RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 APBB1O00213 710 aa13.53□□□□□ -0.24
PCDHGC4-201ENST00000306593 WASLO00401 505 aaPredicted RBP13.53□□□□□ -0.24
PCDHGC4-201ENST00000306593 GAS2L2Q8NHY3 880 aa13.53□□□□□ -0.24
PCDHGC4-201ENST00000306593 PLEKHH1Q9ULM0 1364 aa13.53□□□□□ -0.24
PCDHGC4-201ENST00000306593 TWISTNBQ3B726 338 aaPredicted RBP13.52□□□□□ -0.24
PCDHGC4-201ENST00000306593 NCBP3Q53F19 620 aaKnown RBP13.52□□□□□ -0.24
PCDHGC4-201ENST00000306593 SLC4A3P48751 1232 aa13.52□□□□□ -0.25
PCDHGC4-201ENST00000306593 BCORL1Q5H9F3 1711 aa13.52□□□□□ -0.25
PCDHGC4-201ENST00000306593 LAMC1P11047 1609 aa13.51□□□□□ -0.25
PCDHGC4-201ENST00000306593 POLR1AO95602 1720 aaPredicted RBP13.51□□□□□ -0.25
PCDHGC4-201ENST00000306593 NPATQ14207 1427 aa13.51□□□□□ -0.25
PCDHGC4-201ENST00000306593 DDX11L8A8MPP1 907 aa13.51□□□□□ -0.25
PCDHGC4-201ENST00000306593 MSH5O43196 834 aa13.51□□□□□ -0.25
PCDHGC4-201ENST00000306593 GSE1Q14687 1217 aa13.51□□□□□ -0.25
PCDHGC4-201ENST00000306593 C22orf23Q9BZE7 217 aa13.51□□□□□ -0.25
PCDHGC4-201ENST00000306593 TSPYL4Q9UJ04 414 aa13.5□□□□□ -0.25
PCDHGC4-201ENST00000306593 CLASP1Q7Z460 1538 aa13.5□□□□□ -0.25
PCDHGC4-201ENST00000306593 ST18O60284 1047 aa13.5□□□□□ -0.25
PCDHGC4-201ENST00000306593 KIAA1211Q6ZU35 1233 aa13.5□□□□□ -0.25
PCDHGC4-201ENST00000306593 IFT57Q9NWB7 429 aa13.5□□□□□ -0.25
PCDHGC4-201ENST00000306593 WAPLQ7Z5K2 1190 aa13.5□□□□□ -0.25
PCDHGC4-201ENST00000306593 LTV1Q96GA3 475 aaPredicted RBP13.5□□□□□ -0.25
PCDHGC4-201ENST00000306593 GPATCH3Q96I76 525 aa13.49□□□□□ -0.25
PCDHGC4-201ENST00000306593 ZFYVE9O95405 1425 aa13.49□□□□□ -0.25
PCDHGC4-201ENST00000306593 MAGI2Q86UL8 1455 aa13.49□□□□□ -0.25
PCDHGC4-201ENST00000306593 LNPKQ9C0E8 428 aa13.49□□□□□ -0.25
PCDHGC4-201ENST00000306593 TAOK2Q9UL54 1235 aa13.49□□□□□ -0.25
PCDHGC4-201ENST00000306593 KIF1BO60333 1816 aa13.49□□□□□ -0.25
PCDHGC4-201ENST00000306593 CHMP5Q9NZZ3 219 aa13.48□□□□□ -0.25
PCDHGC4-201ENST00000306593 REC8O95072 547 aa13.48□□□□□ -0.25
PCDHGC4-201ENST00000306593 RIMS2Q9UQ26 1411 aa13.48□□□□□ -0.25
PCDHGC4-201ENST00000306593 NLRP6P59044 892 aa13.48□□□□□ -0.25
PCDHGC4-201ENST00000306593 C1orf141Q5JVX7 400 aa13.48□□□□□ -0.25
PCDHGC4-201ENST00000306593 YTHDC2Q9H6S0 1430 aaKnown RBP13.47□□□□□ -0.25
PCDHGC4-201ENST00000306593 FYB1O15117 783 aa13.47□□□□□ -0.25
PCDHGC4-201ENST00000306593 KCNJ4P48050 445 aa13.47□□□□□ -0.25
PCDHGC4-201ENST00000306593 TEFQ10587 303 aa13.47□□□□□ -0.25
PCDHGC4-201ENST00000306593 SULT6B1Q6IMI4 303 aa13.47□□□□□ -0.25
PCDHGC4-201ENST00000306593 EFCAB6Q5THR3 1501 aa13.47□□□□□ -0.25
PCDHGC4-201ENST00000306593 HECW2Q9P2P5 1572 aa13.47□□□□□ -0.25
PCDHGC4-201ENST00000306593 TNRQ92752 1358 aa13.46□□□□□ -0.25
PCDHGC4-201ENST00000306593 CDC45O75419 566 aa13.46□□□□□ -0.25
PCDHGC4-201ENST00000306593 PSME1Q06323 249 aa13.46□□□□□ -0.25
PCDHGC4-201ENST00000306593 NFKBIBQ15653 356 aa13.46□□□□□ -0.25
PCDHGC4-201ENST00000306593 SSH1Q8WYL5 1049 aa13.46□□□□□ -0.25
PCDHGC4-201ENST00000306593 SPHKAPQ2M3C7 1700 aa13.46□□□□□ -0.25
PCDHGC4-201ENST00000306593 ERVK-7P63135 1459 aa13.46□□□□□ -0.26
PCDHGC4-201ENST00000306593 INTS3Q68E01 1043 aaKnown RBP13.46□□□□□ -0.26
PCDHGC4-201ENST00000306593 GOLGA6L3A6NEY3 463 aa13.45□□□□□ -0.26
PCDHGC4-201ENST00000306593 TRIM6-TRIM34B2RNG4 842 aa13.45□□□□□ -0.26
PCDHGC4-201ENST00000306593 CSB-PGBD3P0DP91 1061 aa13.45□□□□□ -0.26
PCDHGC4-201ENST00000306593 SKOR2Q2VWA4 1001 aaPredicted RBP13.45□□□□□ -0.26
PCDHGC4-201ENST00000306593 ABCA9Q8IUA7 1624 aa13.45□□□□□ -0.26
PCDHGC4-201ENST00000306593 CCDC30Q5VVM6 783 aa13.44□□□□□ -0.26
PCDHGC4-201ENST00000306593 A0A1W2PP64 1363 aa13.44□□□□□ -0.26
PCDHGC4-201ENST00000306593 FKBP5Q13451 457 aaPredicted RBP13.44□□□□□ -0.26
PCDHGC4-201ENST00000306593 CLTCL1P53675 1640 aa13.44□□□□□ -0.26
PCDHGC4-201ENST00000306593 GNAI3P08754 354 aa13.44□□□□□ -0.26
PCDHGC4-201ENST00000306593 RRS1Q15050 365 aaKnown RBP13.43□□□□□ -0.26
PCDHGC4-201ENST00000306593 TPRNQ4KMQ1 711 aa13.43□□□□□ -0.26
PCDHGC4-201ENST00000306593 NME9Q86XW9 330 aa13.43□□□□□ -0.26
PCDHGC4-201ENST00000306593 TMEM57Q8N5G2 664 aa13.43□□□□□ -0.26
PCDHGC4-201ENST00000306593 MAP3K4Q9Y6R4 1608 aa13.43□□□□□ -0.26
PCDHGC4-201ENST00000306593 MADDQ8WXG6 1647 aa13.43□□□□□ -0.26
PCDHGC4-201ENST00000306593 CCT4P50991 539 aaKnown RBP13.42□□□□□ -0.26
PCDHGC4-201ENST00000306593 CHD1LQ86WJ1 897 aa13.42□□□□□ -0.26
PCDHGC4-201ENST00000306593 TTC21BQ7Z4L5 1316 aa13.42□□□□□ -0.26
PCDHGC4-201ENST00000306593 HSP90AB4PQ58FF6 505 aa13.42□□□□□ -0.26
PCDHGC4-201ENST00000306593 ABTB2Q8N961 1025 aa13.42□□□□□ -0.26
PCDHGC4-201ENST00000306593 TRIM27P14373 513 aa13.41□□□□□ -0.26
PCDHGC4-201ENST00000306593 SLC26A8Q96RN1 970 aa13.41□□□□□ -0.26
PCDHGC4-201ENST00000306593 ARHGAP45Q92619 1136 aa13.41□□□□□ -0.26
PCDHGC4-201ENST00000306593 EMILIN1Q9Y6C2 1016 aa13.41□□□□□ -0.26
PCDHGC4-201ENST00000306593 PPIP5K1Q6PFW1 1433 aa13.4□□□□□ -0.26
PCDHGC4-201ENST00000306593 RPAP2Q8IXW5 612 aaPredicted RBP13.4□□□□□ -0.26
PCDHGC4-201ENST00000306593 E9PCH4 1651 aa13.4□□□□□ -0.26
PCDHGC4-201ENST00000306593 LMTK2Q8IWU2 1503 aa13.4□□□□□ -0.26
PCDHGC4-201ENST00000306593 UGGT1Q9NYU2 1555 aa13.39□□□□□ -0.27
PCDHGC4-201ENST00000306593 SYAP1Q96A49 352 aaPredicted RBP13.39□□□□□ -0.27
PCDHGC4-201ENST00000306593 HDAC1Q13547 482 aaPredicted RBP13.39□□□□□ -0.27
PCDHGC4-201ENST00000306593 DDX58O95786 925 aaKnown RBP13.39□□□□□ -0.27
PCDHGC4-201ENST00000306593 ARHGAP31Q2M1Z3 1444 aa13.39□□□□□ -0.27
PCDHGC4-201ENST00000306593 ABCC3O15438 1527 aa13.38□□□□□ -0.27
PCDHGC4-201ENST00000306593 ANKLE2Q86XL3 938 aa13.38□□□□□ -0.27
PCDHGC4-201ENST00000306593 RNF17Q9BXT8 1623 aaKnown RBP13.38□□□□□ -0.27
PCDHGC4-201ENST00000306593 IGHDP01880 384 aa13.38□□□□□ -0.27
PCDHGC4-201ENST00000306593 GZF1Q9H116 711 aaPredicted RBP13.38□□□□□ -0.27
PCDHGC4-201ENST00000306593 SLC4A2P04920 1241 aa13.38□□□□□ -0.27
PCDHGC4-201ENST00000306593 INO80Q9ULG1 1556 aaPredicted RBP13.37□□□□□ -0.27
PCDHGC4-201ENST00000306593 GNAI2P04899 355 aa13.37□□□□□ -0.27
PCDHGC4-201ENST00000306593 FGD1P98174 961 aa13.37□□□□□ -0.27
PCDHGC4-201ENST00000306593 TTC21AQ8NDW8 1320 aa13.37□□□□□ -0.27
PCDHGC4-201ENST00000306593 PTMAP06454 111 aaKnown RBP13.37□□□□□ -0.27
PCDHGC4-201ENST00000306593 PLEKHO1Q53GL0 409 aaPredicted RBP13.37□□□□□ -0.27
PCDHGC4-201ENST00000306593 RILPL2Q969X0 211 aa13.37□□□□□ -0.27
PCDHGC4-201ENST00000306593 KDM2BQ8NHM5 1336 aa13.37□□□□□ -0.27
PCDHGC4-201ENST00000306593 UBTFL1P0CB47 393 aaPredicted RBP13.36□□□□□ -0.27
PCDHGC4-201ENST00000306593 EIF2S2P20042 333 aaKnown RBP13.36□□□□□ -0.27
PCDHGC4-201ENST00000306593 RUFY2Q8WXA3 655 aa13.36□□□□□ -0.27
PCDHGC4-201ENST00000306593 ZNF521Q96K83 1311 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms