53■■□□□ 1.04
CCDC110-201ENST00000307588 IL13P35225 146 aa21.53■■□□□ 1.04
CCDC110-201ENST00000307588 NCBP3Q53F19 620 aaKnown RBP21.52■■□□□ 1.04
CCDC110-201ENST00000307588 CCDC27Q2M243 656 aa21.52■■□□□ 1.04
CCDC110-201ENST00000307588 E9PSI1 815 aa21.51■■□□□ 1.03
CCDC110-201ENST00000307588 HSPA2P54652 639 aa21.5■■□□□ 1.03
CCDC110-201ENST00000307588 PPP4R2Q9NY27 417 aa21.5■■□□□ 1.03
CCDC110-201ENST00000307588 LRRC7Q96NW7 1537 aa21.49■■□□□ 1.03
CCDC110-201ENST00000307588 RSPH6AQ9H0K4 717 aa21.49■■□□□ 1.03
CCDC110-201ENST00000307588 PHF8Q9UPP1 1060 aa21.49■■□□□ 1.03
CCDC110-201ENST00000307588 PEAK1Q9H792 1746 aa21.49■■□□□ 1.03
CCDC110-201ENST00000307588 MARF1Q9Y4F3 1742 aaKnown RBP21.49■■□□□ 1.03
CCDC110-201ENST00000307588 STRCP1A6NGW2 1772 aa21.48■■□□□ 1.03
CCDC110-201ENST00000307588 FCHSD2O94868 740 aa21.48■■□□□ 1.03
CCDC110-201ENST00000307588 TMPOP42166 694 aaKnown RBP21.47■■□□□ 1.03
CCDC110-201ENST00000307588 WDR63Q8IWG1 891 aa21.47■■□□□ 1.03
CCDC110-201ENST00000307588 PROSER2Q86WR7 435 aaPredicted RBP21.46■■□□□ 1.03
CCDC110-201ENST00000307588 USP54Q70EL1 1684 aa21.45■■□□□ 1.02
CCDC110-201ENST00000307588 LMTK3Q96Q04 1460 aa21.45■■□□□ 1.02
CCDC110-201ENST00000307588 TRIM35Q9UPQ4 493 aa21.45■■□□□ 1.02
CCDC110-201ENST00000307588 C14orf37Q86TY3 774 aa21.45■■□□□ 1.02
CCDC110-201ENST00000307588 MAPK8IP3Q9UPT6 1336 aa21.44■■□□□ 1.02
CCDC110-201ENST00000307588 HMOX1P09601 288 aa21.43■■□□□ 1.02
CCDC110-201ENST00000307588 PRKAR2BP31323 418 aa21.43■■□□□ 1.02
CCDC110-201ENST00000307588 PLIN1O60240 522 aa21.43■■□□□ 1.02
CCDC110-201ENST00000307588 ESCO1Q5FWF5 840 aa21.43■■□□□ 1.02
CCDC110-201ENST00000307588 PNNQ9H307 717 aaKnown RBP21.42■■□□□ 1.02
CCDC110-201ENST00000307588 EIF4A2Q14240 407 aaKnown RBP21.42■■□□□ 1.02
CCDC110-201ENST00000307588 MAP3K19Q56UN5 1328 aa21.42■■□□□ 1.02
CCDC110-201ENST00000307588 SOX12O15370 315 aa21.42■■□□□ 1.02
CCDC110-201ENST00000307588 PHACTR3Q96KR7 559 aa21.42■■□□□ 1.02
CCDC110-201ENST00000307588 NLRP6P59044 892 aa21.41■■□□□ 1.02
CCDC110-201ENST00000307588 HSP90AB2PQ58FF8 381 aa21.41■■□□□ 1.02
CCDC110-201ENST00000307588 ORAI2Q96SN7 254 aa21.41■■□□□ 1.02
CCDC110-201ENST00000307588 B4GALNT3Q6L9W6 998 aa21.4■■□□□ 1.02
CCDC110-201ENST00000307588 NUTM2GQ5VZR2 741 aa21.4■■□□□ 1.02
CCDC110-201ENST00000307588 STRCQ7RTU9 1775 aa21.4■■□□□ 1.02
CCDC110-201ENST00000307588 ABTB2Q8N961 1025 aa21.39■■□□□ 1.01
CCDC110-201ENST00000307588 C19orf44Q9H6X5 657 aa21.39■■□□□ 1.01
CCDC110-201ENST00000307588 RGPD1P0DJD0 1748 aa21.38■■□□□ 1.01
CCDC110-201ENST00000307588 RIPK4P57078 832 aa21.38■■□□□ 1.01
CCDC110-201ENST00000307588 TMEM94Q12767 1356 aa21.38■■□□□ 1.01
CCDC110-201ENST00000307588 PAK3O75914 559 aaPredicted RBP21.38■■□□□ 1.01
CCDC110-201ENST00000307588 EXOC6Q8TAG9 804 aa21.37■■□□□ 1.01
CCDC110-201ENST00000307588 C1orf167Q5SNV9 1468 aa21.37■■□□□ 1.01
CCDC110-201ENST00000307588 SBNO1A3KN83 1393 aa21.37■■□□□ 1.01
CCDC110-201ENST00000307588 PSME1Q06323 249 aa21.35■■□□□ 1.01
CCDC110-201ENST00000307588 C20orf194Q5TEA3 1177 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms